Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:1902171: regulation of tocopherol cyclase activity0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0046677: response to antibiotic0.00E+00
5GO:0010100: negative regulation of photomorphogenesis1.92E-08
6GO:0009723: response to ethylene1.84E-07
7GO:0050992: dimethylallyl diphosphate biosynthetic process5.37E-05
8GO:0042754: negative regulation of circadian rhythm5.37E-05
9GO:0006741: NADP biosynthetic process5.37E-05
10GO:0043496: regulation of protein homodimerization activity5.37E-05
11GO:0050793: regulation of developmental process5.37E-05
12GO:0007623: circadian rhythm6.90E-05
13GO:0090153: regulation of sphingolipid biosynthetic process9.50E-05
14GO:0048575: short-day photoperiodism, flowering9.50E-05
15GO:0019674: NAD metabolic process9.50E-05
16GO:0019363: pyridine nucleotide biosynthetic process1.42E-04
17GO:0015995: chlorophyll biosynthetic process1.78E-04
18GO:0010023: proanthocyanidin biosynthetic process1.95E-04
19GO:0009651: response to salt stress2.23E-04
20GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.11E-04
21GO:0009959: negative gravitropism3.11E-04
22GO:0010114: response to red light3.27E-04
23GO:0010161: red light signaling pathway4.37E-04
24GO:0050821: protein stabilization5.05E-04
25GO:0010099: regulation of photomorphogenesis5.74E-04
26GO:0071482: cellular response to light stimulus5.74E-04
27GO:0009657: plastid organization5.74E-04
28GO:0048574: long-day photoperiodism, flowering5.74E-04
29GO:0006783: heme biosynthetic process6.45E-04
30GO:0009641: shade avoidance7.94E-04
31GO:2000028: regulation of photoperiodism, flowering1.03E-03
32GO:0018107: peptidyl-threonine phosphorylation1.03E-03
33GO:0009718: anthocyanin-containing compound biosynthetic process1.03E-03
34GO:0010223: secondary shoot formation1.11E-03
35GO:0009739: response to gibberellin1.15E-03
36GO:0006833: water transport1.29E-03
37GO:0034976: response to endoplasmic reticulum stress1.29E-03
38GO:0010187: negative regulation of seed germination1.38E-03
39GO:0010017: red or far-red light signaling pathway1.66E-03
40GO:0009686: gibberellin biosynthetic process1.76E-03
41GO:0034220: ion transmembrane transport2.07E-03
42GO:0046686: response to cadmium ion2.59E-03
43GO:0006355: regulation of transcription, DNA-templated2.69E-03
44GO:0009751: response to salicylic acid2.81E-03
45GO:0009753: response to jasmonic acid3.05E-03
46GO:0006351: transcription, DNA-templated3.32E-03
47GO:0010029: regulation of seed germination3.33E-03
48GO:0009737: response to abscisic acid3.85E-03
49GO:0010218: response to far red light4.10E-03
50GO:0006865: amino acid transport4.37E-03
51GO:0009637: response to blue light4.51E-03
52GO:0009640: photomorphogenesis5.37E-03
53GO:0009644: response to high light intensity5.66E-03
54GO:0045893: positive regulation of transcription, DNA-templated5.75E-03
55GO:0009585: red, far-red light phototransduction6.59E-03
56GO:0006417: regulation of translation7.07E-03
57GO:0009740: gibberellic acid mediated signaling pathway8.07E-03
58GO:0009624: response to nematode8.42E-03
59GO:0006396: RNA processing8.59E-03
60GO:0018105: peptidyl-serine phosphorylation8.59E-03
61GO:0010468: regulation of gene expression1.40E-02
62GO:0006810: transport1.49E-02
63GO:0009658: chloroplast organization1.68E-02
64GO:0080167: response to karrikin1.96E-02
65GO:0045454: cell redox homeostasis2.23E-02
66GO:0045892: negative regulation of transcription, DNA-templated2.25E-02
67GO:0032259: methylation2.51E-02
68GO:0006629: lipid metabolic process2.59E-02
69GO:0006397: mRNA processing2.67E-02
70GO:0009555: pollen development3.90E-02
71GO:0035556: intracellular signal transduction4.05E-02
72GO:0055085: transmembrane transport4.62E-02
73GO:0006457: protein folding4.68E-02
74GO:0006511: ubiquitin-dependent protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
2GO:0019904: protein domain specific binding1.44E-05
3GO:0010313: phytochrome binding2.08E-05
4GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity2.08E-05
5GO:0008158: hedgehog receptor activity2.08E-05
6GO:0010277: chlorophyllide a oxygenase [overall] activity9.50E-05
7GO:0051538: 3 iron, 4 sulfur cluster binding2.51E-04
8GO:0004462: lactoylglutathione lyase activity3.11E-04
9GO:0003951: NAD+ kinase activity5.74E-04
10GO:0000989: transcription factor activity, transcription factor binding6.45E-04
11GO:0042802: identical protein binding1.30E-03
12GO:0003954: NADH dehydrogenase activity1.38E-03
13GO:0003727: single-stranded RNA binding1.86E-03
14GO:0003756: protein disulfide isomerase activity1.86E-03
15GO:0003700: transcription factor activity, sequence-specific DNA binding3.14E-03
16GO:0015250: water channel activity3.21E-03
17GO:0051537: 2 iron, 2 sulfur cluster binding5.66E-03
18GO:0043621: protein self-association5.66E-03
19GO:0016298: lipase activity6.75E-03
20GO:0015171: amino acid transmembrane transporter activity7.07E-03
21GO:0031625: ubiquitin protein ligase binding7.07E-03
22GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.00E-02
23GO:0016829: lyase activity1.04E-02
24GO:0003677: DNA binding1.35E-02
25GO:0004672: protein kinase activity1.49E-02
26GO:0008168: methyltransferase activity1.64E-02
27GO:0061630: ubiquitin protein ligase activity2.03E-02
28GO:0016787: hydrolase activity2.18E-02
29GO:0005524: ATP binding2.26E-02
30GO:0042803: protein homodimerization activity2.31E-02
31GO:0004871: signal transducer activity2.31E-02
32GO:0016887: ATPase activity3.54E-02
RankGO TermAdjusted P value
1GO:0031304: intrinsic component of mitochondrial inner membrane5.37E-05
2GO:0016605: PML body9.50E-05
3GO:0016604: nuclear body7.18E-04
4GO:0042651: thylakoid membrane1.47E-03
5GO:0016607: nuclear speck7.57E-03
6GO:0005834: heterotrimeric G-protein complex7.73E-03
7GO:0009706: chloroplast inner membrane8.42E-03
8GO:0010287: plastoglobule9.48E-03
9GO:0009941: chloroplast envelope1.05E-02
10GO:0009570: chloroplast stroma1.60E-02
11GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.80E-02
12GO:0031969: chloroplast membrane1.96E-02
13GO:0009507: chloroplast2.97E-02
14GO:0005887: integral component of plasma membrane3.22E-02
15GO:0005777: peroxisome4.30E-02
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Gene type



Gene DE type