Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
5GO:0010378: temperature compensation of the circadian clock0.00E+00
6GO:0010218: response to far red light2.52E-10
7GO:0009768: photosynthesis, light harvesting in photosystem I9.33E-10
8GO:0009645: response to low light intensity stimulus5.70E-09
9GO:0018298: protein-chromophore linkage2.85E-08
10GO:0009637: response to blue light4.93E-08
11GO:0010114: response to red light8.87E-08
12GO:0009409: response to cold1.05E-06
13GO:0009644: response to high light intensity8.25E-06
14GO:0015812: gamma-aminobutyric acid transport1.77E-05
15GO:0032958: inositol phosphate biosynthetic process1.77E-05
16GO:0048511: rhythmic process3.48E-05
17GO:0010017: red or far-red light signaling pathway3.88E-05
18GO:0051262: protein tetramerization4.61E-05
19GO:0051170: nuclear import4.61E-05
20GO:0007623: circadian rhythm5.07E-05
21GO:0006598: polyamine catabolic process8.18E-05
22GO:0006020: inositol metabolic process1.23E-04
23GO:0010601: positive regulation of auxin biosynthetic process1.23E-04
24GO:0015979: photosynthesis1.60E-04
25GO:0030104: water homeostasis1.69E-04
26GO:0000160: phosphorelay signal transduction system1.69E-04
27GO:0009765: photosynthesis, light harvesting1.69E-04
28GO:2000306: positive regulation of photomorphogenesis1.69E-04
29GO:0010600: regulation of auxin biosynthetic process1.69E-04
30GO:0048578: positive regulation of long-day photoperiodism, flowering2.19E-04
31GO:0042542: response to hydrogen peroxide2.57E-04
32GO:0045962: positive regulation of development, heterochronic2.72E-04
33GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.27E-04
34GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.27E-04
35GO:0009585: red, far-red light phototransduction3.61E-04
36GO:0010161: red light signaling pathway3.84E-04
37GO:0048437: floral organ development3.84E-04
38GO:0009769: photosynthesis, light harvesting in photosystem II3.84E-04
39GO:0009735: response to cytokinin4.31E-04
40GO:0009704: de-etiolation4.43E-04
41GO:0010928: regulation of auxin mediated signaling pathway4.43E-04
42GO:0009827: plant-type cell wall modification5.05E-04
43GO:0090333: regulation of stomatal closure5.68E-04
44GO:0048354: mucilage biosynthetic process involved in seed coat development6.32E-04
45GO:0046856: phosphatidylinositol dephosphorylation7.68E-04
46GO:0009266: response to temperature stimulus9.82E-04
47GO:0003333: amino acid transmembrane transport1.37E-03
48GO:0009269: response to desiccation1.37E-03
49GO:0071215: cellular response to abscisic acid stimulus1.54E-03
50GO:0006355: regulation of transcription, DNA-templated1.58E-03
51GO:0080167: response to karrikin1.60E-03
52GO:0045892: negative regulation of transcription, DNA-templated1.94E-03
53GO:0006814: sodium ion transport2.00E-03
54GO:0042752: regulation of circadian rhythm2.00E-03
55GO:0006351: transcription, DNA-templated2.07E-03
56GO:0009556: microsporogenesis2.09E-03
57GO:0000302: response to reactive oxygen species2.19E-03
58GO:1901657: glycosyl compound metabolic process2.39E-03
59GO:0009817: defense response to fungus, incompatible interaction3.36E-03
60GO:0009631: cold acclimation3.70E-03
61GO:0016051: carbohydrate biosynthetic process3.94E-03
62GO:0009416: response to light stimulus4.11E-03
63GO:0035556: intracellular signal transduction4.34E-03
64GO:0051707: response to other organism4.68E-03
65GO:0009640: photomorphogenesis4.68E-03
66GO:0009965: leaf morphogenesis5.07E-03
67GO:0043086: negative regulation of catalytic activity6.45E-03
68GO:0009553: embryo sac development7.19E-03
69GO:0009624: response to nematode7.34E-03
70GO:0030154: cell differentiation9.04E-03
71GO:0010468: regulation of gene expression1.22E-02
72GO:0005975: carbohydrate metabolic process1.26E-02
