Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010793: regulation of mRNA export from nucleus0.00E+00
2GO:0048867: stem cell fate determination0.00E+00
3GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
4GO:0007160: cell-matrix adhesion0.00E+00
5GO:0030328: prenylcysteine catabolic process0.00E+00
6GO:0080056: petal vascular tissue pattern formation0.00E+00
7GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
8GO:0080057: sepal vascular tissue pattern formation0.00E+00
9GO:0030327: prenylated protein catabolic process0.00E+00
10GO:0009312: oligosaccharide biosynthetic process0.00E+00
11GO:0032497: detection of lipopolysaccharide0.00E+00
12GO:0031338: regulation of vesicle fusion7.90E-05
13GO:0035266: meristem growth7.90E-05
14GO:0007292: female gamete generation7.90E-05
15GO:0000303: response to superoxide7.90E-05
16GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic7.90E-05
17GO:0010102: lateral root morphogenesis1.45E-04
18GO:0006446: regulation of translational initiation1.65E-04
19GO:0050684: regulation of mRNA processing1.89E-04
20GO:0007584: response to nutrient1.89E-04
21GO:0051788: response to misfolded protein1.89E-04
22GO:0052542: defense response by callose deposition1.89E-04
23GO:0051258: protein polymerization1.89E-04
24GO:0010163: high-affinity potassium ion import1.89E-04
25GO:2000377: regulation of reactive oxygen species metabolic process2.34E-04
26GO:0042780: tRNA 3'-end processing3.17E-04
27GO:0090630: activation of GTPase activity3.17E-04
28GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic3.17E-04
29GO:0060968: regulation of gene silencing3.17E-04
30GO:0032784: regulation of DNA-templated transcription, elongation3.17E-04
31GO:0045338: farnesyl diphosphate metabolic process4.58E-04
32GO:2001289: lipid X metabolic process4.58E-04
33GO:0070301: cellular response to hydrogen peroxide4.58E-04
34GO:0072334: UDP-galactose transmembrane transport4.58E-04
35GO:0019048: modulation by virus of host morphology or physiology4.58E-04
36GO:0006809: nitric oxide biosynthetic process4.58E-04
37GO:0009399: nitrogen fixation4.58E-04
38GO:0006814: sodium ion transport5.04E-04
39GO:0048544: recognition of pollen5.04E-04
40GO:0006542: glutamine biosynthetic process6.09E-04
41GO:0010107: potassium ion import6.09E-04
42GO:0016032: viral process6.14E-04
43GO:0005513: detection of calcium ion7.72E-04
44GO:0009247: glycolipid biosynthetic process7.72E-04
45GO:0006090: pyruvate metabolic process7.72E-04
46GO:0098719: sodium ion import across plasma membrane7.72E-04
47GO:0006014: D-ribose metabolic process9.42E-04
48GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly9.42E-04
49GO:0048827: phyllome development9.42E-04
50GO:0048232: male gamete generation9.42E-04
51GO:0043248: proteasome assembly9.42E-04
52GO:0010337: regulation of salicylic acid metabolic process9.42E-04
53GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.12E-03
54GO:0009423: chorismate biosynthetic process1.12E-03
55GO:0009612: response to mechanical stimulus1.12E-03
56GO:0033962: cytoplasmic mRNA processing body assembly1.12E-03
57GO:0006401: RNA catabolic process1.31E-03
58GO:0006955: immune response1.31E-03
59GO:0045087: innate immune response1.32E-03
60GO:0010078: maintenance of root meristem identity1.51E-03
61GO:0006875: cellular metal ion homeostasis1.51E-03
62GO:0019375: galactolipid biosynthetic process1.51E-03
63GO:0009051: pentose-phosphate shunt, oxidative branch1.95E-03
64GO:0090305: nucleic acid phosphodiester bond hydrolysis1.95E-03
65GO:0051453: regulation of intracellular pH2.18E-03
66GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway2.18E-03
67GO:0009688: abscisic acid biosynthetic process2.41E-03
68GO:0048829: root cap development2.41E-03
69GO:0010629: negative regulation of gene expression2.41E-03
70GO:0010015: root morphogenesis2.66E-03
71GO:0009073: aromatic amino acid family biosynthetic process2.66E-03
72GO:0048367: shoot system development2.76E-03
73GO:0009626: plant-type hypersensitive response2.85E-03
