GO Enrichment Analysis of Co-expressed Genes with
AT5G44320
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000731: DNA synthesis involved in DNA repair | 0.00E+00 |
| 2 | GO:0070478: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | 0.00E+00 |
| 3 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 4 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 5 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 6 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 7 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 8 | GO:0010265: SCF complex assembly | 9.50E-05 |
| 9 | GO:0009968: negative regulation of signal transduction | 9.50E-05 |
| 10 | GO:0080120: CAAX-box protein maturation | 9.50E-05 |
| 11 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 9.50E-05 |
| 12 | GO:0071586: CAAX-box protein processing | 9.50E-05 |
| 13 | GO:0043547: positive regulation of GTPase activity | 9.50E-05 |
| 14 | GO:0006422: aspartyl-tRNA aminoacylation | 9.50E-05 |
| 15 | GO:0006996: organelle organization | 2.24E-04 |
| 16 | GO:0010155: regulation of proton transport | 2.24E-04 |
| 17 | GO:0060149: negative regulation of posttranscriptional gene silencing | 2.24E-04 |
| 18 | GO:0030010: establishment of cell polarity | 2.24E-04 |
| 19 | GO:0006364: rRNA processing | 3.09E-04 |
| 20 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 3.73E-04 |
| 21 | GO:0080055: low-affinity nitrate transport | 3.73E-04 |
| 22 | GO:0001676: long-chain fatty acid metabolic process | 5.37E-04 |
| 23 | GO:0072583: clathrin-dependent endocytosis | 5.37E-04 |
| 24 | GO:0009749: response to glucose | 6.82E-04 |
| 25 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 7.14E-04 |
| 26 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 7.14E-04 |
| 27 | GO:0060548: negative regulation of cell death | 7.14E-04 |
| 28 | GO:0046345: abscisic acid catabolic process | 7.14E-04 |
| 29 | GO:0002229: defense response to oomycetes | 7.29E-04 |
| 30 | GO:0045116: protein neddylation | 9.02E-04 |
| 31 | GO:1900425: negative regulation of defense response to bacterium | 1.10E-03 |
| 32 | GO:0016070: RNA metabolic process | 1.10E-03 |
| 33 | GO:0006499: N-terminal protein myristoylation | 1.47E-03 |
| 34 | GO:0006744: ubiquinone biosynthetic process | 1.54E-03 |
| 35 | GO:0006491: N-glycan processing | 1.78E-03 |
| 36 | GO:0009819: drought recovery | 1.78E-03 |
| 37 | GO:0006261: DNA-dependent DNA replication | 2.03E-03 |
| 38 | GO:0017004: cytochrome complex assembly | 2.03E-03 |
| 39 | GO:0010093: specification of floral organ identity | 2.03E-03 |
| 40 | GO:0015996: chlorophyll catabolic process | 2.03E-03 |
| 41 | GO:0009880: embryonic pattern specification | 2.03E-03 |
| 42 | GO:0009821: alkaloid biosynthetic process | 2.29E-03 |
| 43 | GO:0090333: regulation of stomatal closure | 2.29E-03 |
| 44 | GO:0046685: response to arsenic-containing substance | 2.29E-03 |
| 45 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.56E-03 |
| 46 | GO:0045454: cell redox homeostasis | 2.73E-03 |
| 47 | GO:0010629: negative regulation of gene expression | 2.85E-03 |
| 48 | GO:0006995: cellular response to nitrogen starvation | 2.85E-03 |
| 49 | GO:0030148: sphingolipid biosynthetic process | 3.14E-03 |
| 50 | GO:0045037: protein import into chloroplast stroma | 3.44E-03 |
| 51 | GO:0010582: floral meristem determinacy | 3.44E-03 |
| 52 | GO:0015706: nitrate transport | 3.44E-03 |
| 53 | GO:0009620: response to fungus | 3.74E-03 |
| 54 | GO:0006397: mRNA processing | 3.76E-03 |
| 55 | GO:0010588: cotyledon vascular tissue pattern formation | 3.76E-03 |
