co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G45380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002191: cap-dependent translational initiation	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:0007141: male meiosis I	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:0048227: plasma membrane to endosome transport	0.00E+00
8	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
9	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
10	GO:0051553: flavone biosynthetic process	0.00E+00
11	GO:0010398: xylogalacturonan metabolic process	0.00E+00
12	GO:0006468: protein phosphorylation	2.82E-06
13	GO:0006212: uracil catabolic process	3.13E-06
14	GO:0019483: beta-alanine biosynthetic process	3.13E-06
15	GO:0009612: response to mechanical stimulus	1.47E-04
16	GO:0009819: drought recovery	2.45E-04
17	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2.60E-04
18	GO:0035344: hypoxanthine transport	2.60E-04
19	GO:0002143: tRNA wobble position uridine thiolation	2.60E-04
20	GO:0010265: SCF complex assembly	2.60E-04
21	GO:0098721: uracil import across plasma membrane	2.60E-04
22	GO:0098702: adenine import across plasma membrane	2.60E-04
23	GO:0098710: guanine import across plasma membrane	2.60E-04
24	GO:0006422: aspartyl-tRNA aminoacylation	2.60E-04
25	GO:0043562: cellular response to nitrogen levels	3.02E-04
26	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.06E-04
27	GO:0043069: negative regulation of programmed cell death	5.06E-04
28	GO:0030010: establishment of cell polarity	5.74E-04
29	GO:0043066: negative regulation of apoptotic process	5.74E-04
30	GO:0052542: defense response by callose deposition	5.74E-04
31	GO:0051258: protein polymerization	5.74E-04
32	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.74E-04
33	GO:0007154: cell communication	5.74E-04
34	GO:0019441: tryptophan catabolic process to kynurenine	5.74E-04
35	GO:0002221: pattern recognition receptor signaling pathway	5.74E-04
36	GO:0015914: phospholipid transport	5.74E-04
37	GO:0050684: regulation of mRNA processing	5.74E-04
38	GO:0008219: cell death	6.75E-04
39	GO:0046777: protein autophosphorylation	6.86E-04
40	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	9.31E-04
41	GO:0032784: regulation of DNA-templated transcription, elongation	9.31E-04
42	GO:0010359: regulation of anion channel activity	9.31E-04
43	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.31E-04
44	GO:0080055: low-affinity nitrate transport	9.31E-04
45	GO:0042780: tRNA 3'-end processing	9.31E-04
46	GO:0051176: positive regulation of sulfur metabolic process	9.31E-04
47	GO:0006517: protein deglycosylation	9.31E-04
48	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	9.31E-04
49	GO:0042742: defense response to bacterium	1.01E-03
50	GO:0072583: clathrin-dependent endocytosis	1.33E-03
51	GO:0002679: respiratory burst involved in defense response	1.33E-03
52	GO:0001676: long-chain fatty acid metabolic process	1.33E-03
53	GO:0000187: activation of MAPK activity	1.33E-03
54	GO:0048194: Golgi vesicle budding	1.33E-03
55	GO:0002239: response to oomycetes	1.33E-03
56	GO:0010227: floral organ abscission	1.68E-03
57	GO:2000038: regulation of stomatal complex development	1.78E-03
58	GO:0080142: regulation of salicylic acid biosynthetic process	1.78E-03
59	GO:0060548: negative regulation of cell death	1.78E-03
60	GO:0033320: UDP-D-xylose biosynthetic process	1.78E-03
61	GO:1902584: positive regulation of response to water deprivation	1.78E-03
62	GO:0006090: pyruvate metabolic process	2.27E-03
63	GO:0005513: detection of calcium ion	2.27E-03
64	GO:0007029: endoplasmic reticulum organization	2.27E-03
