GO Enrichment Analysis of Co-expressed Genes with
AT5G41050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0015822: ornithine transport | 0.00E+00 |
| 6 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 7 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 8 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.65E-08 |
| 10 | GO:0006546: glycine catabolic process | 7.80E-08 |
| 11 | GO:0006810: transport | 2.32E-06 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 7.66E-06 |
| 13 | GO:0009902: chloroplast relocation | 1.93E-05 |
| 14 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.93E-05 |
| 15 | GO:0016120: carotene biosynthetic process | 3.14E-05 |
| 16 | GO:0016123: xanthophyll biosynthetic process | 3.14E-05 |
| 17 | GO:0016117: carotenoid biosynthetic process | 6.22E-05 |
| 18 | GO:0055114: oxidation-reduction process | 9.36E-05 |
| 19 | GO:0051180: vitamin transport | 1.56E-04 |
| 20 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.56E-04 |
| 21 | GO:0030974: thiamine pyrophosphate transport | 1.56E-04 |
| 22 | GO:0071370: cellular response to gibberellin stimulus | 1.56E-04 |
| 23 | GO:0006723: cuticle hydrocarbon biosynthetic process | 1.56E-04 |
| 24 | GO:0080093: regulation of photorespiration | 1.56E-04 |
| 25 | GO:0000066: mitochondrial ornithine transport | 1.56E-04 |
| 26 | GO:0031998: regulation of fatty acid beta-oxidation | 1.56E-04 |
| 27 | GO:0010362: negative regulation of anion channel activity by blue light | 1.56E-04 |
| 28 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.86E-04 |
| 29 | GO:0015893: drug transport | 3.55E-04 |
| 30 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.55E-04 |
| 31 | GO:0006094: gluconeogenesis | 3.74E-04 |
| 32 | GO:0019253: reductive pentose-phosphate cycle | 4.23E-04 |
| 33 | GO:0005977: glycogen metabolic process | 5.82E-04 |
| 34 | GO:0006011: UDP-glucose metabolic process | 5.82E-04 |
| 35 | GO:0000913: preprophase band assembly | 5.82E-04 |
| 36 | GO:0031022: nuclear migration along microfilament | 5.82E-04 |
| 37 | GO:0006000: fructose metabolic process | 5.82E-04 |
| 38 | GO:0043447: alkane biosynthetic process | 5.82E-04 |
| 39 | GO:0009658: chloroplast organization | 6.88E-04 |
| 40 | GO:0080092: regulation of pollen tube growth | 7.69E-04 |
| 41 | GO:0009800: cinnamic acid biosynthetic process | 8.33E-04 |
| 42 | GO:0006168: adenine salvage | 8.33E-04 |
| 43 | GO:0032877: positive regulation of DNA endoreduplication | 8.33E-04 |
| 44 | GO:0046836: glycolipid transport | 8.33E-04 |
| 45 | GO:0006166: purine ribonucleoside salvage | 8.33E-04 |
| 46 | GO:0042631: cellular response to water deprivation | 1.05E-03 |
| 47 | GO:2000122: negative regulation of stomatal complex development | 1.10E-03 |
| 48 | GO:0010037: response to carbon dioxide | 1.10E-03 |
| 49 | GO:0015976: carbon utilization | 1.10E-03 |
| 50 | GO:0009765: photosynthesis, light harvesting | 1.10E-03 |
| 51 | GO:0045727: positive regulation of translation | 1.10E-03 |
| 52 | GO:0043097: pyrimidine nucleoside salvage | 1.40E-03 |
| 53 | GO:0006564: L-serine biosynthetic process | 1.40E-03 |
| 54 | GO:0009904: chloroplast accumulation movement | 1.40E-03 |
| 55 | GO:0006097: glyoxylate cycle | 1.40E-03 |
| 56 | GO:0044209: AMP salvage | 1.40E-03 |
| 57 | GO:0006559: L-phenylalanine catabolic process | 1.72E-03 |
| 58 | GO:0006206: pyrimidine nucleobase metabolic process | 1.72E-03 |