| 56 | GO:0048364: root development | 3.76E-03 |
| 57 | GO:0006468: protein phosphorylation | 3.85E-03 |
| 58 | GO:0042742: defense response to bacterium | 4.21E-03 |
| 59 | GO:0034976: response to endoplasmic reticulum stress | 4.75E-03 |
| 60 | GO:0000027: ribosomal large subunit assembly | 5.10E-03 |
| 61 | GO:0030150: protein import into mitochondrial matrix | 5.10E-03 |
| 62 | GO:0006874: cellular calcium ion homeostasis | 5.46E-03 |
| 63 | GO:0061077: chaperone-mediated protein folding | 5.83E-03 |
| 64 | GO:0031348: negative regulation of defense response | 6.20E-03 |
| 65 | GO:0080092: regulation of pollen tube growth | 6.20E-03 |
| 66 | GO:0042127: regulation of cell proliferation | 6.98E-03 |
| 67 | GO:0042391: regulation of membrane potential | 7.79E-03 |
| 68 | GO:0010501: RNA secondary structure unwinding | 7.79E-03 |
| 69 | GO:0010087: phloem or xylem histogenesis | 7.79E-03 |
| 70 | GO:0010305: leaf vascular tissue pattern formation | 8.21E-03 |
| 71 | GO:0010182: sugar mediated signaling pathway | 8.21E-03 |
| 72 | GO:0042752: regulation of circadian rhythm | 8.63E-03 |
| 73 | GO:0006623: protein targeting to vacuole | 9.06E-03 |
| 74 | GO:0010183: pollen tube guidance | 9.06E-03 |
| 75 | GO:0010193: response to ozone | 9.51E-03 |
| 76 | GO:0000302: response to reactive oxygen species | 9.51E-03 |
| 77 | GO:0007264: small GTPase mediated signal transduction | 9.96E-03 |
| 78 | GO:0010252: auxin homeostasis | 1.09E-02 |
| 79 | GO:0042254: ribosome biogenesis | 1.11E-02 |
| 80 | GO:0051607: defense response to virus | 1.18E-02 |
| 81 | GO:0009615: response to virus | 1.23E-02 |
| 82 | GO:0016126: sterol biosynthetic process | 1.23E-02 |
| 83 | GO:0048366: leaf development | 1.29E-02 |
| 84 | GO:0042128: nitrate assimilation | 1.33E-02 |
| 85 | GO:0016049: cell growth | 1.43E-02 |
| 86 | GO:0046777: protein autophosphorylation | 1.45E-02 |
| 87 | GO:0008219: cell death | 1.49E-02 |
| 88 | GO:0048527: lateral root development | 1.65E-02 |
| 89 | GO:0009867: jasmonic acid mediated signaling pathway | 1.76E-02 |
| 90 | GO:0006631: fatty acid metabolic process | 1.99E-02 |
| 91 | GO:0009744: response to sucrose | 2.10E-02 |
| 92 | GO:0009753: response to jasmonic acid | 2.15E-02 |
| 93 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.41E-02 |
| 94 | GO:0006260: DNA replication | 2.41E-02 |
| 95 | GO:0009736: cytokinin-activated signaling pathway | 2.60E-02 |
| 96 | GO:0006486: protein glycosylation | 2.60E-02 |
| 97 | GO:0010224: response to UV-B | 2.67E-02 |
| 98 | GO:0006857: oligopeptide transport | 2.73E-02 |
| 99 | GO:0006417: regulation of translation | 2.80E-02 |
| 100 | GO:0009734: auxin-activated signaling pathway | 2.83E-02 |
| 101 | GO:0048367: shoot system development | 3.00E-02 |
| 102 | GO:0046686: response to cadmium ion | 3.14E-02 |
| 103 | GO:0009553: embryo sac development | 3.27E-02 |
| 104 | GO:0009624: response to nematode | 3.34E-02 |
| 105 | GO:0018105: peptidyl-serine phosphorylation | 3.42E-02 |
| 106 | GO:0006396: RNA processing | 3.42E-02 |
| 107 | GO:0009738: abscisic acid-activated signaling pathway | 3.45E-02 |
| 108 | GO:0009742: brassinosteroid mediated signaling pathway | 3.49E-02 |
| 109 | GO:0009058: biosynthetic process | 4.07E-02 |
| 110 | GO:0009790: embryo development | 4.38E-02 |
| 111 | GO:0010150: leaf senescence | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 3 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 4 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 5 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 6 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 7 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 8 | GO:0000166: nucleotide binding | 2.97E-06 |
