Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G41760

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation0.00E+00
2GO:0007638: mechanosensory behavior0.00E+00
3GO:0071555: cell wall organization6.86E-05
4GO:0048640: negative regulation of developmental growth6.91E-05
5GO:0043087: regulation of GTPase activity6.91E-05
6GO:1902458: positive regulation of stomatal opening6.91E-05
7GO:0060627: regulation of vesicle-mediated transport6.91E-05
8GO:0051775: response to redox state6.91E-05
9GO:0009725: response to hormone1.19E-04
10GO:0015786: UDP-glucose transport1.66E-04
11GO:1903426: regulation of reactive oxygen species biosynthetic process1.66E-04
12GO:0009833: plant-type primary cell wall biogenesis1.74E-04
13GO:0015783: GDP-fucose transport2.81E-04
14GO:0090506: axillary shoot meristem initiation2.81E-04
15GO:0007231: osmosensory signaling pathway4.06E-04
16GO:0006107: oxaloacetate metabolic process4.06E-04
17GO:0072334: UDP-galactose transmembrane transport4.06E-04
18GO:0006633: fatty acid biosynthetic process5.06E-04
19GO:0033500: carbohydrate homeostasis5.42E-04
20GO:0006734: NADH metabolic process5.42E-04
21GO:0009765: photosynthesis, light harvesting5.42E-04
22GO:0008295: spermidine biosynthetic process5.42E-04
23GO:0046785: microtubule polymerization6.87E-04
24GO:0045038: protein import into chloroplast thylakoid membrane6.87E-04
25GO:0016123: xanthophyll biosynthetic process6.87E-04
26GO:0016120: carotene biosynthetic process6.87E-04
27GO:0010405: arabinogalactan protein metabolic process8.40E-04
28GO:0009920: cell plate formation involved in plant-type cell wall biogenesis8.40E-04
29GO:0032973: amino acid export8.40E-04
30GO:0018258: protein O-linked glycosylation via hydroxyproline8.40E-04
31GO:0000160: phosphorelay signal transduction system9.34E-04
32GO:0042372: phylloquinone biosynthetic process9.99E-04
33GO:0010067: procambium histogenesis9.99E-04
34GO:0009395: phospholipid catabolic process1.17E-03
35GO:0043090: amino acid import1.17E-03
36GO:2000070: regulation of response to water deprivation1.34E-03
37GO:0016559: peroxisome fission1.34E-03
38GO:0009744: response to sucrose1.42E-03
39GO:0015996: chlorophyll catabolic process1.53E-03
40GO:0007186: G-protein coupled receptor signaling pathway1.53E-03
41GO:0080144: amino acid homeostasis1.73E-03
42GO:0042538: hyperosmotic salinity response1.78E-03
43GO:0009736: cytokinin-activated signaling pathway1.90E-03
44GO:0042761: very long-chain fatty acid biosynthetic process1.93E-03
45GO:0010205: photoinhibition1.93E-03
46GO:0006816: calcium ion transport2.36E-03
47GO:0045037: protein import into chloroplast stroma2.58E-03
48GO:0006108: malate metabolic process2.82E-03
49GO:0010207: photosystem II assembly3.06E-03
50GO:0010223: secondary shoot formation3.06E-03
51GO:0010143: cutin biosynthetic process3.06E-03
52GO:0010020: chloroplast fission3.06E-03
53GO:0070588: calcium ion transmembrane transport3.30E-03
54GO:0009825: multidimensional cell growth3.30E-03
55GO:0010025: wax biosynthetic process3.56E-03
56GO:0006636: unsaturated fatty acid biosynthetic process3.56E-03
57GO:0051302: regulation of cell division4.08E-03
58GO:0031408: oxylipin biosynthetic process4.35E-03
59GO:0016998: cell wall macromolecule catabolic process4.35E-03
60GO:0030245: cellulose catabolic process4.63E-03
61GO:0009294: DNA mediated transformation4.91E-03
62GO:0001944: vasculature development4.91E-03