74GO:0012501: programmed cell death2.92E-03
75GO:0045037: protein import into chloroplast stroma2.92E-03
76GO:0010152: pollen maturation2.92E-03
77GO:0006979: response to oxidative stress2.93E-03
78GO:0006108: malate metabolic process3.18E-03
79GO:0006829: zinc II ion transport3.18E-03
80GO:0010588: cotyledon vascular tissue pattern formation3.18E-03
81GO:0009933: meristem structural organization3.45E-03
82GO:0007034: vacuolar transport3.45E-03
83GO:0090351: seedling development3.73E-03
84GO:0010073: meristem maintenance4.61E-03
85GO:0006874: cellular calcium ion homeostasis4.61E-03
86GO:0009790: embryo development4.68E-03
87GO:0051260: protein homooligomerization4.92E-03
88GO:0006413: translational initiation5.15E-03
89GO:0016036: cellular response to phosphate starvation5.15E-03
90GO:0030433: ubiquitin-dependent ERAD pathway5.24E-03
91GO:0051028: mRNA transport6.22E-03
92GO:0010501: RNA secondary structure unwinding6.57E-03
93GO:0010118: stomatal movement6.57E-03
94GO:0010305: leaf vascular tissue pattern formation6.92E-03
95GO:0019252: starch biosynthetic process7.64E-03
96GO:0009851: auxin biosynthetic process7.64E-03
97GO:0006635: fatty acid beta-oxidation8.01E-03
98GO:0010193: response to ozone8.01E-03
99GO:0000302: response to reactive oxygen species8.01E-03
100GO:0007165: signal transduction8.79E-03
101GO:0006914: autophagy9.16E-03
102GO:0006970: response to osmotic stress9.21E-03
103GO:0016579: protein deubiquitination9.96E-03
104GO:0048366: leaf development1.01E-02
105GO:0009816: defense response to bacterium, incompatible interaction1.08E-02
106GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.10E-02
107GO:0016192: vesicle-mediated transport1.12E-02
108GO:0042128: nitrate assimilation1.12E-02
109GO:0048573: photoperiodism, flowering1.16E-02
110GO:0008219: cell death1.25E-02
111GO:0010311: lateral root formation1.29E-02
112GO:0006499: N-terminal protein myristoylation1.34E-02
113GO:0016051: carbohydrate biosynthetic process1.48E-02
114GO:0009867: jasmonic acid mediated signaling pathway1.48E-02
115GO:0006099: tricarboxylic acid cycle1.52E-02
116GO:0030001: metal ion transport1.62E-02
117GO:0048364: root development1.64E-02
118GO:0042542: response to hydrogen peroxide1.72E-02
119GO:0009651: response to salt stress1.80E-02
120GO:0009965: leaf morphogenesis1.92E-02
121GO:0006812: cation transport2.08E-02
122GO:0009846: pollen germination2.08E-02
123GO:0006468: protein phosphorylation2.14E-02
124GO:0006364: rRNA processing2.19E-02
125GO:0006486: protein glycosylation2.19E-02
126GO:0006813: potassium ion transport2.19E-02
127GO:0046686: response to cadmium ion2.31E-02
128GO:0006417: regulation of translation2.35E-02
129GO:0009742: brassinosteroid mediated signaling pathway2.93E-02
130GO:0055085: transmembrane transport3.54E-02
131GO:0006511: ubiquitin-dependent protein catabolic process3.78E-02
132GO:0006633: fatty acid biosynthetic process3.88E-02
133GO:0010150: leaf senescence4.14E-02
134GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.49E-02
135GO:0006470: protein dephosphorylation4.56E-02
136GO:0010468: regulation of gene expression4.70E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0010293: abscisic aldehyde oxidase activity0.00E+00
3GO:0001735: prenylcysteine oxidase activity0.00E+00
4GO:0003950: NAD+ ADP-ribosyltransferase activity2.20E-05
5GO:0046481: digalactosyldiacylglycerol synthase activity7.90E-05
6GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity7.90E-05
7GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters1.89E-04
8GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity1.89E-04
9GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity3.17E-04
10GO:0019829: cation-transporting ATPase activity3.17E-04
11GO:0042781: 3'-tRNA processing endoribonuclease activity3.17E-04
12GO:0035250: UDP-galactosyltransferase activity4.58E-04
13GO:0004108: citrate (Si)-synthase activity4.58E-04
14GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor6.09E-04
15GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity6.09E-04
