co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015690: aluminum cation transport	0.00E+00
2	GO:0043201: response to leucine	0.00E+00
3	GO:1900367: positive regulation of defense response to insect	0.00E+00
4	GO:0080052: response to histidine	0.00E+00
5	GO:0080053: response to phenylalanine	0.00E+00
6	GO:0046865: terpenoid transport	0.00E+00
7	GO:1901183: positive regulation of camalexin biosynthetic process	0.00E+00
8	GO:0006182: cGMP biosynthetic process	0.00E+00
9	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
10	GO:0071327: cellular response to trehalose stimulus	0.00E+00
11	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
12	GO:0009617: response to bacterium	6.34E-17
13	GO:0042742: defense response to bacterium	6.26E-14
14	GO:0010120: camalexin biosynthetic process	2.96E-09
15	GO:0006952: defense response	2.68E-08
16	GO:0009751: response to salicylic acid	3.88E-08
17	GO:0000162: tryptophan biosynthetic process	1.55E-07
18	GO:0009627: systemic acquired resistance	4.09E-07
19	GO:0071456: cellular response to hypoxia	4.79E-07
20	GO:0010112: regulation of systemic acquired resistance	5.04E-07
21	GO:0080142: regulation of salicylic acid biosynthetic process	8.06E-07
22	GO:0009682: induced systemic resistance	1.61E-06
23	GO:0009697: salicylic acid biosynthetic process	1.81E-06
24	GO:0051707: response to other organism	3.11E-06
25	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.50E-06
26	GO:0010150: leaf senescence	9.72E-06
27	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.43E-05
28	GO:0006468: protein phosphorylation	2.55E-05
29	GO:0002229: defense response to oomycetes	5.51E-05
30	GO:0052544: defense response by callose deposition in cell wall	6.14E-05
31	GO:0002213: defense response to insect	7.62E-05
32	GO:0050832: defense response to fungus	1.06E-04
33	GO:0070588: calcium ion transmembrane transport	1.33E-04
34	GO:0009620: response to fungus	1.53E-04
35	GO:0009817: defense response to fungus, incompatible interaction	1.77E-04
36	GO:0080147: root hair cell development	1.82E-04
37	GO:0055114: oxidation-reduction process	1.98E-04
38	GO:0009611: response to wounding	2.04E-04
39	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.66E-04
40	GO:0031348: negative regulation of defense response	2.71E-04
41	GO:0009625: response to insect	3.05E-04
42	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.81E-04
43	GO:0009700: indole phytoalexin biosynthetic process	3.81E-04
44	GO:0010230: alternative respiration	3.81E-04
45	GO:0006569: tryptophan catabolic process	3.81E-04
46	GO:0055081: anion homeostasis	3.81E-04
47	GO:0046244: salicylic acid catabolic process	3.81E-04
48	GO:0010266: response to vitamin B1	3.81E-04
49	GO:0051938: L-glutamate import	3.81E-04
50	GO:0030091: protein repair	4.31E-04
51	GO:0009636: response to toxic substance	4.82E-04
52	GO:0006855: drug transmembrane transport	5.10E-04
53	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.27E-04
54	GO:0009851: auxin biosynthetic process	5.60E-04
55	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.45E-04
56	GO:1900426: positive regulation of defense response to bacterium	7.45E-04
57	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	8.27E-04
58	GO:0044419: interspecies interaction between organisms	8.27E-04
59	GO:0031349: positive regulation of defense response	8.27E-04
60	GO:0006423: cysteinyl-tRNA aminoacylation	8.27E-04
61	GO:0030003: cellular cation homeostasis	8.27E-04
62	GO:0042939: tripeptide transport	8.27E-04
63	GO:0043091: L-arginine import	8.27E-04
64	GO:0080183: response to photooxidative stress	8.27E-04
65	GO:0015802: basic amino acid transport	8.27E-04
66	GO:0010618: aerenchyma formation	8.27E-04
67	GO:0043069: negative regulation of programmed cell death	8.68E-04
68	GO:0009816: defense response to bacterium, incompatible interaction	1.04E-03
69	GO:0012501: programmed cell death	1.14E-03
70	GO:0080168: abscisic acid transport	1.34E-03
71	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.34E-03