| 59 | GO:0009635: response to herbicide | 1.72E-03 |
| 60 | GO:0010942: positive regulation of cell death | 1.72E-03 |
| 61 | GO:0009082: branched-chain amino acid biosynthetic process | 2.06E-03 |
| 62 | GO:0009099: valine biosynthetic process | 2.06E-03 |
| 63 | GO:0009903: chloroplast avoidance movement | 2.06E-03 |
| 64 | GO:0009854: oxidative photosynthetic carbon pathway | 2.06E-03 |
| 65 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.06E-03 |
| 66 | GO:0009645: response to low light intensity stimulus | 2.42E-03 |
| 67 | GO:0018298: protein-chromophore linkage | 2.59E-03 |
| 68 | GO:0000160: phosphorelay signal transduction system | 2.72E-03 |
| 69 | GO:0009850: auxin metabolic process | 2.80E-03 |
| 70 | GO:0052543: callose deposition in cell wall | 2.80E-03 |
| 71 | GO:0048564: photosystem I assembly | 2.80E-03 |
| 72 | GO:0008610: lipid biosynthetic process | 2.80E-03 |
| 73 | GO:0042742: defense response to bacterium | 3.14E-03 |
| 74 | GO:0009097: isoleucine biosynthetic process | 3.21E-03 |
| 75 | GO:0032544: plastid translation | 3.21E-03 |
| 76 | GO:0009699: phenylpropanoid biosynthetic process | 3.21E-03 |
| 77 | GO:0006002: fructose 6-phosphate metabolic process | 3.21E-03 |
| 78 | GO:0071482: cellular response to light stimulus | 3.21E-03 |
| 79 | GO:0009853: photorespiration | 3.27E-03 |
| 80 | GO:0009735: response to cytokinin | 3.56E-03 |
| 81 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.63E-03 |
| 82 | GO:0000373: Group II intron splicing | 3.63E-03 |
| 83 | GO:0000902: cell morphogenesis | 3.63E-03 |
| 84 | GO:0006098: pentose-phosphate shunt | 3.63E-03 |
| 85 | GO:0006839: mitochondrial transport | 3.73E-03 |
| 86 | GO:0009638: phototropism | 4.06E-03 |
| 87 | GO:0000272: polysaccharide catabolic process | 4.99E-03 |
| 88 | GO:0046777: protein autophosphorylation | 5.61E-03 |
| 89 | GO:0006108: malate metabolic process | 5.98E-03 |
| 90 | GO:0009725: response to hormone | 5.98E-03 |
| 91 | GO:0009767: photosynthetic electron transport chain | 5.98E-03 |
| 92 | GO:0005986: sucrose biosynthetic process | 5.98E-03 |
| 93 | GO:0046686: response to cadmium ion | 6.82E-03 |
| 94 | GO:0005985: sucrose metabolic process | 7.04E-03 |
| 95 | GO:0042343: indole glucosinolate metabolic process | 7.04E-03 |
| 96 | GO:0010025: wax biosynthetic process | 7.59E-03 |
| 97 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.59E-03 |
| 98 | GO:0009751: response to salicylic acid | 8.31E-03 |
| 99 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.74E-03 |
| 100 | GO:0098542: defense response to other organism | 9.34E-03 |
| 101 | GO:0016226: iron-sulfur cluster assembly | 9.96E-03 |
| 102 | GO:0006730: one-carbon metabolic process | 9.96E-03 |
| 103 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.96E-03 |
| 104 | GO:0006817: phosphate ion transport | 1.12E-02 |
| 105 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.21E-02 |
| 106 | GO:0042335: cuticle development | 1.25E-02 |
| 107 | GO:0080022: primary root development | 1.25E-02 |
| 108 | GO:0010118: stomatal movement | 1.25E-02 |
| 109 | GO:0006520: cellular amino acid metabolic process | 1.32E-02 |
| 110 | GO:0015986: ATP synthesis coupled proton transport | 1.39E-02 |
| 111 | GO:0007018: microtubule-based movement | 1.39E-02 |
| 112 | GO:0007623: circadian rhythm | 1.40E-02 |
| 113 | GO:0019252: starch biosynthetic process | 1.46E-02 |
| 114 | GO:0009791: post-embryonic development | 1.46E-02 |
