Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032268: regulation of cellular protein metabolic process0.00E+00
2GO:0010200: response to chitin2.62E-06
3GO:0010438: cellular response to sulfur starvation3.44E-06
4GO:0009751: response to salicylic acid6.24E-06
5GO:0030162: regulation of proteolysis1.43E-05
6GO:0009611: response to wounding2.72E-05
7GO:0042542: response to hydrogen peroxide3.98E-05
8GO:0051973: positive regulation of telomerase activity4.18E-05
9GO:0080164: regulation of nitric oxide metabolic process4.18E-05
10GO:0055063: sulfate ion homeostasis4.18E-05
11GO:0046500: S-adenosylmethionine metabolic process4.18E-05
12GO:0071497: cellular response to freezing1.04E-04
13GO:0051592: response to calcium ion1.04E-04
14GO:0015709: thiosulfate transport1.04E-04
15GO:0071422: succinate transmembrane transport1.04E-04
16GO:0009753: response to jasmonic acid1.16E-04
17GO:2000022: regulation of jasmonic acid mediated signaling pathway1.31E-04
18GO:0009873: ethylene-activated signaling pathway1.60E-04
19GO:0006355: regulation of transcription, DNA-templated1.76E-04
20GO:0010581: regulation of starch biosynthetic process1.78E-04
21GO:0080168: abscisic acid transport1.78E-04
22GO:0010288: response to lead ion1.78E-04
23GO:0019419: sulfate reduction1.78E-04
24GO:0009743: response to carbohydrate2.63E-04
25GO:0015729: oxaloacetate transport2.63E-04
26GO:0046345: abscisic acid catabolic process3.53E-04
27GO:0071423: malate transmembrane transport4.50E-04
28GO:0006544: glycine metabolic process4.50E-04
29GO:0009737: response to abscisic acid5.17E-04
30GO:0009723: response to ethylene5.19E-04
31GO:0035435: phosphate ion transmembrane transport5.51E-04
32GO:0047484: regulation of response to osmotic stress5.51E-04
33GO:0006563: L-serine metabolic process5.51E-04
34GO:0006751: glutathione catabolic process5.51E-04
35GO:0009612: response to mechanical stimulus6.58E-04
36GO:0045454: cell redox homeostasis7.07E-04
37GO:0008272: sulfate transport7.69E-04
38GO:0010038: response to metal ion7.69E-04
39GO:0010439: regulation of glucosinolate biosynthetic process8.84E-04
40GO:2000070: regulation of response to water deprivation8.84E-04
41GO:0031347: regulation of defense response9.18E-04
42GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.18E-04
43GO:0030154: cell differentiation9.20E-04
44GO:0009733: response to auxin9.62E-04
45GO:0048574: long-day photoperiodism, flowering1.00E-03
46GO:0044030: regulation of DNA methylation1.00E-03
47GO:2000031: regulation of salicylic acid mediated signaling pathway1.00E-03
48GO:0010099: regulation of photomorphogenesis1.00E-03
49GO:0009651: response to salt stress1.14E-03
50GO:0035999: tetrahydrofolate interconversion1.25E-03
51GO:0009409: response to cold1.27E-03
52GO:0006357: regulation of transcription from RNA polymerase II promoter1.29E-03
53GO:0000103: sulfate assimilation1.39E-03
54GO:1903507: negative regulation of nucleic acid-templated transcription1.53E-03
55GO:0000272: polysaccharide catabolic process1.53E-03
56GO:0010015: root morphogenesis1.53E-03
57GO:0009738: abscisic acid-activated signaling pathway1.79E-03
58GO:0010540: basipetal auxin transport1.97E-03
59GO:0034605: cellular response to heat1.97E-03
60GO:0010167: response to nitrate2.13E-03
61GO:0007623: circadian rhythm2.42E-03
62GO:0019344: cysteine biosynthetic process2.46E-03
63GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.71E-03
64GO:0009739: response to gibberellin2.71E-03
65GO:0040007: growth3.15E-03
66GO:0006351: transcription, DNA-templated3.47E-03
67GO:0000271: polysaccharide biosynthetic process3.71E-03
68GO:0009658: chloroplast organization3.73E-03
69GO:0045489: pectin biosynthetic process3.91E-03
70GO:0010182: sugar mediated signaling pathway3.91E-03
71GO:0009741: response to brassinosteroid3.91E-03
72GO:0010268: brassinosteroid homeostasis3.91E-03
73GO:0009646: response to absence of light4.11E-03
74GO:0009414: response to water deprivation4.41E-03
75GO:0002229: defense response to oomycetes4.51E-03
76GO:0016132: brassinosteroid biosynthetic process4.51E-03
77GO:0009639: response to red or far red light5.15E-03
78GO:0016125: sterol metabolic process5.15E-03
79GO:0001666: response to hypoxia5.81E-03
80GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.04E-03
81GO:0010411: xyloglucan metabolic process6.50E-03
82GO:0048573: photoperiodism, flowering6.50E-03
83GO:0009408: response to heat6.79E-03
84GO:0048527: lateral root development7.72E-03
85GO:0046686: response to cadmium ion7.97E-03
86GO:0006865: amino acid transport7.97E-03
87GO:0045087: innate immune response8.23E-03