| 9 | GO:0005524: ATP binding | 4.11E-05 |
| 10 | GO:0032050: clathrin heavy chain binding | 9.50E-05 |
| 11 | GO:0004815: aspartate-tRNA ligase activity | 9.50E-05 |
| 12 | GO:0045140: inositol phosphoceramide synthase activity | 2.24E-04 |
| 13 | GO:0019781: NEDD8 activating enzyme activity | 2.24E-04 |
| 14 | GO:0033612: receptor serine/threonine kinase binding | 3.65E-04 |
| 15 | GO:0004557: alpha-galactosidase activity | 3.73E-04 |
| 16 | GO:0016805: dipeptidase activity | 3.73E-04 |
| 17 | GO:0052692: raffinose alpha-galactosidase activity | 3.73E-04 |
| 18 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.73E-04 |
| 19 | GO:0008026: ATP-dependent helicase activity | 5.26E-04 |
| 20 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 5.37E-04 |
| 21 | GO:0004930: G-protein coupled receptor activity | 7.14E-04 |
| 22 | GO:0070628: proteasome binding | 7.14E-04 |
| 23 | GO:0015204: urea transmembrane transporter activity | 7.14E-04 |
| 24 | GO:0004040: amidase activity | 9.02E-04 |
| 25 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 9.02E-04 |
| 26 | GO:0008641: small protein activating enzyme activity | 9.02E-04 |
| 27 | GO:0031593: polyubiquitin binding | 1.10E-03 |
| 28 | GO:0004721: phosphoprotein phosphatase activity | 1.21E-03 |
| 29 | GO:0004004: ATP-dependent RNA helicase activity | 1.21E-03 |
| 30 | GO:0004559: alpha-mannosidase activity | 1.31E-03 |
| 31 | GO:0102391: decanoate--CoA ligase activity | 1.31E-03 |
| 32 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.54E-03 |
| 33 | GO:0030145: manganese ion binding | 1.54E-03 |
| 34 | GO:0008235: metalloexopeptidase activity | 1.54E-03 |
| 35 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.78E-03 |
| 36 | GO:0003724: RNA helicase activity | 2.03E-03 |
| 37 | GO:0005515: protein binding | 2.33E-03 |
| 38 | GO:0015293: symporter activity | 2.42E-03 |
| 39 | GO:0016844: strictosidine synthase activity | 2.56E-03 |
| 40 | GO:0004713: protein tyrosine kinase activity | 2.85E-03 |
| 41 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.89E-03 |
| 42 | GO:0001054: RNA polymerase I activity | 3.14E-03 |
| 43 | GO:0004177: aminopeptidase activity | 3.14E-03 |
| 44 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.76E-03 |
| 45 | GO:0004175: endopeptidase activity | 4.08E-03 |
| 46 | GO:0005217: intracellular ligand-gated ion channel activity | 4.41E-03 |
| 47 | GO:0004970: ionotropic glutamate receptor activity | 4.41E-03 |
| 48 | GO:0030552: cAMP binding | 4.41E-03 |
| 49 | GO:0030553: cGMP binding | 4.41E-03 |
| 50 | GO:0003887: DNA-directed DNA polymerase activity | 4.75E-03 |
| 51 | GO:0003954: NADH dehydrogenase activity | 5.10E-03 |
| 52 | GO:0005528: FK506 binding | 5.10E-03 |
| 53 | GO:0005216: ion channel activity | 5.46E-03 |
| 54 | GO:0003756: protein disulfide isomerase activity | 6.98E-03 |
| 55 | GO:0003727: single-stranded RNA binding | 6.98E-03 |
| 56 | GO:0047134: protein-disulfide reductase activity | 7.38E-03 |
| 57 | GO:0005249: voltage-gated potassium channel activity | 7.79E-03 |
| 58 | GO:0016301: kinase activity | 7.79E-03 |
| 59 | GO:0030551: cyclic nucleotide binding | 7.79E-03 |
| 60 | GO:0004791: thioredoxin-disulfide reductase activity | 8.63E-03 |
| 61 | GO:0016853: isomerase activity | 8.63E-03 |
| 62 | GO:0016740: transferase activity | 9.49E-03 |
| 63 | GO:0046982: protein heterodimerization activity | 1.07E-02 |
| 64 | GO:0016791: phosphatase activity | 1.09E-02 |