63GO:0010089: xylem development5.20E-03
64GO:0019722: calcium-mediated signaling5.20E-03
65GO:0016117: carotenoid biosynthetic process5.50E-03
66GO:0010087: phloem or xylem histogenesis5.80E-03
67GO:0010182: sugar mediated signaling pathway6.11E-03
68GO:0048510: regulation of timing of transition from vegetative to reproductive phase7.07E-03
69GO:0042254: ribosome biogenesis7.27E-03
70GO:0007264: small GTPase mediated signal transduction7.40E-03
71GO:0010090: trichome morphogenesis7.73E-03
72GO:0007267: cell-cell signaling8.42E-03
73GO:0010027: thylakoid membrane organization9.13E-03
74GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.50E-03
75GO:0042128: nitrate assimilation9.87E-03
76GO:0010411: xyloglucan metabolic process1.02E-02
77GO:0030244: cellulose biosynthetic process1.10E-02
78GO:0009832: plant-type cell wall biogenesis1.14E-02
79GO:0010311: lateral root formation1.14E-02
80GO:0006099: tricarboxylic acid cycle1.34E-02
81GO:0006631: fatty acid metabolic process1.47E-02
82GO:0042546: cell wall biogenesis1.60E-02
83GO:0008643: carbohydrate transport1.65E-02
84GO:0006855: drug transmembrane transport1.74E-02
85GO:0005975: carbohydrate metabolic process1.78E-02
86GO:0006813: potassium ion transport1.92E-02
87GO:0006857: oligopeptide transport2.02E-02
88GO:0009624: response to nematode2.47E-02
89GO:0051301: cell division2.54E-02
90GO:0007165: signal transduction2.65E-02
91GO:0007623: circadian rhythm3.65E-02
92GO:0009617: response to bacterium4.14E-02
RankGO TermAdjusted P value
1GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
2GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity0.00E+00
3GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
4GO:1990534: thermospermine oxidase activity0.00E+00
5GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
6GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity0.00E+00
7GO:0045435: lycopene epsilon cyclase activity0.00E+00
8GO:0031957: very long-chain fatty acid-CoA ligase activity6.91E-05
9GO:0008746: NAD(P)+ transhydrogenase activity6.91E-05
10GO:0047259: glucomannan 4-beta-mannosyltransferase activity6.91E-05
11GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity6.91E-05
12GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity6.91E-05
13GO:0004766: spermidine synthase activity1.66E-04
14GO:0008805: carbon-monoxide oxygenase activity1.66E-04
15GO:0005457: GDP-fucose transmembrane transporter activity2.81E-04
16GO:0005460: UDP-glucose transmembrane transporter activity4.06E-04
17GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity4.06E-04
18GO:0004872: receptor activity4.53E-04
19GO:0080032: methyl jasmonate esterase activity5.42E-04
20GO:0052793: pectin acetylesterase activity5.42E-04
21GO:0000156: phosphorelay response regulator activity5.49E-04
22GO:0005459: UDP-galactose transmembrane transporter activity6.87E-04
23GO:0004040: amidase activity6.87E-04
24GO:0016208: AMP binding8.40E-04
25GO:0016615: malate dehydrogenase activity8.40E-04
26GO:0080030: methyl indole-3-acetate esterase activity8.40E-04
27GO:1990714: hydroxyproline O-galactosyltransferase activity8.40E-04
28GO:0051753: mannan synthase activity9.99E-04
29GO:0102391: decanoate--CoA ligase activity9.99E-04
30GO:0030060: L-malate dehydrogenase activity9.99E-04
31GO:0004467: long-chain fatty acid-CoA ligase activity1.17E-03
32GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.53E-03
33GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.73E-03
34GO:0003924: GTPase activity2.07E-03
35GO:0005262: calcium channel activity2.82E-03
36GO:0004565: beta-galactosidase activity2.82E-03
37GO:0008131: primary amine oxidase activity3.06E-03
38GO:0016491: oxidoreductase activity3.33E-03
39GO:0019843: rRNA binding3.36E-03
40GO:0004725: protein tyrosine phosphatase activity3.56E-03
41GO:0008324: cation transmembrane transporter activity4.08E-03
42GO:0033612: receptor serine/threonine kinase binding4.35E-03
43GO:0015297: antiporter activity4.41E-03
44GO:0008017: microtubule binding4.83E-03
45GO:0008810: cellulase activity4.91E-03
46GO:0016760: cellulose synthase (UDP-forming) activity4.91E-03
47GO:0008514: organic anion transmembrane transporter activity5.20E-03
48GO:0005102: receptor binding5.50E-03
49GO:0042802: identical protein binding5.86E-03
50GO:0016762: xyloglucan:xyloglucosyl transferase activity7.07E-03
51GO:0016788: hydrolase activity, acting on ester bonds7.27E-03
52GO:0005525: GTP binding8.05E-03
53GO:0016759: cellulose synthase activity8.08E-03
54GO:0052689: carboxylic ester hydrolase activity9.78E-03
55GO:0016798: hydrolase activity, acting on glycosyl bonds1.02E-02
56GO:0004871: signal transducer activity1.11E-02
57GO:0005096: GTPase activator activity1.14E-02
58GO:0015238: drug transmembrane transporter activity1.14E-02
59GO:0005215: transporter activity1.19E-02
60GO:0003993: acid phosphatase activity1.34E-02
61GO:0016757: transferase activity, transferring glycosyl groups1.40E-02
62GO:0035091: phosphatidylinositol binding1.65E-02
63GO:0015293: symporter activity1.69E-02
64GO:0015171: amino acid transmembrane transporter activity2.07E-02
65GO:0004650: polygalacturonase activity2.32E-02
66GO:0022857: transmembrane transporter activity2.37E-02
67GO:0016758: transferase activity, transferring hexosyl groups2.84E-02
68GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.96E-02
69GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.07E-02
70GO:0030246: carbohydrate binding3.13E-02
71GO:0005515: protein binding4.83E-02
RankGO TermAdjusted P value
1GO:0009923: fatty acid elongase complex6.91E-05
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex6.91E-05
3GO:0009941: chloroplast envelope1.12E-04
4GO:0009507: chloroplast1.42E-04
5GO:0048046: apoplast2.74E-04
6GO:0009528: plastid inner membrane2.81E-04
7GO:0009527: plastid outer membrane5.42E-04
8GO:0009707: chloroplast outer membrane8.92E-04
9GO:0031969: chloroplast membrane1.27E-03
10GO:0055028: cortical microtubule2.14E-03
11GO:0009574: preprophase band2.82E-03
12GO:0009570: chloroplast stroma3.56E-03
13GO:0016021: integral component of membrane3.69E-03
14GO:0009532: plastid stroma4.35E-03
15GO:0009579: thylakoid5.37E-03
16GO:0005886: plasma membrane6.15E-03
17GO:0005778: peroxisomal membrane8.42E-03
18GO:0010319: stromule8.42E-03
19GO:0015934: large ribosomal subunit1.22E-02
20GO:0000139: Golgi membrane1.54E-02
21GO:0005856: cytoskeleton1.69E-02
22GO:0005618: cell wall1.76E-02
23GO:0005834: heterotrimeric G-protein complex2.27E-02
24GO:0005777: peroxisome2.67E-02
25GO:0009535: chloroplast thylakoid membrane2.90E-02
26GO:0005802: trans-Golgi network3.72E-02
27GO:0005615: extracellular space3.95E-02
28GO:0005768: endosome4.23E-02
29GO:0005840: ribosome4.91E-02
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Gene type



Gene DE type