Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G46630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048312: intracellular distribution of mitochondria0.00E+00
2GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
3GO:0006983: ER overload response0.00E+00
4GO:0002764: immune response-regulating signaling pathway0.00E+00
5GO:0010793: regulation of mRNA export from nucleus0.00E+00
6GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
7GO:0080057: sepal vascular tissue pattern formation0.00E+00
8GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
9GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
10GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
11GO:0019481: L-alanine catabolic process, by transamination0.00E+00
12GO:0000188: inactivation of MAPK activity0.00E+00
13GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
14GO:0006182: cGMP biosynthetic process0.00E+00
15GO:0007160: cell-matrix adhesion0.00E+00
16GO:0006903: vesicle targeting0.00E+00
17GO:0010636: positive regulation of mitochondrial fusion0.00E+00
18GO:0080056: petal vascular tissue pattern formation0.00E+00
19GO:0043069: negative regulation of programmed cell death1.27E-06
20GO:0006468: protein phosphorylation2.55E-06
21GO:0006612: protein targeting to membrane5.29E-05
22GO:0000266: mitochondrial fission8.22E-05
23GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.78E-05
24GO:0006904: vesicle docking involved in exocytosis9.77E-05
25GO:0007166: cell surface receptor signaling pathway1.34E-04
26GO:0000162: tryptophan biosynthetic process1.68E-04
27GO:0006014: D-ribose metabolic process2.07E-04
28GO:0006012: galactose metabolic process3.27E-04
29GO:0006887: exocytosis3.81E-04
30GO:0010941: regulation of cell death3.94E-04
31GO:1901183: positive regulation of camalexin biosynthetic process3.94E-04
32GO:1902065: response to L-glutamate3.94E-04
33GO:0035344: hypoxanthine transport3.94E-04
34GO:0098721: uracil import across plasma membrane3.94E-04
35GO:0042759: long-chain fatty acid biosynthetic process3.94E-04
36GO:0006144: purine nucleobase metabolic process3.94E-04
37GO:0098702: adenine import across plasma membrane3.94E-04
38GO:0046167: glycerol-3-phosphate biosynthetic process3.94E-04
39GO:0098710: guanine import across plasma membrane3.94E-04
40GO:0048363: mucilage pectin metabolic process3.94E-04
41GO:0048482: plant ovule morphogenesis3.94E-04
42GO:0019628: urate catabolic process3.94E-04
43GO:0051245: negative regulation of cellular defense response3.94E-04
44GO:0019567: arabinose biosynthetic process3.94E-04
45GO:0016559: peroxisome fission4.53E-04
46GO:0046777: protein autophosphorylation4.86E-04
47GO:0009617: response to bacterium7.79E-04
48GO:0008202: steroid metabolic process7.83E-04
49GO:0051645: Golgi localization8.55E-04
50GO:0043066: negative regulation of apoptotic process8.55E-04
51GO:0019483: beta-alanine biosynthetic process8.55E-04
52GO:0006212: uracil catabolic process8.55E-04
53GO:0007584: response to nutrient8.55E-04
54GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine8.55E-04
55GO:0060151: peroxisome localization8.55E-04
56GO:0042325: regulation of phosphorylation8.55E-04
57GO:0019441: tryptophan catabolic process to kynurenine8.55E-04
58GO:0051258: protein polymerization8.55E-04
59GO:0080183: response to photooxidative stress8.55E-04
60GO:0050684: regulation of mRNA processing8.55E-04
61GO:0006641: triglyceride metabolic process8.55E-04
62GO:0009727: detection of ethylene stimulus8.55E-04
63GO:0042742: defense response to bacterium1.28E-03
64GO:1900055: regulation of leaf senescence1.39E-03
65GO:0019563: glycerol catabolic process1.39E-03
66GO:0032784: regulation of DNA-templated transcription, elongation1.39E-03
67GO:0016045: detection of bacterium1.39E-03
68GO:0010359: regulation of anion channel activity1.39E-03
69GO:0090436: leaf pavement cell development1.39E-03
70GO:0051646: mitochondrion localization1.39E-03
71GO:0046621: negative regulation of organ growth1.39E-03
72GO:2000034: regulation of seed maturation1.39E-03