72	GO:0015692: lead ion transport	1.34E-03
73	GO:0006499: N-terminal protein myristoylation	1.53E-03
74	GO:0009407: toxin catabolic process	1.53E-03
75	GO:0042343: indole glucosinolate metabolic process	1.63E-03
76	GO:0048530: fruit morphogenesis	1.93E-03
77	GO:0019438: aromatic compound biosynthetic process	1.93E-03
78	GO:0002239: response to oomycetes	1.93E-03
79	GO:0006874: cellular calcium ion homeostasis	2.22E-03
80	GO:0003333: amino acid transmembrane transport	2.44E-03
81	GO:0010600: regulation of auxin biosynthetic process	2.60E-03
82	GO:0071219: cellular response to molecule of bacterial origin	2.60E-03
83	GO:0042938: dipeptide transport	2.60E-03
84	GO:1901141: regulation of lignin biosynthetic process	2.60E-03
85	GO:0045088: regulation of innate immune response	2.60E-03
86	GO:0034052: positive regulation of plant-type hypersensitive response	3.32E-03
87	GO:0000304: response to singlet oxygen	3.32E-03
88	GO:0030041: actin filament polymerization	3.32E-03
89	GO:0010225: response to UV-C	3.32E-03
90	GO:0006979: response to oxidative stress	3.56E-03
91	GO:0002238: response to molecule of fungal origin	4.11E-03
92	GO:0009759: indole glucosinolate biosynthetic process	4.11E-03
93	GO:0006561: proline biosynthetic process	4.11E-03
94	GO:0010942: positive regulation of cell death	4.11E-03
95	GO:0010256: endomembrane system organization	4.11E-03
96	GO:0048544: recognition of pollen	4.31E-03
97	GO:0042372: phylloquinone biosynthetic process	4.95E-03
98	GO:0010193: response to ozone	4.95E-03
99	GO:0010199: organ boundary specification between lateral organs and the meristem	4.95E-03
100	GO:0010310: regulation of hydrogen peroxide metabolic process	4.95E-03
101	GO:0009626: plant-type hypersensitive response	4.97E-03
102	GO:0019761: glucosinolate biosynthetic process	5.28E-03
103	GO:0019745: pentacyclic triterpenoid biosynthetic process	5.85E-03
104	GO:0046470: phosphatidylcholine metabolic process	5.85E-03
105	GO:0071446: cellular response to salicylic acid stimulus	5.85E-03
106	GO:1900056: negative regulation of leaf senescence	5.85E-03
107	GO:0010252: auxin homeostasis	6.00E-03
108	GO:0051607: defense response to virus	6.76E-03
109	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.80E-03
110	GO:0043068: positive regulation of programmed cell death	6.80E-03
111	GO:0031540: regulation of anthocyanin biosynthetic process	6.80E-03
112	GO:0010200: response to chitin	7.12E-03
113	GO:0009615: response to virus	7.16E-03
114	GO:0010497: plasmodesmata-mediated intercellular transport	7.80E-03
115	GO:0009808: lignin metabolic process	7.80E-03
116	GO:0009699: phenylpropanoid biosynthetic process	7.80E-03
117	GO:0009821: alkaloid biosynthetic process	8.86E-03
118	GO:0051865: protein autoubiquitination	8.86E-03
119	GO:0008219: cell death	9.36E-03
120	GO:2000280: regulation of root development	9.96E-03
121	GO:0007064: mitotic sister chromatid cohesion	1.11E-02
122	GO:0006032: chitin catabolic process	1.11E-02
123	GO:0009688: abscisic acid biosynthetic process	1.11E-02
124	GO:0032259: methylation	1.14E-02
125	GO:0045087: innate immune response	1.19E-02
126	GO:0009089: lysine biosynthetic process via diaminopimelate	1.23E-02
127	GO:0009684: indoleacetic acid biosynthetic process	1.23E-02
128	GO:0006816: calcium ion transport	1.23E-02
129	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.36E-02
130	GO:0009753: response to jasmonic acid	1.36E-02
131	GO:0006790: sulfur compound metabolic process	1.36E-02
132	GO:0007166: cell surface receptor signaling pathway	1.38E-02
133	GO:0042542: response to hydrogen peroxide	1.48E-02
134	GO:0055046: microgametogenesis	1.48E-02
135	GO:0009718: anthocyanin-containing compound biosynthetic process	1.48E-02
136	GO:0006541: glutamine metabolic process	1.62E-02
137	GO:0002237: response to molecule of bacterial origin	1.62E-02
138	GO:0015031: protein transport	1.66E-02
139	GO:0007165: signal transduction	1.69E-02
140	GO:0046854: phosphatidylinositol phosphorylation	1.75E-02