65	GO:0018344: protein geranylgeranylation	2.27E-03
66	GO:0030308: negative regulation of cell growth	2.27E-03
67	GO:0009626: plant-type hypersensitive response	2.43E-03
68	GO:1902456: regulation of stomatal opening	2.80E-03
69	GO:1900425: negative regulation of defense response to bacterium	2.80E-03
70	GO:0010337: regulation of salicylic acid metabolic process	2.80E-03
71	GO:0001731: formation of translation preinitiation complex	2.80E-03
72	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.80E-03
73	GO:0048232: male gamete generation	2.80E-03
74	GO:0042732: D-xylose metabolic process	2.80E-03
75	GO:0002229: defense response to oomycetes	2.83E-03
76	GO:0010200: response to chitin	3.01E-03
77	GO:0000911: cytokinesis by cell plate formation	3.36E-03
78	GO:2000037: regulation of stomatal complex patterning	3.36E-03
79	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.36E-03
80	GO:0050790: regulation of catalytic activity	3.97E-03
81	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.97E-03
82	GO:0006955: immune response	3.97E-03
83	GO:0043090: amino acid import	3.97E-03
84	GO:0006491: N-glycan processing	4.60E-03
85	GO:1900150: regulation of defense response to fungus	4.60E-03
86	GO:0016559: peroxisome fission	4.60E-03
87	GO:0030968: endoplasmic reticulum unfolded protein response	5.27E-03
88	GO:0006002: fructose 6-phosphate metabolic process	5.27E-03
89	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.27E-03
90	GO:0009880: embryonic pattern specification	5.27E-03
91	GO:0046685: response to arsenic-containing substance	5.98E-03
92	GO:0009051: pentose-phosphate shunt, oxidative branch	5.98E-03
93	GO:0009821: alkaloid biosynthetic process	5.98E-03
94	GO:0051865: protein autoubiquitination	5.98E-03
95	GO:0010119: regulation of stomatal movement	6.15E-03
96	GO:0009086: methionine biosynthetic process	6.71E-03
97	GO:0042761: very long-chain fatty acid biosynthetic process	6.71E-03
98	GO:0007166: cell surface receptor signaling pathway	6.74E-03
99	GO:0006952: defense response	6.83E-03
100	GO:0009617: response to bacterium	7.12E-03
101	GO:0051026: chiasma assembly	7.47E-03
102	GO:0010629: negative regulation of gene expression	7.47E-03
103	GO:0030148: sphingolipid biosynthetic process	8.27E-03
104	GO:0000038: very long-chain fatty acid metabolic process	8.27E-03
105	GO:0015706: nitrate transport	9.09E-03
106	GO:0000266: mitochondrial fission	9.09E-03
107	GO:0010102: lateral root morphogenesis	9.94E-03
108	GO:0006807: nitrogen compound metabolic process	9.94E-03
109	GO:0006108: malate metabolic process	9.94E-03
110	GO:0010229: inflorescence development	9.94E-03
111	GO:0006446: regulation of translational initiation	1.08E-02
112	GO:0070588: calcium ion transmembrane transport	1.17E-02
113	GO:0010053: root epidermal cell differentiation	1.17E-02
114	GO:0009225: nucleotide-sugar metabolic process	1.17E-02
115	GO:0009738: abscisic acid-activated signaling pathway	1.18E-02
116	GO:0000027: ribosomal large subunit assembly	1.36E-02
117	GO:2000377: regulation of reactive oxygen species metabolic process	1.36E-02
118	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.36E-02
119	GO:0006874: cellular calcium ion homeostasis	1.46E-02
120	GO:0016575: histone deacetylation	1.46E-02
121	GO:0009620: response to fungus	1.53E-02
122	GO:0051260: protein homooligomerization	1.56E-02
123	GO:0061077: chaperone-mediated protein folding	1.56E-02
124	GO:0016226: iron-sulfur cluster assembly	1.67E-02
125	GO:0007131: reciprocal meiotic recombination	1.67E-02
126	GO:0031348: negative regulation of defense response	1.67E-02
127	GO:0009814: defense response, incompatible interaction	1.67E-02