| 115 | GO:0002229: defense response to oomycetes | 1.54E-02 |
| 116 | GO:0016032: viral process | 1.61E-02 |
| 117 | GO:0048235: pollen sperm cell differentiation | 1.61E-02 |
| 118 | GO:0010468: regulation of gene expression | 1.67E-02 |
| 119 | GO:1901657: glycosyl compound metabolic process | 1.68E-02 |
| 120 | GO:0000910: cytokinesis | 1.92E-02 |
| 121 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.07E-02 |
| 122 | GO:0005975: carbohydrate metabolic process | 2.22E-02 |
| 123 | GO:0010411: xyloglucan metabolic process | 2.24E-02 |
| 124 | GO:0048481: plant ovule development | 2.41E-02 |
| 125 | GO:0009817: defense response to fungus, incompatible interaction | 2.41E-02 |
| 126 | GO:0007049: cell cycle | 2.42E-02 |
| 127 | GO:0009407: toxin catabolic process | 2.58E-02 |
| 128 | GO:0010119: regulation of stomatal movement | 2.67E-02 |
| 129 | GO:0080167: response to karrikin | 2.69E-02 |
| 130 | GO:0016051: carbohydrate biosynthetic process | 2.85E-02 |
| 131 | GO:0009637: response to blue light | 2.85E-02 |
| 132 | GO:0006099: tricarboxylic acid cycle | 2.94E-02 |
| 133 | GO:0015979: photosynthesis | 3.07E-02 |
| 134 | GO:0045454: cell redox homeostasis | 3.22E-02 |
| 135 | GO:0009744: response to sucrose | 3.42E-02 |
| 136 | GO:0000209: protein polyubiquitination | 3.51E-02 |
| 137 | GO:0009644: response to high light intensity | 3.61E-02 |
| 138 | GO:0009636: response to toxic substance | 3.71E-02 |
| 139 | GO:0006364: rRNA processing | 4.22E-02 |
| 140 | GO:0009736: cytokinin-activated signaling pathway | 4.22E-02 |
| 141 | GO:0030154: cell differentiation | 4.68E-02 |
| 142 | GO:0006096: glycolytic process | 4.75E-02 |
| 143 | GO:0048316: seed development | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 2 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 3 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 4 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 6 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 7 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 8 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 9 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 10 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 11 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 12 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 13 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 14 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 15 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.80E-08 |
| 16 | GO:0048038: quinone binding | 4.02E-06 |
| 17 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.03E-05 |
| 18 | GO:0004033: aldo-keto reductase (NADP) activity | 1.13E-04 |
| 19 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 1.56E-04 |
| 20 | GO:0003984: acetolactate synthase activity | 1.56E-04 |
| 21 | GO:0004328: formamidase activity | 1.56E-04 |
| 22 | GO:0008252: nucleotidase activity | 1.56E-04 |
| 23 | GO:0090422: thiamine pyrophosphate transporter activity | 1.56E-04 |
| 24 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.86E-04 |
| 25 | GO:0008967: phosphoglycolate phosphatase activity | 3.55E-04 |
| 26 | GO:0010291: carotene beta-ring hydroxylase activity | 3.55E-04 |
| 27 | GO:0010297: heteropolysaccharide binding | 3.55E-04 |
| 28 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.55E-04 |
| 29 | GO:0004047: aminomethyltransferase activity | 3.55E-04 |