73GO:0006970: response to osmotic stress1.54E-02
74GO:0048366: leaf development1.64E-02
75GO:0007165: signal transduction1.74E-02
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.75E-02
77GO:0016042: lipid catabolic process2.20E-02
78GO:0006629: lipid metabolic process2.25E-02
79GO:0009753: response to jasmonic acid2.36E-02
80GO:0009908: flower development3.15E-02
81GO:0009611: response to wounding3.44E-02
82GO:0055085: transmembrane transport4.01E-02
83GO:0006457: protein folding4.07E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding5.68E-10
8GO:0016168: chlorophyll binding1.74E-08
9GO:0015185: gamma-aminobutyric acid transmembrane transporter activity1.77E-05
10GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.77E-05
11GO:0000829: inositol heptakisphosphate kinase activity1.77E-05
12GO:0005227: calcium activated cation channel activity1.77E-05
13GO:0080079: cellobiose glucosidase activity1.77E-05
14GO:0000828: inositol hexakisphosphate kinase activity1.77E-05
15GO:0046872: metal ion binding3.58E-05
16GO:0015180: L-alanine transmembrane transporter activity4.61E-05
17GO:0047216: inositol 3-alpha-galactosyltransferase activity4.61E-05
18GO:0046592: polyamine oxidase activity8.18E-05
19GO:0000156: phosphorelay response regulator activity9.22E-05
20GO:0015189: L-lysine transmembrane transporter activity1.23E-04
21GO:0015181: arginine transmembrane transporter activity1.23E-04
22GO:0005313: L-glutamate transmembrane transporter activity1.69E-04
23GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.19E-04
24GO:0004629: phospholipase C activity2.72E-04
25GO:0004435: phosphatidylinositol phospholipase C activity3.27E-04
26GO:0005261: cation channel activity3.27E-04
27GO:0047372: acylglycerol lipase activity7.68E-04
28GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity8.38E-04
29GO:0005315: inorganic phosphate transmembrane transporter activity9.08E-04
30GO:0004565: beta-galactosidase activity9.08E-04
31GO:0008131: primary amine oxidase activity9.82E-04
32GO:0004707: MAP kinase activity1.37E-03
33GO:0008514: organic anion transmembrane transporter activity1.63E-03
34GO:0102483: scopolin beta-glucosidase activity3.13E-03
35GO:0008422: beta-glucosidase activity4.19E-03
36GO:0015293: symporter activity5.07E-03
37GO:0015171: amino acid transmembrane transporter activity6.17E-03
38GO:0016758: transferase activity, transferring hexosyl groups8.42E-03
39GO:0003677: DNA binding8.93E-03
40GO:0005515: protein binding9.27E-03
41GO:0015144: carbohydrate transmembrane transporter activity9.73E-03
42GO:0046910: pectinesterase inhibitor activity1.02E-02
43GO:0015297: antiporter activity1.04E-02
44GO:0005351: sugar:proton symporter activity1.06E-02
45GO:0004871: signal transducer activity2.00E-02
46GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.13E-02
47GO:0005516: calmodulin binding4.53E-02
RankGO TermAdjusted P value
1GO:0009522: photosystem I4.61E-09
2GO:0010287: plastoglobule7.61E-09
3GO:0030076: light-harvesting complex1.25E-07
4GO:0009523: photosystem II8.71E-07
5GO:0009579: thylakoid2.59E-06
6GO:0009534: chloroplast thylakoid5.51E-05
7GO:0009535: chloroplast thylakoid membrane6.30E-05
8GO:0009517: PSII associated light-harvesting complex II1.69E-04
9GO:0009941: chloroplast envelope2.85E-04
10GO:0031966: mitochondrial membrane5.48E-03
11GO:0005654: nucleoplasm8.42E-03
12GO:0005623: cell8.74E-03
13GO:0009507: chloroplast1.74E-02
14GO:0016021: integral component of membrane1.78E-02
15GO:0016020: membrane2.02E-02
16GO:0005887: integral component of plasma membrane2.80E-02
17GO:0022626: cytosolic ribosome3.28E-02
18GO:0005618: cell wall3.31E-02
19GO:0005777: peroxisome3.74E-02
20GO:0031225: anchored component of membrane4.65E-02
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Gene type



Gene DE type