73GO:0009225: nucleotide-sugar metabolic process1.71E-03
74GO:0045087: innate immune response1.95E-03
75GO:0006893: Golgi to plasma membrane transport2.00E-03
76GO:0072334: UDP-galactose transmembrane transport2.00E-03
77GO:0006072: glycerol-3-phosphate metabolic process2.00E-03
78GO:0009399: nitrogen fixation2.00E-03
79GO:0080001: mucilage extrusion from seed coat2.00E-03
80GO:0046513: ceramide biosynthetic process2.00E-03
81GO:0010116: positive regulation of abscisic acid biosynthetic process2.00E-03
82GO:2001289: lipid X metabolic process2.00E-03
83GO:0080147: root hair cell development2.12E-03
84GO:0061088: regulation of sequestering of zinc ion2.69E-03
85GO:0033358: UDP-L-arabinose biosynthetic process2.69E-03
86GO:0010363: regulation of plant-type hypersensitive response2.69E-03
87GO:0022622: root system development2.69E-03
88GO:0010188: response to microbial phytotoxin2.69E-03
89GO:0006542: glutamine biosynthetic process2.69E-03
90GO:0010222: stem vascular tissue pattern formation2.69E-03
91GO:0045227: capsule polysaccharide biosynthetic process2.69E-03
92GO:0033320: UDP-D-xylose biosynthetic process2.69E-03
93GO:0010107: potassium ion import2.69E-03
94GO:0006090: pyruvate metabolic process3.44E-03
95GO:0007029: endoplasmic reticulum organization3.44E-03
96GO:0018344: protein geranylgeranylation3.44E-03
97GO:0010225: response to UV-C3.44E-03
98GO:0046686: response to cadmium ion3.71E-03
99GO:0048317: seed morphogenesis4.26E-03
100GO:1900425: negative regulation of defense response to bacterium4.26E-03
101GO:0002238: response to molecule of fungal origin4.26E-03
102GO:0050665: hydrogen peroxide biosynthetic process4.26E-03
103GO:0042732: D-xylose metabolic process4.26E-03
104GO:0061025: membrane fusion4.53E-03
105GO:0019252: starch biosynthetic process4.86E-03
106GO:0009851: auxin biosynthetic process4.86E-03
107GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.13E-03
108GO:0009612: response to mechanical stimulus5.13E-03
109GO:0000911: cytokinesis by cell plate formation5.13E-03
110GO:0009423: chorismate biosynthetic process5.13E-03
111GO:0009620: response to fungus5.52E-03
112GO:0007264: small GTPase mediated signal transduction5.56E-03
113GO:1902074: response to salt6.06E-03
114GO:0010044: response to aluminum ion6.06E-03
115GO:0015031: protein transport6.58E-03
116GO:0009742: brassinosteroid mediated signaling pathway6.67E-03
117GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.05E-03
118GO:0019375: galactolipid biosynthetic process7.05E-03
119GO:0032875: regulation of DNA endoreduplication7.05E-03
120GO:1900150: regulation of defense response to fungus7.05E-03
121GO:0006875: cellular metal ion homeostasis7.05E-03
122GO:0006102: isocitrate metabolic process7.05E-03
123GO:0016192: vesicle-mediated transport7.90E-03
124GO:0009827: plant-type cell wall modification8.09E-03
125GO:0060321: acceptance of pollen8.09E-03
126GO:0006367: transcription initiation from RNA polymerase II promoter8.09E-03
127GO:0010120: camalexin biosynthetic process8.09E-03
128GO:0010204: defense response signaling pathway, resistance gene-independent8.09E-03
129GO:0030968: endoplasmic reticulum unfolded protein response8.09E-03
130GO:0043562: cellular response to nitrogen levels8.09E-03
131GO:0009808: lignin metabolic process8.09E-03
132GO:0006303: double-strand break repair via nonhomologous end joining8.09E-03
133GO:0009051: pentose-phosphate shunt, oxidative branch9.18E-03
134GO:0007338: single fertilization9.18E-03
135GO:0009821: alkaloid biosynthetic process9.18E-03
136GO:0045454: cell redox homeostasis9.61E-03
137GO:0010449: root meristem growth1.03E-02
138GO:0048354: mucilage biosynthetic process involved in seed coat development1.03E-02
139GO:0000723: telomere maintenance1.03E-02
140GO:0016310: phosphorylation1.07E-02
141GO:0006499: N-terminal protein myristoylation1.09E-02
142GO:0009688: abscisic acid biosynthetic process1.15E-02
143GO:0010629: negative regulation of gene expression1.15E-02
144GO:0010150: leaf senescence1.25E-02
145GO:0009073: aromatic amino acid family biosynthetic process1.28E-02