141	GO:0009969: xyloglucan biosynthetic process	1.75E-02
142	GO:0009846: pollen germination	1.93E-02
143	GO:0042538: hyperosmotic salinity response	1.93E-02
144	GO:0009863: salicylic acid mediated signaling pathway	2.04E-02
145	GO:0005992: trehalose biosynthetic process	2.04E-02
146	GO:0010224: response to UV-B	2.15E-02
147	GO:0016998: cell wall macromolecule catabolic process	2.34E-02
148	GO:0098542: defense response to other organism	2.34E-02
149	GO:0009723: response to ethylene	2.44E-02
150	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.50E-02
151	GO:0019748: secondary metabolic process	2.50E-02
152	GO:0080167: response to karrikin	2.66E-02
153	GO:0045492: xylan biosynthetic process	2.82E-02
154	GO:0009561: megagametogenesis	2.82E-02
155	GO:0010584: pollen exine formation	2.82E-02
156	GO:0044550: secondary metabolite biosynthetic process	2.96E-02
157	GO:0070417: cellular response to cold	2.98E-02
158	GO:0010118: stomatal movement	3.15E-02
159	GO:0042752: regulation of circadian rhythm	3.50E-02
160	GO:0009646: response to absence of light	3.50E-02
161	GO:0006508: proteolysis	3.73E-02
162	GO:0000302: response to reactive oxygen species	3.86E-02
163	GO:0016032: viral process	4.05E-02
164	GO:0009630: gravitropism	4.05E-02
165	GO:0007264: small GTPase mediated signal transduction	4.05E-02
166	GO:0009737: response to abscisic acid	4.32E-02
167	GO:0019760: glucosinolate metabolic process	4.43E-02
168	GO:0000910: cytokinesis	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
5	GO:0016301: kinase activity	8.31E-07
6	GO:0004674: protein serine/threonine kinase activity	1.44E-06
7	GO:0004656: procollagen-proline 4-dioxygenase activity	5.99E-06
8	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.99E-05
9	GO:0004049: anthranilate synthase activity	2.27E-05
10	GO:0009055: electron carrier activity	4.28E-05
11	GO:0005506: iron ion binding	8.78E-05
12	GO:0010279: indole-3-acetic acid amido synthetase activity	8.79E-05
13	GO:0005388: calcium-transporting ATPase activity	9.32E-05
14	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.39E-04
15	GO:0005524: ATP binding	1.47E-04
16	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.65E-04
17	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-04
18	GO:0004048: anthranilate phosphoribosyltransferase activity	3.81E-04
19	GO:0008909: isochorismate synthase activity	3.81E-04
20	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.81E-04
21	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.81E-04
22	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.81E-04
23	GO:0005516: calmodulin binding	5.57E-04
24	GO:0004775: succinate-CoA ligase (ADP-forming) activity	8.27E-04
25	GO:0004142: diacylglycerol cholinephosphotransferase activity	8.27E-04
26	GO:0042937: tripeptide transporter activity	8.27E-04
27	GO:0004776: succinate-CoA ligase (GDP-forming) activity	8.27E-04
28	GO:0004103: choline kinase activity	8.27E-04
29	GO:0004566: beta-glucuronidase activity	8.27E-04
30	GO:0047364: desulfoglucosinolate sulfotransferase activity	8.27E-04
31	GO:0004817: cysteine-tRNA ligase activity	8.27E-04
32	GO:0008171: O-methyltransferase activity	8.68E-04
33	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.27E-03
34	GO:0005262: calcium channel activity	1.29E-03
35	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.34E-03
36	GO:0004383: guanylate cyclase activity	1.34E-03
37	GO:0015238: drug transmembrane transporter activity	1.44E-03
38	GO:0050660: flavin adenine dinucleotide binding	1.45E-03
39	GO:0019825: oxygen binding	1.62E-03
40	GO:0005217: intracellular ligand-gated ion channel activity	1.63E-03
41	GO:0004970: ionotropic glutamate receptor activity	1.63E-03
42	GO:0004867: serine-type endopeptidase inhibitor activity	1.63E-03
43	GO:0015181: arginine transmembrane transporter activity	1.93E-03
44	GO:0035529: NADH pyrophosphatase activity	1.93E-03
45	GO:0042299: lupeol synthase activity	1.93E-03
46	GO:0015189: L-lysine transmembrane transporter activity	1.93E-03
