Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation7.95E-34
3GO:0042254: ribosome biogenesis1.09E-07
4GO:0002181: cytoplasmic translation1.20E-07
5GO:0000494: box C/D snoRNA 3'-end processing1.97E-05
6GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.97E-05
7GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.97E-05
8GO:1990258: histone glutamine methylation1.97E-05
9GO:0006407: rRNA export from nucleus1.97E-05
10GO:0000027: ribosomal large subunit assembly3.24E-05
11GO:0042256: mature ribosome assembly9.05E-05
12GO:1902626: assembly of large subunit precursor of preribosome9.05E-05
13GO:0070301: cellular response to hydrogen peroxide1.36E-04
14GO:0006241: CTP biosynthetic process1.36E-04
15GO:0006165: nucleoside diphosphate phosphorylation1.36E-04
16GO:0006228: UTP biosynthetic process1.36E-04
17GO:0006183: GTP biosynthetic process1.86E-04
18GO:0071493: cellular response to UV-B2.40E-04
19GO:0031167: rRNA methylation2.40E-04
20GO:0009955: adaxial/abaxial pattern specification3.57E-04
21GO:0009423: chorismate biosynthetic process3.57E-04
22GO:0006364: rRNA processing4.13E-04
23GO:0000028: ribosomal small subunit assembly4.84E-04
24GO:0009735: response to cytokinin5.13E-04
25GO:0001510: RNA methylation5.50E-04
26GO:0001558: regulation of cell growth5.50E-04
27GO:0016573: histone acetylation6.90E-04
28GO:0009073: aromatic amino acid family biosynthetic process8.37E-04
29GO:0048467: gynoecium development1.07E-03
30GO:0051302: regulation of cell division1.41E-03
31GO:0008033: tRNA processing1.98E-03
32GO:0000413: protein peptidyl-prolyl isomerization1.98E-03
33GO:0032502: developmental process2.50E-03
34GO:0009734: auxin-activated signaling pathway3.74E-03
35GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process5.86E-03
36GO:0009651: response to salt stress6.30E-03
37GO:0009620: response to fungus7.56E-03
38GO:0046686: response to cadmium ion1.49E-02
39GO:0006970: response to osmotic stress1.70E-02
40GO:0009793: embryo development ending in seed dormancy2.21E-02
41GO:0006357: regulation of transcription from RNA polymerase II promoter3.02E-02
42GO:0006457: protein folding4.48E-02
43GO:0006511: ubiquitin-dependent protein catabolic process4.63E-02
RankGO TermAdjusted P value
1GO:0016018: cyclosporin A binding0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:0003735: structural constituent of ribosome3.34E-34
4GO:0003729: mRNA binding2.06E-17
5GO:0003723: RNA binding2.07E-06
6GO:1990259: histone-glutamine methyltransferase activity1.97E-05
7GO:0008649: rRNA methyltransferase activity9.05E-05
8GO:0004550: nucleoside diphosphate kinase activity1.36E-04
9GO:0008235: metalloexopeptidase activity4.19E-04
10GO:0030515: snoRNA binding4.19E-04
11GO:0019843: rRNA binding7.20E-04
12GO:0010181: FMN binding2.18E-03
13GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.71E-03
RankGO TermAdjusted P value
1GO:0022625: cytosolic large ribosomal subunit1.86E-32
2GO:0022626: cytosolic ribosome5.68E-27
3GO:0005730: nucleolus1.71E-24
4GO:0005840: ribosome8.63E-15
5GO:0005829: cytosol4.62E-12
6GO:0022627: cytosolic small ribosomal subunit1.35E-11
7GO:0009506: plasmodesma1.91E-11
8GO:0005737: cytoplasm5.07E-10
9GO:0015934: large ribosomal subunit5.47E-08
10GO:0016020: membrane7.34E-07
11GO:0005774: vacuolar membrane1.71E-06
12GO:0005773: vacuole6.92E-06
13GO:0030686: 90S preribosome1.97E-05
14GO:0015935: small ribosomal subunit4.08E-05
15GO:0035267: NuA4 histone acetyltransferase complex5.10E-05
16GO:0031428: box C/D snoRNP complex2.97E-04
17GO:0015030: Cajal body6.90E-04
18GO:0005886: plasma membrane8.15E-04
19GO:0032040: small-subunit processome9.12E-04
20GO:0016592: mediator complex2.50E-03
21GO:0030529: intracellular ribonucleoprotein complex3.07E-03
22GO:0005618: cell wall7.79E-03
23GO:0005622: intracellular8.34E-03
24GO:0009507: chloroplast1.04E-02
25GO:0005777: peroxisome4.11E-02
<
Gene type



Gene DE type