146GO:0009682: induced systemic resistance1.28E-02
147GO:0052544: defense response by callose deposition in cell wall1.28E-02
148GO:0030148: sphingolipid biosynthetic process1.28E-02
149GO:0000038: very long-chain fatty acid metabolic process1.28E-02
150GO:0009751: response to salicylic acid1.29E-02
151GO:0006099: tricarboxylic acid cycle1.31E-02
152GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.41E-02
153GO:0071365: cellular response to auxin stimulus1.41E-02
154GO:0012501: programmed cell death1.41E-02
155GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.44E-02
156GO:0030048: actin filament-based movement1.54E-02
157GO:0010588: cotyledon vascular tissue pattern formation1.54E-02
158GO:0006108: malate metabolic process1.54E-02
159GO:0006807: nitrogen compound metabolic process1.54E-02
160GO:0055046: microgametogenesis1.54E-02
161GO:0051707: response to other organism1.62E-02
162GO:0007034: vacuolar transport1.68E-02
163GO:0002237: response to molecule of bacterial origin1.68E-02
164GO:0048467: gynoecium development1.68E-02
165GO:0000209: protein polyubiquitination1.69E-02
166GO:0080188: RNA-directed DNA methylation1.82E-02
167GO:0010030: positive regulation of seed germination1.82E-02
168GO:0009969: xyloglucan biosynthetic process1.82E-02
169GO:0007031: peroxisome organization1.82E-02
170GO:0034976: response to endoplasmic reticulum stress1.96E-02
171GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.96E-02
172GO:0006812: cation transport2.04E-02
173GO:0009846: pollen germination2.04E-02
174GO:0009863: salicylic acid mediated signaling pathway2.11E-02
175GO:2000377: regulation of reactive oxygen species metabolic process2.11E-02
176GO:0009809: lignin biosynthetic process2.19E-02
177GO:0055114: oxidation-reduction process2.39E-02
178GO:0048278: vesicle docking2.43E-02
179GO:0016998: cell wall macromolecule catabolic process2.43E-02
180GO:0051260: protein homooligomerization2.43E-02
181GO:0035428: hexose transmembrane transport2.59E-02
182GO:0007005: mitochondrion organization2.59E-02
183GO:0071456: cellular response to hypoxia2.59E-02
184GO:0006096: glycolytic process2.59E-02
185GO:0071369: cellular response to ethylene stimulus2.75E-02
186GO:0009306: protein secretion2.92E-02
187GO:0009561: megagametogenesis2.92E-02
188GO:0010584: pollen exine formation2.92E-02
189GO:0042147: retrograde transport, endosome to Golgi3.09E-02
190GO:0006952: defense response3.12E-02
191GO:0009611: response to wounding3.20E-02
192GO:0010118: stomatal movement3.27E-02
193GO:0006885: regulation of pH3.45E-02
194GO:0010305: leaf vascular tissue pattern formation3.45E-02
195GO:0046323: glucose import3.45E-02
196GO:0048544: recognition of pollen3.63E-02
197GO:0006886: intracellular protein transport3.69E-02
198GO:0006891: intra-Golgi vesicle-mediated transport4.01E-02
199GO:0002229: defense response to oomycetes4.01E-02
200GO:0010583: response to cyclopentenone4.20E-02
201GO:0016032: viral process4.20E-02
202GO:0009630: gravitropism4.20E-02
203GO:0032259: methylation4.35E-02
204GO:0010090: trichome morphogenesis4.39E-02
205GO:0010252: auxin homeostasis4.59E-02
206GO:0006914: autophagy4.59E-02
207GO:0006310: DNA recombination4.59E-02
208GO:0009567: double fertilization forming a zygote and endosperm4.59E-02
209GO:0006633: fatty acid biosynthetic process4.87E-02
RankGO TermAdjusted P value
1GO:0070577: lysine-acetylated histone binding0.00E+00
2GO:0004370: glycerol kinase activity0.00E+00
3GO:0005092: GDP-dissociation inhibitor activity0.00E+00
4GO:0004846: urate oxidase activity0.00E+00
5GO:0016504: peptidase activator activity0.00E+00
6GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
7GO:0003837: beta-ureidopropionase activity0.00E+00
8GO:0016301: kinase activity1.06E-09
9GO:0004674: protein serine/threonine kinase activity1.54E-08
10GO:0005524: ATP binding1.41E-07
11GO:0004383: guanylate cyclase activity2.42E-05
12GO:0004834: tryptophan synthase activity9.33E-05
13GO:0017137: Rab GTPase binding1.45E-04
14GO:0004747: ribokinase activity2.80E-04
