GO Enrichment Analysis of Co-expressed Genes with
AT5G48830
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0042304: regulation of fatty acid biosynthetic process | 0.00E+00 |
| 6 | GO:0006223: uracil salvage | 0.00E+00 |
| 7 | GO:2000013: regulation of arginine biosynthetic process via ornithine | 0.00E+00 |
| 8 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 9 | GO:0015979: photosynthesis | 9.23E-07 |
| 10 | GO:0000413: protein peptidyl-prolyl isomerization | 1.21E-05 |
| 11 | GO:0006412: translation | 2.76E-05 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 4.64E-05 |
| 13 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 6.91E-05 |
| 14 | GO:1904966: positive regulation of vitamin E biosynthetic process | 6.91E-05 |
| 15 | GO:1904964: positive regulation of phytol biosynthetic process | 6.91E-05 |
| 16 | GO:0019253: reductive pentose-phosphate cycle | 1.36E-04 |
| 17 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.66E-04 |
| 18 | GO:0006457: protein folding | 1.90E-04 |
| 19 | GO:0006096: glycolytic process | 2.19E-04 |
| 20 | GO:0045454: cell redox homeostasis | 2.23E-04 |
| 21 | GO:0032504: multicellular organism reproduction | 2.81E-04 |
| 22 | GO:0019563: glycerol catabolic process | 2.81E-04 |
| 23 | GO:0006696: ergosterol biosynthetic process | 2.81E-04 |
| 24 | GO:0016117: carotenoid biosynthetic process | 3.38E-04 |
| 25 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.06E-04 |
| 26 | GO:0006241: CTP biosynthetic process | 4.06E-04 |
| 27 | GO:0006165: nucleoside diphosphate phosphorylation | 4.06E-04 |
| 28 | GO:0006228: UTP biosynthetic process | 4.06E-04 |
| 29 | GO:2001141: regulation of RNA biosynthetic process | 4.06E-04 |
| 30 | GO:0042742: defense response to bacterium | 4.42E-04 |
| 31 | GO:0009793: embryo development ending in seed dormancy | 4.54E-04 |
| 32 | GO:0015976: carbon utilization | 5.42E-04 |
| 33 | GO:0006183: GTP biosynthetic process | 5.42E-04 |
| 34 | GO:0044206: UMP salvage | 5.42E-04 |
| 35 | GO:2000122: negative regulation of stomatal complex development | 5.42E-04 |
| 36 | GO:0006546: glycine catabolic process | 5.42E-04 |
| 37 | GO:0010037: response to carbon dioxide | 5.42E-04 |
| 38 | GO:0006808: regulation of nitrogen utilization | 5.42E-04 |
| 39 | GO:0009735: response to cytokinin | 6.65E-04 |
| 40 | GO:0043097: pyrimidine nucleoside salvage | 6.87E-04 |
| 41 | GO:0009409: response to cold | 7.56E-04 |
| 42 | GO:0042549: photosystem II stabilization | 8.40E-04 |
| 43 | GO:0006555: methionine metabolic process | 8.40E-04 |
| 44 | GO:0006206: pyrimidine nucleobase metabolic process | 8.40E-04 |
| 45 | GO:0010190: cytochrome b6f complex assembly | 8.40E-04 |
| 46 | GO:0006014: D-ribose metabolic process | 8.40E-04 |
| 47 | GO:0018298: protein-chromophore linkage | 8.92E-04 |
| 48 | GO:0042026: protein refolding | 9.99E-04 |
| 49 | GO:0009854: oxidative photosynthetic carbon pathway | 9.99E-04 |
| 50 | GO:0010555: response to mannitol | 9.99E-04 |
| 51 | GO:0009637: response to blue light | 1.12E-03 |
| 52 | GO:0009642: response to light intensity | 1.34E-03 |
| 53 | GO:0010114: response to red light | 1.42E-03 |
| 54 | GO:0071482: cellular response to light stimulus | 1.53E-03 |
| 55 | GO:0009657: plastid organization | 1.53E-03 |
| 56 | GO:0032544: plastid translation | 1.53E-03 |
| 57 | GO:0035999: tetrahydrofolate interconversion | 1.93E-03 |
| 58 | GO:0009773: photosynthetic electron transport in photosystem I | 2.36E-03 |
| 59 | GO:0043085: positive regulation of catalytic activity | 2.36E-03 |
| 60 | GO:0006352: DNA-templated transcription, initiation | 2.36E-03 |
| 61 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.36E-03 |
| 62 | GO:0006790: sulfur compound metabolic process | 2.58E-03 |
| 63 | GO:0006094: gluconeogenesis | 2.82E-03 |
| 64 | GO:0006807: nitrogen compound metabolic process | 2.82E-03 |
| 65 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.82E-03 |
| 66 | GO:0010020: chloroplast fission | 3.06E-03 |
| 67 | GO:0010207: photosystem II assembly | 3.06E-03 |
| 68 | GO:0046854: phosphatidylinositol phosphorylation | 3.30E-03 |