| 65 | GO:0003723: RNA binding | 1.17E-02 |
| 66 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.33E-02 |
| 67 | GO:0004683: calmodulin-dependent protein kinase activity | 1.38E-02 |
| 68 | GO:0005096: GTPase activator activity | 1.54E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 1.59E-02 |
| 70 | GO:0005509: calcium ion binding | 1.63E-02 |
| 71 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.87E-02 |
| 72 | GO:0005198: structural molecule activity | 2.29E-02 |
| 73 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.35E-02 |
| 74 | GO:0031625: ubiquitin protein ligase binding | 2.80E-02 |
| 75 | GO:0004672: protein kinase activity | 2.92E-02 |
| 76 | GO:0003729: mRNA binding | 2.97E-02 |
| 77 | GO:0016887: ATPase activity | 3.11E-02 |
| 78 | GO:0015035: protein disulfide oxidoreductase activity | 3.42E-02 |
| 79 | GO:0004386: helicase activity | 3.56E-02 |
| 80 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.00E-02 |
| 81 | GO:0015144: carbohydrate transmembrane transporter activity | 4.46E-02 |
| 82 | GO:0008565: protein transporter activity | 4.46E-02 |
| 83 | GO:0004674: protein serine/threonine kinase activity | 4.54E-02 |
| 84 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.69E-02 |
| 85 | GO:0005351: sugar:proton symporter activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0055087: Ski complex | 0.00E+00 |
| 2 | GO:0034455: t-UTP complex | 0.00E+00 |
| 3 | GO:0019034: viral replication complex | 0.00E+00 |
| 4 | GO:0043625: delta DNA polymerase complex | 9.50E-05 |
| 5 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.24E-04 |
| 6 | GO:0043234: protein complex | 2.70E-04 |
| 7 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.74E-04 |
| 8 | GO:0005783: endoplasmic reticulum | 2.92E-04 |
| 9 | GO:0031461: cullin-RING ubiquitin ligase complex | 5.37E-04 |
| 10 | GO:0005730: nucleolus | 5.81E-04 |
| 11 | GO:0005746: mitochondrial respiratory chain | 9.02E-04 |
| 12 | GO:0000794: condensed nuclear chromosome | 1.54E-03 |
| 13 | GO:0005773: vacuole | 1.69E-03 |
| 14 | GO:0005736: DNA-directed RNA polymerase I complex | 2.29E-03 |
| 15 | GO:0030125: clathrin vesicle coat | 2.85E-03 |
| 16 | GO:0017119: Golgi transport complex | 2.85E-03 |
| 17 | GO:0010008: endosome membrane | 3.52E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.41E-03 |
| 19 | GO:0005887: integral component of plasma membrane | 5.24E-03 |
| 20 | GO:0005839: proteasome core complex | 5.83E-03 |
| 21 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 6.98E-03 |
| 22 | GO:0016021: integral component of membrane | 8.68E-03 |
| 23 | GO:0005777: peroxisome | 8.78E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 9.06E-03 |
| 25 | GO:0005886: plasma membrane | 9.79E-03 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 27 | GO:0000932: P-body | 1.23E-02 |
| 28 | GO:0005788: endoplasmic reticulum lumen | 1.28E-02 |
| 29 | GO:0005802: trans-Golgi network | 1.34E-02 |
| 30 | GO:0005829: cytosol | 1.41E-02 |
| 31 | GO:0000151: ubiquitin ligase complex | 1.49E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 1.49E-02 |
| 33 | GO:0005768: endosome | 1.58E-02 |
| 34 | GO:0005743: mitochondrial inner membrane | 1.87E-02 |
| 35 | GO:0005819: spindle | 1.87E-02 |
| 36 | GO:0016607: nuclear speck | 3.00E-02 |
| 37 | GO:0005834: heterotrimeric G-protein complex | 3.07E-02 |
| 38 | GO:0005789: endoplasmic reticulum membrane | 3.07E-02 |
| 39 | GO:0009706: chloroplast inner membrane | 3.34E-02 |
| 40 | GO:0005654: nucleoplasm | 3.85E-02 |
| 41 | GO:0005623: cell | 4.00E-02 |
| 42 | GO:0009524: phragmoplast | 4.07E-02 |