15GO:0015208: guanine transmembrane transporter activity3.94E-04
16GO:0015294: solute:cation symporter activity3.94E-04
17GO:0015207: adenine transmembrane transporter activity3.94E-04
18GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.94E-04
19GO:0019707: protein-cysteine S-acyltransferase activity3.94E-04
20GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.94E-04
21GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.94E-04
22GO:0004425: indole-3-glycerol-phosphate synthase activity3.94E-04
23GO:0033984: indole-3-glycerol-phosphate lyase activity3.94E-04
24GO:0004034: aldose 1-epimerase activity4.53E-04
25GO:0008865: fructokinase activity4.53E-04
26GO:0008142: oxysterol binding5.53E-04
27GO:0030955: potassium ion binding7.83E-04
28GO:0004743: pyruvate kinase activity7.83E-04
29GO:0045140: inositol phosphoceramide synthase activity8.55E-04
30GO:0032934: sterol binding8.55E-04
31GO:0004061: arylformamidase activity8.55E-04
32GO:0019200: carbohydrate kinase activity8.55E-04
33GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity8.55E-04
34GO:0030742: GTP-dependent protein binding8.55E-04
35GO:0004566: beta-glucuronidase activity8.55E-04
36GO:0050291: sphingosine N-acyltransferase activity8.55E-04
37GO:0004713: protein tyrosine kinase activity9.10E-04
38GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.39E-03
39GO:0016805: dipeptidase activity1.39E-03
40GO:0016595: glutamate binding1.39E-03
41GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity1.39E-03
42GO:0005093: Rab GDP-dissociation inhibitor activity1.39E-03
43GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.74E-03
44GO:0001653: peptide receptor activity2.00E-03
45GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.00E-03
46GO:0004449: isocitrate dehydrogenase (NAD+) activity2.00E-03
47GO:0043130: ubiquitin binding2.12E-03
48GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.43E-03
49GO:0070628: proteasome binding2.69E-03
50GO:0004470: malic enzyme activity2.69E-03
51GO:0015210: uracil transmembrane transporter activity2.69E-03
52GO:0004031: aldehyde oxidase activity2.69E-03
53GO:0050302: indole-3-acetaldehyde oxidase activity2.69E-03
54GO:0019199: transmembrane receptor protein kinase activity2.69E-03
55GO:0010279: indole-3-acetic acid amido synthetase activity2.69E-03
56GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor2.69E-03
57GO:0050373: UDP-arabinose 4-epimerase activity2.69E-03
58GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.69E-03
59GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity2.69E-03
60GO:0005459: UDP-galactose transmembrane transporter activity3.44E-03
61GO:0005452: inorganic anion exchanger activity3.44E-03
62GO:0008948: oxaloacetate decarboxylase activity3.44E-03
63GO:0004040: amidase activity3.44E-03
64GO:0004356: glutamate-ammonia ligase activity3.44E-03
65GO:0045431: flavonol synthase activity3.44E-03
66GO:0015301: anion:anion antiporter activity3.44E-03
67GO:0009055: electron carrier activity4.03E-03
68GO:0015562: efflux transmembrane transporter activity4.26E-03
69GO:0048040: UDP-glucuronate decarboxylase activity4.26E-03
70GO:0004709: MAP kinase kinase kinase activity4.26E-03
71GO:0010181: FMN binding4.53E-03
72GO:0016853: isomerase activity4.53E-03
73GO:0102391: decanoate--CoA ligase activity5.13E-03
74GO:0004656: procollagen-proline 4-dioxygenase activity5.13E-03
75GO:0003978: UDP-glucose 4-epimerase activity5.13E-03
76GO:0019900: kinase binding5.13E-03
77GO:0070403: NAD+ binding5.13E-03
78GO:0030246: carbohydrate binding5.19E-03
79GO:0042162: telomeric DNA binding6.06E-03
80GO:0008143: poly(A) binding6.06E-03
81GO:0004467: long-chain fatty acid-CoA ligase activity6.06E-03
82GO:0008235: metalloexopeptidase activity6.06E-03
83GO:0015035: protein disulfide oxidoreductase activity6.43E-03
84GO:0052747: sinapyl alcohol dehydrogenase activity7.05E-03
85GO:0004033: aldo-keto reductase (NADP) activity7.05E-03
86GO:0004714: transmembrane receptor protein tyrosine kinase activity7.05E-03
87GO:0005267: potassium channel activity8.09E-03