128	GO:0015031: protein transport	1.71E-02
129	GO:0018105: peptidyl-serine phosphorylation	1.73E-02
130	GO:0071215: cellular response to abscisic acid stimulus	1.77E-02
131	GO:0001944: vasculature development	1.77E-02
132	GO:0006012: galactose metabolic process	1.77E-02
133	GO:0009742: brassinosteroid mediated signaling pathway	1.78E-02
134	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.99E-02
135	GO:0009751: response to salicylic acid	2.10E-02
136	GO:0042391: regulation of membrane potential	2.11E-02
137	GO:0010501: RNA secondary structure unwinding	2.11E-02
138	GO:0000413: protein peptidyl-prolyl isomerization	2.11E-02
139	GO:0010087: phloem or xylem histogenesis	2.11E-02
140	GO:0045489: pectin biosynthetic process	2.22E-02
141	GO:0006662: glycerol ether metabolic process	2.22E-02
142	GO:0010197: polar nucleus fusion	2.22E-02
143	GO:0008360: regulation of cell shape	2.22E-02
144	GO:0048544: recognition of pollen	2.34E-02
145	GO:0061025: membrane fusion	2.34E-02
146	GO:0042752: regulation of circadian rhythm	2.34E-02
147	GO:0006623: protein targeting to vacuole	2.46E-02
148	GO:0000302: response to reactive oxygen species	2.58E-02
149	GO:0010193: response to ozone	2.58E-02
150	GO:0007264: small GTPase mediated signal transduction	2.70E-02
151	GO:0030163: protein catabolic process	2.83E-02
152	GO:0010150: leaf senescence	2.90E-02
153	GO:0045490: pectin catabolic process	2.90E-02
154	GO:0009873: ethylene-activated signaling pathway	2.94E-02
155	GO:0006914: autophagy	2.96E-02
156	GO:0006310: DNA recombination	2.96E-02
157	GO:0006508: proteolysis	2.98E-02
158	GO:0051607: defense response to virus	3.22E-02
159	GO:0009615: response to virus	3.35E-02
160	GO:0055114: oxidation-reduction process	3.45E-02
161	GO:0009816: defense response to bacterium, incompatible interaction	3.49E-02
162	GO:0009607: response to biotic stimulus	3.49E-02
163	GO:0009627: systemic acquired resistance	3.63E-02
164	GO:0042128: nitrate assimilation	3.63E-02
165	GO:0006950: response to stress	3.77E-02
166	GO:0016049: cell growth	3.91E-02
167	GO:0009813: flavonoid biosynthetic process	4.20E-02
168	GO:0006499: N-terminal protein myristoylation	4.34E-02
169	GO:0048527: lateral root development	4.49E-02
170	GO:0006865: amino acid transport	4.64E-02
171	GO:0009867: jasmonic acid mediated signaling pathway	4.79E-02
172	GO:0034599: cellular response to oxidative stress	4.94E-02
173	GO:0006099: tricarboxylic acid cycle	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0098808: mRNA cap binding	0.00E+00
2	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
6	GO:0033759: flavone synthase activity	0.00E+00
7	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
8	GO:0003837: beta-ureidopropionase activity	0.00E+00
9	GO:0070577: lysine-acetylated histone binding	0.00E+00
10	GO:0005524: ATP binding	5.43E-06
11	GO:0016301: kinase activity	6.55E-06
12	GO:0004674: protein serine/threonine kinase activity	1.99E-05
13	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.45E-04
14	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.60E-04
15	GO:0015294: solute:cation symporter activity	2.60E-04
16	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.60E-04
17	GO:0015207: adenine transmembrane transporter activity	2.60E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.60E-04
19	GO:0032050: clathrin heavy chain binding	2.60E-04
20	GO:0015085: calcium ion transmembrane transporter activity	2.60E-04
21	GO:0004815: aspartate-tRNA ligase activity	2.60E-04
22	GO:0015208: guanine transmembrane transporter activity	2.60E-04
23	GO:0004713: protein tyrosine kinase activity	5.06E-04
24	GO:0005516: calmodulin binding	5.25E-04