| 30 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.55E-04 |
| 31 | GO:0000064: L-ornithine transmembrane transporter activity | 3.55E-04 |
| 32 | GO:0004089: carbonate dehydratase activity | 3.74E-04 |
| 33 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 5.82E-04 |
| 34 | GO:0070402: NADPH binding | 5.82E-04 |
| 35 | GO:0045548: phenylalanine ammonia-lyase activity | 5.82E-04 |
| 36 | GO:0032947: protein complex scaffold | 5.82E-04 |
| 37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.82E-04 |
| 38 | GO:0003999: adenine phosphoribosyltransferase activity | 8.33E-04 |
| 39 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.33E-04 |
| 40 | GO:0009882: blue light photoreceptor activity | 8.33E-04 |
| 41 | GO:0017089: glycolipid transporter activity | 8.33E-04 |
| 42 | GO:0004737: pyruvate decarboxylase activity | 1.10E-03 |
| 43 | GO:0051861: glycolipid binding | 1.10E-03 |
| 44 | GO:0008453: alanine-glyoxylate transaminase activity | 1.10E-03 |
| 45 | GO:0042578: phosphoric ester hydrolase activity | 1.72E-03 |
| 46 | GO:0016615: malate dehydrogenase activity | 1.72E-03 |
| 47 | GO:0030976: thiamine pyrophosphate binding | 1.72E-03 |
| 48 | GO:0004332: fructose-bisphosphate aldolase activity | 1.72E-03 |
| 49 | GO:0030060: L-malate dehydrogenase activity | 2.06E-03 |
| 50 | GO:0004849: uridine kinase activity | 2.06E-03 |
| 51 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.06E-03 |
| 52 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.06E-03 |
| 53 | GO:0004564: beta-fructofuranosidase activity | 2.80E-03 |
| 54 | GO:0008135: translation factor activity, RNA binding | 3.21E-03 |
| 55 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.21E-03 |
| 56 | GO:0004575: sucrose alpha-glucosidase activity | 4.06E-03 |
| 57 | GO:0004860: protein kinase inhibitor activity | 4.99E-03 |
| 58 | GO:0051287: NAD binding | 5.09E-03 |
| 59 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.98E-03 |
| 60 | GO:0000155: phosphorelay sensor kinase activity | 5.98E-03 |
| 61 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 6.48E-03 |
| 62 | GO:0008266: poly(U) RNA binding | 6.50E-03 |
| 63 | GO:0008146: sulfotransferase activity | 7.04E-03 |
| 64 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 7.43E-03 |
| 65 | GO:0031409: pigment binding | 7.59E-03 |
| 66 | GO:0051536: iron-sulfur cluster binding | 8.16E-03 |
| 67 | GO:0043424: protein histidine kinase binding | 8.74E-03 |
| 68 | GO:0004176: ATP-dependent peptidase activity | 9.34E-03 |
| 69 | GO:0019843: rRNA binding | 1.01E-02 |
| 70 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.04E-02 |
| 71 | GO:0005506: iron ion binding | 1.16E-02 |
| 72 | GO:0010181: FMN binding | 1.39E-02 |
| 73 | GO:0050662: coenzyme binding | 1.39E-02 |
| 74 | GO:0004872: receptor activity | 1.46E-02 |
| 75 | GO:0019901: protein kinase binding | 1.46E-02 |
| 76 | GO:0004518: nuclease activity | 1.61E-02 |
| 77 | GO:0000156: phosphorelay response regulator activity | 1.68E-02 |
| 78 | GO:0016759: cellulose synthase activity | 1.76E-02 |
| 79 | GO:0042802: identical protein binding | 1.78E-02 |
| 80 | GO:0016491: oxidoreductase activity | 1.80E-02 |
| 81 | GO:0008483: transaminase activity | 1.84E-02 |
| 82 | GO:0016597: amino acid binding | 1.92E-02 |
| 83 | GO:0016413: O-acetyltransferase activity | 1.92E-02 |
| 84 | GO:0016168: chlorophyll binding | 2.07E-02 |
| 85 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.16E-02 |