| 69 | GO:0019344: cysteine biosynthetic process | 3.81E-03 |
| 70 | GO:0009116: nucleoside metabolic process | 3.81E-03 |
| 71 | GO:0006418: tRNA aminoacylation for protein translation | 4.08E-03 |
| 72 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.08E-03 |
| 73 | GO:0006633: fatty acid biosynthetic process | 4.21E-03 |
| 74 | GO:0061077: chaperone-mediated protein folding | 4.35E-03 |
| 75 | GO:0006730: one-carbon metabolic process | 4.63E-03 |
| 76 | GO:0007005: mitochondrion organization | 4.63E-03 |
| 77 | GO:0009411: response to UV | 4.91E-03 |
| 78 | GO:0080022: primary root development | 5.80E-03 |
| 79 | GO:0006662: glycerol ether metabolic process | 6.11E-03 |
| 80 | GO:0019252: starch biosynthetic process | 6.74E-03 |
| 81 | GO:0009658: chloroplast organization | 7.13E-03 |
| 82 | GO:0042254: ribosome biogenesis | 7.27E-03 |
| 83 | GO:0032502: developmental process | 7.40E-03 |
| 84 | GO:0009627: systemic acquired resistance | 9.87E-03 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 1.10E-02 |
| 86 | GO:0048481: plant ovule development | 1.10E-02 |
| 87 | GO:0008219: cell death | 1.10E-02 |
| 88 | GO:0055114: oxidation-reduction process | 1.13E-02 |
| 89 | GO:0010218: response to far red light | 1.18E-02 |
| 90 | GO:0010119: regulation of stomatal movement | 1.22E-02 |
| 91 | GO:0009853: photorespiration | 1.30E-02 |
| 92 | GO:0016051: carbohydrate biosynthetic process | 1.30E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 1.34E-02 |
| 94 | GO:0042542: response to hydrogen peroxide | 1.51E-02 |
| 95 | GO:0009744: response to sucrose | 1.56E-02 |
| 96 | GO:0046686: response to cadmium ion | 1.84E-02 |
| 97 | GO:0009585: red, far-red light phototransduction | 1.92E-02 |
| 98 | GO:0009416: response to light stimulus | 2.33E-02 |
| 99 | GO:0016036: cellular response to phosphate starvation | 3.47E-02 |
| 100 | GO:0009451: RNA modification | 3.71E-02 |
| 101 | GO:0006508: proteolysis | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 3 | GO:0010307: acetylglutamate kinase regulator activity | 0.00E+00 |
| 4 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 5 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 8 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 9 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 10 | GO:0019843: rRNA binding | 1.23E-11 |
| 11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-07 |
| 12 | GO:0003735: structural constituent of ribosome | 6.92E-06 |
| 13 | GO:0051920: peroxiredoxin activity | 1.76E-05 |
| 14 | GO:0016209: antioxidant activity | 3.18E-05 |
| 15 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 6.91E-05 |
| 16 | GO:0004807: triose-phosphate isomerase activity | 6.91E-05 |
| 17 | GO:0051996: squalene synthase activity | 6.91E-05 |
| 18 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 6.91E-05 |
| 19 | GO:0004047: aminomethyltransferase activity | 1.66E-04 |
| 20 | GO:0016630: protochlorophyllide reductase activity | 1.66E-04 |
| 21 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.66E-04 |
| 22 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.66E-04 |
| 23 | GO:0004618: phosphoglycerate kinase activity | 1.66E-04 |
| 24 | GO:0005528: FK506 binding | 1.94E-04 |
| 25 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.81E-04 |
| 26 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.81E-04 |
| 27 | GO:0002161: aminoacyl-tRNA editing activity | 2.81E-04 |
| 28 | GO:0030267: glyoxylate reductase (NADP) activity | 2.81E-04 |
| 29 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.06E-04 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 4.06E-04 |
| 31 | GO:0001053: plastid sigma factor activity | 5.42E-04 |
| 32 | GO:0004845: uracil phosphoribosyltransferase activity | 5.42E-04 |
| 33 | GO:0016836: hydro-lyase activity | 5.42E-04 |
| 34 | GO:0016987: sigma factor activity | 5.42E-04 |
| 35 | GO:0043495: protein anchor | 5.42E-04 |
| 36 | GO:0004659: prenyltransferase activity | 5.42E-04 |
| 37 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.49E-04 |
