GO Enrichment Analysis of Co-expressed Genes with
AT5G46390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009249: protein lipoylation | 0.00E+00 |
| 2 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 3 | GO:0006546: glycine catabolic process | 5.27E-07 |
| 4 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.27E-07 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.85E-05 |
| 6 | GO:0016117: carotenoid biosynthetic process | 5.66E-05 |
| 7 | GO:0006696: ergosterol biosynthetic process | 8.61E-05 |
| 8 | GO:0006000: fructose metabolic process | 8.61E-05 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.30E-04 |
| 10 | GO:0016556: mRNA modification | 1.30E-04 |
| 11 | GO:0009765: photosynthesis, light harvesting | 1.78E-04 |
| 12 | GO:0010236: plastoquinone biosynthetic process | 2.30E-04 |
| 13 | GO:0009107: lipoate biosynthetic process | 2.30E-04 |
| 14 | GO:0016123: xanthophyll biosynthetic process | 2.30E-04 |
| 15 | GO:0016120: carotene biosynthetic process | 2.30E-04 |
| 16 | GO:0010190: cytochrome b6f complex assembly | 2.85E-04 |
| 17 | GO:0070814: hydrogen sulfide biosynthetic process | 2.85E-04 |
| 18 | GO:0016554: cytidine to uridine editing | 2.85E-04 |
| 19 | GO:0017148: negative regulation of translation | 3.42E-04 |
| 20 | GO:0016559: peroxisome fission | 4.64E-04 |
| 21 | GO:0006002: fructose 6-phosphate metabolic process | 5.27E-04 |
| 22 | GO:0000902: cell morphogenesis | 5.93E-04 |
| 23 | GO:1900865: chloroplast RNA modification | 6.61E-04 |
| 24 | GO:0000103: sulfate assimilation | 7.30E-04 |
| 25 | GO:0009970: cellular response to sulfate starvation | 7.30E-04 |
| 26 | GO:0009773: photosynthetic electron transport in photosystem I | 8.02E-04 |
| 27 | GO:0006094: gluconeogenesis | 9.49E-04 |
| 28 | GO:0005986: sucrose biosynthetic process | 9.49E-04 |
| 29 | GO:0019253: reductive pentose-phosphate cycle | 1.02E-03 |
| 30 | GO:0007031: peroxisome organization | 1.10E-03 |
| 31 | GO:0080092: regulation of pollen tube growth | 1.52E-03 |
| 32 | GO:0046686: response to cadmium ion | 2.19E-03 |
| 33 | GO:0019252: starch biosynthetic process | 2.19E-03 |
| 34 | GO:0008152: metabolic process | 2.75E-03 |
| 35 | GO:0018298: protein-chromophore linkage | 3.51E-03 |
| 36 | GO:0009817: defense response to fungus, incompatible interaction | 3.51E-03 |
| 37 | GO:0009407: toxin catabolic process | 3.76E-03 |
| 38 | GO:0016051: carbohydrate biosynthetic process | 4.13E-03 |
| 39 | GO:0009853: photorespiration | 4.13E-03 |
| 40 | GO:0009416: response to light stimulus | 4.40E-03 |
| 41 | GO:0009744: response to sucrose | 4.91E-03 |
| 42 | GO:0009636: response to toxic substance | 5.32E-03 |
| 43 | GO:0055114: oxidation-reduction process | 8.76E-03 |
| 44 | GO:0009739: response to gibberellin | 1.22E-02 |
| 45 | GO:0006810: transport | 1.31E-02 |
| 46 | GO:0005975: carbohydrate metabolic process | 1.35E-02 |
| 47 | GO:0009860: pollen tube growth | 1.62E-02 |
| 48 | GO:0009723: response to ethylene | 1.70E-02 |
| 49 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 50 | GO:0009751: response to salicylic acid | 2.34E-02 |
| 51 | GO:0006281: DNA repair | 2.36E-02 |
| 52 | GO:0009753: response to jasmonic acid | 2.48E-02 |
| 53 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.88E-02 |
| 54 | GO:0009735: response to cytokinin | 3.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.68E-07 |