| 86 | GO:0004683: calmodulin-dependent protein kinase activity | 2.24E-02 |
| 87 | GO:0102483: scopolin beta-glucosidase activity | 2.24E-02 |
| 88 | GO:0050660: flavin adenine dinucleotide binding | 2.51E-02 |
| 89 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.58E-02 |
| 90 | GO:0004222: metalloendopeptidase activity | 2.58E-02 |
| 91 | GO:0050897: cobalt ion binding | 2.67E-02 |
| 92 | GO:0003746: translation elongation factor activity | 2.85E-02 |
| 93 | GO:0003993: acid phosphatase activity | 2.94E-02 |
| 94 | GO:0008422: beta-glucosidase activity | 3.04E-02 |
| 95 | GO:0004364: glutathione transferase activity | 3.32E-02 |
| 96 | GO:0015293: symporter activity | 3.71E-02 |
| 97 | GO:0005198: structural molecule activity | 3.71E-02 |
| 98 | GO:0005509: calcium ion binding | 3.82E-02 |
| 99 | GO:0044212: transcription regulatory region DNA binding | 4.22E-02 |
| 100 | GO:0031625: ubiquitin protein ligase binding | 4.54E-02 |
| 101 | GO:0003777: microtubule motor activity | 4.54E-02 |
| 102 | GO:0003824: catalytic activity | 4.73E-02 |
| 103 | GO:0004674: protein serine/threonine kinase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.11E-21 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.31E-13 |
| 4 | GO:0009941: chloroplast envelope | 4.31E-11 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.24E-10 |
| 6 | GO:0009570: chloroplast stroma | 1.62E-06 |
| 7 | GO:0048046: apoplast | 2.84E-06 |
| 8 | GO:0009534: chloroplast thylakoid | 5.39E-06 |
| 9 | GO:0005960: glycine cleavage complex | 1.03E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.56E-04 |
| 11 | GO:0009782: photosystem I antenna complex | 1.56E-04 |
| 12 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.55E-04 |
| 13 | GO:0030095: chloroplast photosystem II | 4.23E-04 |
| 14 | GO:0009509: chromoplast | 5.82E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 6.43E-04 |
| 16 | GO:0005775: vacuolar lumen | 8.33E-04 |
| 17 | GO:0031969: chloroplast membrane | 9.50E-04 |
| 18 | GO:0009579: thylakoid | 1.25E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 1.30E-03 |
| 20 | GO:0010287: plastoglobule | 1.40E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 1.50E-03 |
| 22 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.72E-03 |
| 23 | GO:0010319: stromule | 1.78E-03 |
| 24 | GO:0016021: integral component of membrane | 2.39E-03 |
| 25 | GO:0016324: apical plasma membrane | 4.52E-03 |
| 26 | GO:0005777: peroxisome | 5.03E-03 |
| 27 | GO:0019013: viral nucleocapsid | 5.98E-03 |
| 28 | GO:0030076: light-harvesting complex | 7.04E-03 |
| 29 | GO:0009706: chloroplast inner membrane | 8.06E-03 |
| 30 | GO:0042651: thylakoid membrane | 8.74E-03 |
| 31 | GO:0005623: cell | 1.04E-02 |
| 32 | GO:0005871: kinesin complex | 1.19E-02 |
| 33 | GO:0009504: cell plate | 1.46E-02 |
| 34 | GO:0005694: chromosome | 1.61E-02 |
| 35 | GO:0030529: intracellular ribonucleoprotein complex | 1.99E-02 |
| 36 | GO:0009707: chloroplast outer membrane | 2.41E-02 |
| 37 | GO:0005829: cytosol | 2.58E-02 |
| 38 | GO:0000325: plant-type vacuole | 2.67E-02 |
| 39 | GO:0005819: spindle | 3.04E-02 |
| 40 | GO:0031902: late endosome membrane | 3.22E-02 |
| 41 | GO:0031977: thylakoid lumen | 3.22E-02 |
| 42 | GO:0005743: mitochondrial inner membrane | 3.68E-02 |
| 43 | GO:0016020: membrane | 3.72E-02 |
| 44 | GO:0005747: mitochondrial respiratory chain complex I | 4.86E-02 |