88GO:0030247: polysaccharide binding8.89E-03
89GO:0071949: FAD binding9.18E-03
90GO:0008417: fucosyltransferase activity9.18E-03
91GO:0004003: ATP-dependent DNA helicase activity9.18E-03
92GO:0008757: S-adenosylmethionine-dependent methyltransferase activity9.37E-03
93GO:0005515: protein binding1.01E-02
94GO:0016844: strictosidine synthase activity1.03E-02
95GO:0005096: GTPase activator activity1.04E-02
96GO:0030145: manganese ion binding1.14E-02
97GO:0008171: O-methyltransferase activity1.15E-02
98GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.25E-02
99GO:0004177: aminopeptidase activity1.28E-02
100GO:0045551: cinnamyl-alcohol dehydrogenase activity1.41E-02
101GO:0004521: endoribonuclease activity1.41E-02
102GO:0004022: alcohol dehydrogenase (NAD) activity1.54E-02
103GO:0019888: protein phosphatase regulator activity1.54E-02
104GO:0005484: SNAP receptor activity1.62E-02
105GO:0003774: motor activity1.68E-02
106GO:0051537: 2 iron, 2 sulfur cluster binding1.75E-02
107GO:0016491: oxidoreductase activity1.95E-02
108GO:0004725: protein tyrosine phosphatase activity1.96E-02
109GO:0031418: L-ascorbic acid binding2.11E-02
110GO:0005385: zinc ion transmembrane transporter activity2.11E-02
111GO:0003954: NADH dehydrogenase activity2.11E-02
112GO:0043424: protein histidine kinase binding2.27E-02
113GO:0008324: cation transmembrane transporter activity2.27E-02
114GO:0008234: cysteine-type peptidase activity2.42E-02
115GO:0033612: receptor serine/threonine kinase binding2.43E-02
116GO:0019706: protein-cysteine S-palmitoyltransferase activity2.43E-02
117GO:0050660: flavin adenine dinucleotide binding2.60E-02
118GO:0003756: protein disulfide isomerase activity2.92E-02
119GO:0061630: ubiquitin protein ligase activity3.02E-02
120GO:0005451: monovalent cation:proton antiporter activity3.27E-02
121GO:0030276: clathrin binding3.45E-02
122GO:0008536: Ran GTPase binding3.45E-02
123GO:0005355: glucose transmembrane transporter activity3.63E-02
124GO:0015299: solute:proton antiporter activity3.63E-02
125GO:0015385: sodium:proton antiporter activity4.39E-02
126GO:0003684: damaged DNA binding4.59E-02
127GO:0016791: phosphatase activity4.59E-02
RankGO TermAdjusted P value
1GO:0008305: integrin complex0.00E+00
2GO:0005674: transcription factor TFIIF complex0.00E+00
3GO:0005886: plasma membrane2.61E-13
4GO:0005829: cytosol5.54E-08
5GO:0016021: integral component of membrane9.09E-07
6GO:0005783: endoplasmic reticulum6.32E-05
7GO:0005794: Golgi apparatus1.69E-04
8GO:0005741: mitochondrial outer membrane2.56E-04
9GO:0045252: oxoglutarate dehydrogenase complex3.94E-04
10GO:0000138: Golgi trans cisterna3.94E-04
11GO:0043564: Ku70:Ku80 complex3.94E-04
12GO:0000145: exocyst7.07E-04
13GO:0031304: intrinsic component of mitochondrial inner membrane8.55E-04
14GO:0042406: extrinsic component of endoplasmic reticulum membrane1.39E-03
15GO:0043234: protein complex1.91E-03
16GO:0070062: extracellular exosome2.00E-03
17GO:0005968: Rab-protein geranylgeranyltransferase complex2.00E-03
18GO:0005789: endoplasmic reticulum membrane3.54E-03
19GO:0005777: peroxisome3.80E-03
20GO:0005774: vacuolar membrane4.13E-03
21GO:0000815: ESCRT III complex5.13E-03
22GO:0030173: integral component of Golgi membrane5.13E-03
23GO:0012505: endomembrane system5.97E-03
24GO:0032580: Golgi cisterna membrane6.31E-03
25GO:0005778: peroxisomal membrane6.71E-03
26GO:0000784: nuclear chromosome, telomeric region8.09E-03
27GO:0010494: cytoplasmic stress granule9.18E-03
28GO:0005768: endosome9.39E-03
29GO:0016459: myosin complex1.15E-02
30GO:0005765: lysosomal membrane1.28E-02
31GO:0048471: perinuclear region of cytoplasm1.28E-02
32GO:0031902: late endosome membrane1.49E-02
33GO:0030176: integral component of endoplasmic reticulum membrane1.82E-02
34GO:0005769: early endosome1.96E-02
35GO:0000139: Golgi membrane2.06E-02
36GO:0005802: trans-Golgi network2.18E-02
37GO:0005839: proteasome core complex2.43E-02
38GO:0009504: cell plate3.82E-02
39GO:0009524: phragmoplast4.10E-02
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Gene type



Gene DE type