| 7 | GO:0051996: squalene synthase activity | 1.87E-05 |
| 8 | GO:0010313: phytochrome binding | 1.87E-05 |
| 9 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.85E-05 |
| 10 | GO:0017118: lipoyltransferase activity | 4.85E-05 |
| 11 | GO:0016415: octanoyltransferase activity | 4.85E-05 |
| 12 | GO:0004047: aminomethyltransferase activity | 4.85E-05 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.85E-05 |
| 14 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 8.61E-05 |
| 15 | GO:0003913: DNA photolyase activity | 8.61E-05 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.61E-05 |
| 17 | GO:0048027: mRNA 5'-UTR binding | 1.30E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.78E-04 |
| 19 | GO:0080030: methyl indole-3-acetate esterase activity | 2.85E-04 |
| 20 | GO:0042578: phosphoric ester hydrolase activity | 2.85E-04 |
| 21 | GO:0043295: glutathione binding | 4.02E-04 |
| 22 | GO:0009881: photoreceptor activity | 4.02E-04 |
| 23 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 8.02E-04 |
| 24 | GO:0048038: quinone binding | 2.29E-03 |
| 25 | GO:0004518: nuclease activity | 2.40E-03 |
| 26 | GO:0004519: endonuclease activity | 2.72E-03 |
| 27 | GO:0008483: transaminase activity | 2.72E-03 |
| 28 | GO:0016597: amino acid binding | 2.82E-03 |
| 29 | GO:0050897: cobalt ion binding | 3.88E-03 |
| 30 | GO:0004364: glutathione transferase activity | 4.77E-03 |
| 31 | GO:0005198: structural molecule activity | 5.32E-03 |
| 32 | GO:0016758: transferase activity, transferring hexosyl groups | 8.83E-03 |
| 33 | GO:0019843: rRNA binding | 8.99E-03 |
| 34 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.16E-03 |
| 35 | GO:0016491: oxidoreductase activity | 1.17E-02 |
| 36 | GO:0008194: UDP-glycosyltransferase activity | 1.22E-02 |
| 37 | GO:0042802: identical protein binding | 1.34E-02 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 1.56E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 1.70E-02 |
| 40 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.03E-02 |
| 41 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.19E-02 |
| 42 | GO:0030246: carbohydrate binding | 4.39E-02 |
| 43 | GO:0005507: copper ion binding | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.69E-12 |
| 2 | GO:0005960: glycine cleavage complex | 2.68E-07 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.60E-06 |
| 4 | GO:0009570: chloroplast stroma | 1.07E-05 |
| 5 | GO:0031969: chloroplast membrane | 1.47E-04 |
| 6 | GO:0005779: integral component of peroxisomal membrane | 5.27E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 5.76E-04 |
| 8 | GO:0016324: apical plasma membrane | 7.30E-04 |
| 9 | GO:0009941: chloroplast envelope | 1.75E-03 |
| 10 | GO:0005778: peroxisomal membrane | 2.72E-03 |
| 11 | GO:0010319: stromule | 2.72E-03 |
| 12 | GO:0009579: thylakoid | 5.26E-03 |
| 13 | GO:0009534: chloroplast thylakoid | 5.31E-03 |
| 14 | GO:0048046: apoplast | 6.41E-03 |
| 15 | GO:0005747: mitochondrial respiratory chain complex I | 6.91E-03 |
| 16 | GO:0010287: plastoglobule | 8.66E-03 |
| 17 | GO:0005759: mitochondrial matrix | 1.06E-02 |
| 18 | GO:0043231: intracellular membrane-bounded organelle | 2.53E-02 |
| 19 | GO:0005829: cytosol | 2.69E-02 |
| 20 | GO:0022626: cytosolic ribosome | 3.44E-02 |
| 21 | GO:0005777: peroxisome | 3.92E-02 |