88GO:0016051: carbohydrate biosynthetic process8.23E-03
89GO:0009637: response to blue light8.23E-03
90GO:0006839: mitochondrial transport9.01E-03
91GO:0009734: auxin-activated signaling pathway9.56E-03
92GO:0042546: cell wall biogenesis1.01E-02
93GO:0009644: response to high light intensity1.04E-02
94GO:0006952: defense response1.08E-02
95GO:0006855: drug transmembrane transport1.09E-02
96GO:0007165: signal transduction1.15E-02
97GO:0009585: red, far-red light phototransduction1.21E-02
98GO:0009909: regulation of flower development1.30E-02
99GO:0045893: positive regulation of transcription, DNA-templated1.39E-02
100GO:0009553: embryo sac development1.52E-02
101GO:0009845: seed germination1.93E-02
102GO:0042744: hydrogen peroxide catabolic process2.00E-02
103GO:0006413: translational initiation2.18E-02
104GO:0040008: regulation of growth2.22E-02
105GO:0010150: leaf senescence2.29E-02
106GO:0042742: defense response to bacterium2.45E-02
107GO:0071555: cell wall organization2.45E-02
108GO:0006970: response to osmotic stress3.30E-02
109GO:0048366: leaf development3.52E-02
RankGO TermAdjusted P value
1GO:0003700: transcription factor activity, sequence-specific DNA binding2.73E-05
2GO:0090440: abscisic acid transporter activity4.18E-05
3GO:0003712: transcription cofactor activity7.51E-05
4GO:0015117: thiosulfate transmembrane transporter activity1.04E-04
5GO:0009973: adenylyl-sulfate reductase activity1.04E-04
6GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.04E-04
7GO:1901677: phosphate transmembrane transporter activity1.04E-04
8GO:0003839: gamma-glutamylcyclotransferase activity1.04E-04
9GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.04E-04
10GO:0043565: sequence-specific DNA binding1.17E-04
11GO:0015141: succinate transmembrane transporter activity1.78E-04
12GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.78E-04
13GO:0005310: dicarboxylic acid transmembrane transporter activity1.78E-04
14GO:0004402: histone acetyltransferase activity1.88E-04
15GO:0015131: oxaloacetate transmembrane transporter activity2.63E-04
16GO:0004372: glycine hydroxymethyltransferase activity4.50E-04
17GO:0010427: abscisic acid binding5.51E-04
18GO:0016161: beta-amylase activity6.58E-04
19GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.07E-04
20GO:0015140: malate transmembrane transporter activity7.69E-04
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.08E-04
22GO:0044212: transcription regulatory region DNA binding8.10E-04
23GO:0031625: ubiquitin protein ligase binding1.12E-03
24GO:0004864: protein phosphatase inhibitor activity1.39E-03
25GO:0015116: sulfate transmembrane transporter activity1.67E-03
26GO:0015297: antiporter activity2.32E-03
27GO:0003714: transcription corepressor activity2.46E-03
28GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.97E-03
29GO:0001085: RNA polymerase II transcription factor binding3.91E-03
30GO:0004872: receptor activity4.31E-03
31GO:0016762: xyloglucan:xyloglucosyl transferase activity4.51E-03
32GO:0003677: DNA binding4.83E-03
33GO:0016798: hydrolase activity, acting on glycosyl bonds6.50E-03
34GO:0015238: drug transmembrane transporter activity7.22E-03
35GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.72E-03
36GO:0051539: 4 iron, 4 sulfur cluster binding9.01E-03
37GO:0015171: amino acid transmembrane transporter activity1.30E-02
38GO:0015035: protein disulfide oxidoreductase activity1.59E-02
39GO:0016758: transferase activity, transferring hexosyl groups1.79E-02
40GO:0005516: calmodulin binding1.82E-02
41GO:0030170: pyridoxal phosphate binding1.96E-02
42GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.00E-02
43GO:0016757: transferase activity, transferring glycosyl groups2.14E-02
44GO:0003743: translation initiation factor activity2.56E-02
45GO:0004601: peroxidase activity3.13E-02
46GO:0003682: chromatin binding3.26E-02
47GO:0046983: protein dimerization activity3.27E-02
48GO:0043531: ADP binding3.34E-02
49GO:0004842: ubiquitin-protein transferase activity3.38E-02
50GO:0020037: heme binding3.86E-02
RankGO TermAdjusted P value
1GO:0019005: SCF ubiquitin ligase complex4.78E-04
2GO:0005615: extracellular space2.71E-03
3GO:0015629: actin cytoskeleton3.15E-03
4GO:0005770: late endosome3.91E-03
5GO:0005667: transcription factor complex6.27E-03
6GO:0031902: late endosome membrane9.28E-03
7GO:0005634: nucleus1.61E-02
8GO:0005794: Golgi apparatus2.10E-02
9GO:0048046: apoplast2.33E-02
10GO:0009536: plastid3.01E-02
11GO:0009505: plant-type cell wall3.07E-02
12GO:0005743: mitochondrial inner membrane4.57E-02
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Gene type



Gene DE type