25	GO:0045140: inositol phosphoceramide synthase activity	5.74E-04
26	GO:0004061: arylformamidase activity	5.74E-04
27	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	5.74E-04
28	GO:0042781: 3'-tRNA processing endoribonuclease activity	9.31E-04
29	GO:0004557: alpha-galactosidase activity	9.31E-04
30	GO:0004663: Rab geranylgeranyltransferase activity	9.31E-04
31	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	9.31E-04
32	GO:0052692: raffinose alpha-galactosidase activity	9.31E-04
33	GO:0080054: low-affinity nitrate transmembrane transporter activity	9.31E-04
34	GO:0005093: Rab GDP-dissociation inhibitor activity	9.31E-04
35	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.31E-04
36	GO:0008430: selenium binding	9.31E-04
37	GO:0004190: aspartic-type endopeptidase activity	9.50E-04
38	GO:0004792: thiosulfate sulfurtransferase activity	1.33E-03
39	GO:0031176: endo-1,4-beta-xylanase activity	1.33E-03
40	GO:0033612: receptor serine/threonine kinase binding	1.41E-03
41	GO:0070628: proteasome binding	1.78E-03
42	GO:0004470: malic enzyme activity	1.78E-03
43	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.78E-03
44	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.78E-03
45	GO:0015210: uracil transmembrane transporter activity	1.78E-03
46	GO:0008948: oxaloacetate decarboxylase activity	2.27E-03
47	GO:0004040: amidase activity	2.27E-03
48	GO:0005496: steroid binding	2.27E-03
49	GO:0046872: metal ion binding	2.27E-03
50	GO:0008641: small protein activating enzyme activity	2.27E-03
51	GO:0035252: UDP-xylosyltransferase activity	2.80E-03
52	GO:0048040: UDP-glucuronate decarboxylase activity	2.80E-03
53	GO:0102391: decanoate--CoA ligase activity	3.36E-03
54	GO:0004012: phospholipid-translocating ATPase activity	3.36E-03
55	GO:0070403: NAD+ binding	3.36E-03
56	GO:0003872: 6-phosphofructokinase activity	3.97E-03
57	GO:0004467: long-chain fatty acid-CoA ligase activity	3.97E-03
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.56E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	4.60E-03
60	GO:0004708: MAP kinase kinase activity	4.60E-03
61	GO:0004034: aldose 1-epimerase activity	4.60E-03
62	GO:0004683: calmodulin-dependent protein kinase activity	4.80E-03
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.20E-03
64	GO:0003843: 1,3-beta-D-glucan synthase activity	5.27E-03
65	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.27E-03
66	GO:0071949: FAD binding	5.98E-03
67	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.98E-03
68	GO:0005515: protein binding	6.17E-03
69	GO:0016844: strictosidine synthase activity	6.71E-03
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.74E-03
71	GO:0004672: protein kinase activity	7.30E-03
72	GO:0008047: enzyme activator activity	7.47E-03
73	GO:0005543: phospholipid binding	8.27E-03
74	GO:0001054: RNA polymerase I activity	8.27E-03
75	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.09E-03
76	GO:0004521: endoribonuclease activity	9.09E-03
77	GO:0015293: symporter activity	9.79E-03
78	GO:0000175: 3'-5'-exoribonuclease activity	9.94E-03
79	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.94E-03
80	GO:0004022: alcohol dehydrogenase (NAD) activity	9.94E-03
81	GO:0005388: calcium-transporting ATPase activity	9.94E-03
82	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.02E-02
83	GO:0004535: poly(A)-specific ribonuclease activity	1.08E-02
84	GO:0003712: transcription cofactor activity	1.17E-02
85	GO:0004970: ionotropic glutamate receptor activity	1.17E-02
86	GO:0005217: intracellular ligand-gated ion channel activity	1.17E-02
87	GO:0030552: cAMP binding	1.17E-02
88	GO:0030553: cGMP binding	1.17E-02