| 38 | GO:0003959: NADPH dehydrogenase activity | 6.87E-04 |
| 39 | GO:0016168: chlorophyll binding | 7.30E-04 |
| 40 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.99E-04 |
| 41 | GO:0004747: ribokinase activity | 9.99E-04 |
| 42 | GO:0004849: uridine kinase activity | 9.99E-04 |
| 43 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 9.99E-04 |
| 44 | GO:0016831: carboxy-lyase activity | 1.17E-03 |
| 45 | GO:0019899: enzyme binding | 1.17E-03 |
| 46 | GO:0008865: fructokinase activity | 1.34E-03 |
| 47 | GO:0047617: acyl-CoA hydrolase activity | 1.93E-03 |
| 48 | GO:0008047: enzyme activator activity | 2.14E-03 |
| 49 | GO:0044183: protein binding involved in protein folding | 2.36E-03 |
| 50 | GO:0000049: tRNA binding | 2.58E-03 |
| 51 | GO:0051082: unfolded protein binding | 2.69E-03 |
| 52 | GO:0004089: carbonate dehydratase activity | 2.82E-03 |
| 53 | GO:0031072: heat shock protein binding | 2.82E-03 |
| 54 | GO:0008266: poly(U) RNA binding | 3.06E-03 |
| 55 | GO:0031409: pigment binding | 3.56E-03 |
| 56 | GO:0003729: mRNA binding | 4.00E-03 |
| 57 | GO:0004176: ATP-dependent peptidase activity | 4.35E-03 |
| 58 | GO:0022891: substrate-specific transmembrane transporter activity | 4.91E-03 |
| 59 | GO:0004812: aminoacyl-tRNA ligase activity | 5.50E-03 |
| 60 | GO:0047134: protein-disulfide reductase activity | 5.50E-03 |
| 61 | GO:0004791: thioredoxin-disulfide reductase activity | 6.42E-03 |
| 62 | GO:0050662: coenzyme binding | 6.42E-03 |
| 63 | GO:0004601: peroxidase activity | 7.13E-03 |
| 64 | GO:0008483: transaminase activity | 8.42E-03 |
| 65 | GO:0008237: metallopeptidase activity | 8.42E-03 |
| 66 | GO:0008236: serine-type peptidase activity | 1.06E-02 |
| 67 | GO:0004222: metalloendopeptidase activity | 1.18E-02 |
| 68 | GO:0003746: translation elongation factor activity | 1.30E-02 |
| 69 | GO:0009055: electron carrier activity | 1.40E-02 |
| 70 | GO:0003723: RNA binding | 1.59E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.65E-02 |
| 72 | GO:0043621: protein self-association | 1.65E-02 |
| 73 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.92E-02 |
| 74 | GO:0015035: protein disulfide oxidoreductase activity | 2.52E-02 |
| 75 | GO:0042802: identical protein binding | 4.32E-02 |
| 76 | GO:0005509: calcium ion binding | 4.33E-02 |
| 77 | GO:0000287: magnesium ion binding | 4.91E-02 |
| 78 | GO:0005524: ATP binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.19E-52 |
| 2 | GO:0009941: chloroplast envelope | 9.46E-33 |
| 3 | GO:0009570: chloroplast stroma | 2.96E-32 |
| 4 | GO:0009579: thylakoid | 1.91E-21 |
| 5 | GO:0031977: thylakoid lumen | 1.99E-15 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.75E-15 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.93E-15 |
| 8 | GO:0009534: chloroplast thylakoid | 1.49E-10 |
| 9 | GO:0010319: stromule | 8.49E-09 |
| 10 | GO:0005840: ribosome | 8.31E-06 |
| 11 | GO:0048046: apoplast | 5.18E-05 |
| 12 | GO:0009547: plastid ribosome | 6.91E-05 |
| 13 | GO:0000311: plastid large ribosomal subunit | 1.03E-04 |
| 14 | GO:0022626: cytosolic ribosome | 1.03E-04 |
| 15 | GO:0000312: plastid small ribosomal subunit | 1.36E-04 |
| 16 | GO:0031969: chloroplast membrane | 1.64E-04 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 2.16E-04 |
| 18 | GO:0019898: extrinsic component of membrane | 4.53E-04 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.73E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 3.06E-03 |
| 21 | GO:0010287: plastoglobule | 3.18E-03 |
| 22 | GO:0030076: light-harvesting complex | 3.30E-03 |
| 23 | GO:0042651: thylakoid membrane | 4.08E-03 |
| 24 | GO:0022627: cytosolic small ribosomal subunit | 6.11E-03 |
| 25 | GO:0009522: photosystem I | 6.42E-03 |
| 26 | GO:0009523: photosystem II | 6.74E-03 |
| 27 | GO:0009295: nucleoid | 8.42E-03 |
| 28 | GO:0015934: large ribosomal subunit | 1.22E-02 |
| 29 | GO:0009536: plastid | 1.36E-02 |
| 30 | GO:0016020: membrane | 1.73E-02 |
| 31 | GO:0005739: mitochondrion | 2.29E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 2.47E-02 |
| 33 | GO:0005759: mitochondrial matrix | 3.41E-02 |