47	GO:0031418: L-ascorbic acid binding	2.02E-03
48	GO:0004364: glutathione transferase activity	2.40E-03
49	GO:0005313: L-glutamate transmembrane transporter activity	2.60E-03
50	GO:0016866: intramolecular transferase activity	2.60E-03
51	GO:0004031: aldehyde oxidase activity	2.60E-03
52	GO:0050302: indole-3-acetaldehyde oxidase activity	2.60E-03
53	GO:0016004: phospholipase activator activity	2.60E-03
54	GO:0004834: tryptophan synthase activity	2.60E-03
55	GO:0042936: dipeptide transporter activity	2.60E-03
56	GO:0047631: ADP-ribose diphosphatase activity	3.32E-03
57	GO:0045431: flavonol synthase activity	3.32E-03
58	GO:0000210: NAD+ diphosphatase activity	4.11E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.11E-03
60	GO:0004866: endopeptidase inhibitor activity	4.11E-03
61	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.95E-03
62	GO:0102391: decanoate--CoA ligase activity	4.95E-03
63	GO:0005261: cation channel activity	4.95E-03
64	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.95E-03
65	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.95E-03
66	GO:0008320: protein transmembrane transporter activity	5.85E-03
67	GO:0004467: long-chain fatty acid-CoA ligase activity	5.85E-03
68	GO:0015035: protein disulfide oxidoreductase activity	6.03E-03
69	GO:0004033: aldo-keto reductase (NADP) activity	6.80E-03
70	GO:0004564: beta-fructofuranosidase activity	6.80E-03
71	GO:0030247: polysaccharide binding	8.44E-03
72	GO:0020037: heme binding	9.37E-03
73	GO:0015174: basic amino acid transmembrane transporter activity	9.96E-03
74	GO:0016844: strictosidine synthase activity	9.96E-03
75	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	9.96E-03
76	GO:0004575: sucrose alpha-glucosidase activity	9.96E-03
77	GO:0030145: manganese ion binding	1.08E-02
78	GO:0015297: antiporter activity	1.10E-02
79	GO:0004568: chitinase activity	1.11E-02
80	GO:0008794: arsenate reductase (glutaredoxin) activity	1.23E-02
81	GO:0008559: xenobiotic-transporting ATPase activity	1.23E-02
82	GO:0004022: alcohol dehydrogenase (NAD) activity	1.48E-02
83	GO:0015095: magnesium ion transmembrane transporter activity	1.48E-02
84	GO:0051537: 2 iron, 2 sulfur cluster binding	1.66E-02
85	GO:0008146: sulfotransferase activity	1.75E-02
86	GO:0004190: aspartic-type endopeptidase activity	1.75E-02
87	GO:0016298: lipase activity	2.15E-02
88	GO:0015171: amino acid transmembrane transporter activity	2.30E-02
89	GO:0045735: nutrient reservoir activity	2.46E-02
90	GO:0005509: calcium ion binding	2.59E-02
91	GO:0008233: peptidase activity	2.61E-02
92	GO:0008080: N-acetyltransferase activity	3.33E-02
93	GO:0046872: metal ion binding	3.63E-02
94	GO:0030246: carbohydrate binding	4.42E-02
95	GO:0008565: protein transporter activity	4.42E-02
96	GO:0008483: transaminase activity	4.62E-02
97	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.74E-02
98	GO:0005507: copper ion binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	4.88E-11
2	GO:0005886: plasma membrane	5.04E-06
3	GO:0005576: extracellular region	1.00E-04
4	GO:0005911: cell-cell junction	3.81E-04
5	GO:0030134: ER to Golgi transport vesicle	8.27E-04
6	GO:0005950: anthranilate synthase complex	8.27E-04
7	GO:0005783: endoplasmic reticulum	9.24E-04
8	GO:0005765: lysosomal membrane	9.99E-04
9	GO:0030660: Golgi-associated vesicle membrane	2.60E-03
10	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.60E-03
11	GO:0048046: apoplast	4.09E-03
12	GO:0005798: Golgi-associated vesicle	4.11E-03
13	GO:0005618: cell wall	5.17E-03
14	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	6.80E-03
15	GO:0005768: endosome	8.50E-03
16	GO:0000325: plant-type vacuole	1.08E-02
17	GO:0046658: anchored component of plasma membrane	1.67E-02
18	GO:0005769: early endosome	1.89E-02
19	GO:0005770: late endosome	3.33E-02
20	GO:0009504: cell plate	3.68E-02
21	GO:0005794: Golgi apparatus	3.89E-02
22	GO:0005829: cytosol	4.12E-02
23	GO:0032580: Golgi cisterna membrane	4.43E-02