89	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.18E-02
90	GO:0003954: NADH dehydrogenase activity	1.36E-02
91	GO:0004407: histone deacetylase activity	1.36E-02
92	GO:0043130: ubiquitin binding	1.36E-02
93	GO:0005528: FK506 binding	1.36E-02
94	GO:0061630: ubiquitin protein ligase activity	1.39E-02
95	GO:0005216: ion channel activity	1.46E-02
96	GO:0004540: ribonuclease activity	1.56E-02
97	GO:0008408: 3'-5' exonuclease activity	1.56E-02
98	GO:0022857: transmembrane transporter activity	1.58E-02
99	GO:0003727: single-stranded RNA binding	1.88E-02
100	GO:0030246: carbohydrate binding	1.93E-02
101	GO:0047134: protein-disulfide reductase activity	1.99E-02
102	GO:0005249: voltage-gated potassium channel activity	2.11E-02
103	GO:0030551: cyclic nucleotide binding	2.11E-02
104	GO:0004791: thioredoxin-disulfide reductase activity	2.34E-02
105	GO:0016853: isomerase activity	2.34E-02
106	GO:0004872: receptor activity	2.46E-02
107	GO:0004197: cysteine-type endopeptidase activity	2.70E-02
108	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.83E-02
109	GO:0016791: phosphatase activity	2.96E-02
110	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.09E-02
111	GO:0005509: calcium ion binding	3.13E-02
112	GO:0051213: dioxygenase activity	3.35E-02
113	GO:0004721: phosphoprotein phosphatase activity	3.77E-02
114	GO:0004004: ATP-dependent RNA helicase activity	3.77E-02
115	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.77E-02
116	GO:0008236: serine-type peptidase activity	3.91E-02
117	GO:0005096: GTPase activator activity	4.20E-02
118	GO:0030145: manganese ion binding	4.49E-02
119	GO:0003697: single-stranded DNA binding	4.79E-02
120	GO:0043531: ADP binding	4.90E-02
121	GO:0003993: acid phosphatase activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005886: plasma membrane	2.31E-07
3	GO:0005829: cytosol	1.85E-05
4	GO:0016021: integral component of membrane	1.58E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.60E-04
6	GO:0030014: CCR4-NOT complex	2.60E-04
7	GO:0005783: endoplasmic reticulum	3.09E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	5.74E-04
9	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.31E-04
10	GO:0043234: protein complex	1.05E-03
11	GO:0030658: transport vesicle membrane	1.33E-03
12	GO:0031461: cullin-RING ubiquitin ligase complex	1.33E-03
13	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.33E-03
14	GO:0005802: trans-Golgi network	2.16E-03
15	GO:0005945: 6-phosphofructokinase complex	2.27E-03
16	GO:0005789: endoplasmic reticulum membrane	2.55E-03
17	GO:0009504: cell plate	2.64E-03
18	GO:0016020: membrane	2.73E-03
19	GO:0016282: eukaryotic 43S preinitiation complex	2.80E-03
20	GO:0033290: eukaryotic 48S preinitiation complex	3.36E-03
21	GO:0000794: condensed nuclear chromosome	3.97E-03
22	GO:0000148: 1,3-beta-D-glucan synthase complex	5.27E-03
23	GO:0005736: DNA-directed RNA polymerase I complex	5.98E-03
24	GO:0005773: vacuole	6.12E-03
25	GO:0017119: Golgi transport complex	7.47E-03
26	GO:0030125: clathrin vesicle coat	7.47E-03
27	GO:0005768: endosome	9.40E-03
28	GO:0005764: lysosome	1.08E-02
29	GO:0005794: Golgi apparatus	1.43E-02
30	GO:0010008: endosome membrane	1.44E-02
31	GO:0005737: cytoplasm	1.50E-02
32	GO:0005741: mitochondrial outer membrane	1.56E-02
33	GO:0005839: proteasome core complex	1.56E-02
34	GO:0012505: endomembrane system	1.63E-02
35	GO:0000790: nuclear chromatin	1.99E-02
36	GO:0071944: cell periphery	2.83E-02
37	GO:0005778: peroxisomal membrane	3.09E-02
38	GO:0005887: integral component of plasma membrane	3.13E-02
39	GO:0000151: ubiquitin ligase complex	4.05E-02
40	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.90E-02