16GO:0004470: malic enzyme activity6.09E-04
17GO:0004031: aldehyde oxidase activity6.09E-04
18GO:0050302: indole-3-acetaldehyde oxidase activity6.09E-04
19GO:0004356: glutamate-ammonia ligase activity7.72E-04
20GO:0005459: UDP-galactose transmembrane transporter activity7.72E-04
21GO:0008948: oxaloacetate decarboxylase activity7.72E-04
22GO:0017137: Rab GTPase binding7.72E-04
23GO:0036402: proteasome-activating ATPase activity9.42E-04
24GO:0005096: GTPase activator activity1.11E-03
25GO:0004747: ribokinase activity1.12E-03
26GO:0015491: cation:cation antiporter activity1.51E-03
27GO:0016301: kinase activity1.51E-03
28GO:0008865: fructokinase activity1.51E-03
29GO:0005524: ATP binding1.62E-03
30GO:0005267: potassium channel activity1.72E-03
31GO:0008417: fucosyltransferase activity1.95E-03
32GO:0031625: ubiquitin protein ligase binding2.51E-03
33GO:0004177: aminopeptidase activity2.66E-03
34GO:0015386: potassium:proton antiporter activity2.66E-03
35GO:0005388: calcium-transporting ATPase activity3.18E-03
36GO:0017025: TBP-class protein binding3.73E-03
37GO:0043130: ubiquitin binding4.31E-03
38GO:0016887: ATPase activity4.54E-03
39GO:0043424: protein histidine kinase binding4.61E-03
40GO:0036459: thiol-dependent ubiquitinyl hydrolase activity4.92E-03
41GO:0004707: MAP kinase activity4.92E-03
42GO:0016779: nucleotidyltransferase activity5.24E-03
43GO:0003743: translation initiation factor activity6.45E-03
44GO:0046873: metal ion transmembrane transporter activity6.92E-03
45GO:0030246: carbohydrate binding7.86E-03
46GO:0004843: thiol-dependent ubiquitin-specific protease activity8.01E-03
47GO:0004518: nuclease activity8.39E-03
48GO:0015385: sodium:proton antiporter activity8.77E-03
49GO:0005515: protein binding9.38E-03
50GO:0004674: protein serine/threonine kinase activity9.89E-03
51GO:0050660: flavin adenine dinucleotide binding9.89E-03
52GO:0008233: peptidase activity1.04E-02
53GO:0008375: acetylglucosaminyltransferase activity1.12E-02
54GO:0004004: ATP-dependent RNA helicase activity1.16E-02
55GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.38E-02
56GO:0009055: electron carrier activity1.68E-02
57GO:0051537: 2 iron, 2 sulfur cluster binding1.87E-02
58GO:0051287: NAD binding2.02E-02
59GO:0003729: mRNA binding2.18E-02
60GO:0008026: ATP-dependent helicase activity2.93E-02
61GO:0015144: carbohydrate transmembrane transporter activity3.75E-02
62GO:0008565: protein transporter activity3.75E-02
63GO:0015297: antiporter activity4.01E-02
64GO:0005351: sugar:proton symporter activity4.08E-02
65GO:0008194: UDP-glycosyltransferase activity4.49E-02
RankGO TermAdjusted P value
1GO:0008305: integrin complex0.00E+00
2GO:0016363: nuclear matrix2.20E-05
3GO:0005886: plasma membrane7.74E-04
4GO:0031597: cytosolic proteasome complex1.12E-03
5GO:0000815: ESCRT III complex1.12E-03
6GO:0030173: integral component of Golgi membrane1.12E-03
7GO:0031595: nuclear proteasome complex1.31E-03
8GO:0010494: cytoplasmic stress granule1.95E-03
9GO:0008540: proteasome regulatory particle, base subcomplex2.18E-03
10GO:0031307: integral component of mitochondrial outer membrane2.92E-03
11GO:0005764: lysosome3.45E-03
12GO:0005795: Golgi stack3.73E-03
13GO:0030176: integral component of endoplasmic reticulum membrane3.73E-03
14GO:0005623: cell4.12E-03
15GO:0016021: integral component of membrane4.70E-03
16GO:0005789: endoplasmic reticulum membrane5.50E-03
17GO:0032580: Golgi cisterna membrane9.16E-03
18GO:0000932: P-body1.04E-02
19GO:0009707: chloroplast outer membrane1.25E-02
20GO:0005794: Golgi apparatus1.36E-02
21GO:0000786: nucleosome1.43E-02
22GO:0031902: late endosome membrane1.67E-02
23GO:0005783: endoplasmic reticulum1.80E-02
24GO:0005774: vacuolar membrane1.89E-02
25GO:0031966: mitochondrial membrane2.08E-02
26GO:0000502: proteasome complex2.19E-02
27GO:0012505: endomembrane system2.75E-02
28GO:0009706: chloroplast inner membrane2.81E-02
29GO:0005773: vacuole3.54E-02
30GO:0005622: intracellular4.92E-02
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Gene type



Gene DE type