Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G40990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:0046865: terpenoid transport0.00E+00
3GO:0051238: sequestering of metal ion0.00E+00
4GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
5GO:0006182: cGMP biosynthetic process0.00E+00
6GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
7GO:0010055: atrichoblast differentiation0.00E+00
8GO:0043201: response to leucine0.00E+00
9GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
10GO:0080053: response to phenylalanine0.00E+00
11GO:0080052: response to histidine0.00E+00
12GO:0006468: protein phosphorylation1.48E-07
13GO:0009617: response to bacterium2.29E-06
14GO:0071456: cellular response to hypoxia3.06E-06
15GO:0042742: defense response to bacterium4.08E-06
16GO:0002238: response to molecule of fungal origin1.16E-05
17GO:0006952: defense response2.57E-05
18GO:0010120: camalexin biosynthetic process6.21E-05
19GO:0006536: glutamate metabolic process1.90E-04
20GO:0009636: response to toxic substance2.53E-04
21GO:0002237: response to molecule of bacterial origin2.99E-04
22GO:0007165: signal transduction4.19E-04
23GO:0010200: response to chitin4.54E-04
24GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.36E-04
25GO:0009620: response to fungus5.82E-04
26GO:0032491: detection of molecule of fungal origin6.07E-04
27GO:0042759: long-chain fatty acid biosynthetic process6.07E-04
28GO:0032107: regulation of response to nutrient levels6.07E-04
29GO:0051938: L-glutamate import6.07E-04
30GO:1990641: response to iron ion starvation6.07E-04
31GO:0099132: ATP hydrolysis coupled cation transmembrane transport6.07E-04
32GO:0010726: positive regulation of hydrogen peroxide metabolic process6.07E-04
33GO:0010421: hydrogen peroxide-mediated programmed cell death6.07E-04
34GO:0006562: proline catabolic process6.07E-04
35GO:1901183: positive regulation of camalexin biosynthetic process6.07E-04
36GO:0009407: toxin catabolic process6.44E-04
37GO:0032259: methylation9.14E-04
38GO:0009751: response to salicylic acid9.74E-04
39GO:0010204: defense response signaling pathway, resistance gene-independent1.04E-03
40GO:0010112: regulation of systemic acquired resistance1.24E-03
41GO:0006423: cysteinyl-tRNA aminoacylation1.31E-03
42GO:0019441: tryptophan catabolic process to kynurenine1.31E-03
43GO:0043091: L-arginine import1.31E-03
44GO:0051592: response to calcium ion1.31E-03
45GO:0080183: response to photooxidative stress1.31E-03
46GO:0018022: peptidyl-lysine methylation1.31E-03
47GO:0010133: proline catabolic process to glutamate1.31E-03
48GO:0015802: basic amino acid transport1.31E-03
49GO:0009805: coumarin biosynthetic process1.31E-03
50GO:0006101: citrate metabolic process1.31E-03
51GO:0002240: response to molecule of oomycetes origin1.31E-03
52GO:0043066: negative regulation of apoptotic process1.31E-03
53GO:0044419: interspecies interaction between organisms1.31E-03
54GO:0042939: tripeptide transport1.31E-03
55GO:0043069: negative regulation of programmed cell death1.71E-03
56GO:0009682: induced systemic resistance1.98E-03
57GO:0006556: S-adenosylmethionine biosynthetic process2.15E-03
58GO:0010351: lithium ion transport2.15E-03
59GO:0015692: lead ion transport2.15E-03
60GO:0080168: abscisic acid transport2.15E-03
61GO:0034051: negative regulation of plant-type hypersensitive response2.15E-03
62GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway2.15E-03
63GO:0006790: sulfur compound metabolic process2.27E-03
64GO:0012501: programmed cell death2.27E-03
65GO:0006882: cellular zinc ion homeostasis3.12E-03
66GO:0046513: ceramide biosynthetic process3.12E-03
67GO:0010116: positive regulation of abscisic acid biosynthetic process3.12E-03
68GO:0019438: aromatic compound biosynthetic process3.12E-03
69GO:0033169: histone H3-K9 demethylation3.12E-03
70GO:0006537: glutamate biosynthetic process3.12E-03
71GO:0050832: defense response to fungus3.20E-03
72GO:0070588: calcium ion transmembrane transport3.27E-03
73GO:0046854: phosphatidylinositol phosphorylation3.27E-03
74GO:0009817: defense response to fungus, incompatible interaction3.31E-03
75GO:0000162: tryptophan biosynthetic process3.65E-03
76GO:0080142: regulation of salicylic acid biosynthetic process4.21E-03
77GO:0042938: dipeptide transport4.21E-03
78GO:0045227: capsule polysaccharide biosynthetic process4.21E-03
79GO:0046345: abscisic acid catabolic process4.21E-03
80GO:0045088: regulation of innate immune response4.21E-03
81GO:0033358: UDP-L-arabinose biosynthetic process4.21E-03
82GO:0006874: cellular calcium ion homeostasis4.48E-03
83GO:0003333: amino acid transmembrane transport4.93E-03
84GO:0016998: cell wall macromolecule catabolic process4.93E-03
85GO:0006097: glyoxylate cycle5.41E-03
86GO:0007029: endoplasmic reticulum organization5.41E-03
87GO:0030308: negative regulation of cell growth5.41E-03
88GO:0000304: response to singlet oxygen5.41E-03
89GO:0009697: salicylic acid biosynthetic process5.41E-03
90GO:0034052: positive regulation of plant-type hypersensitive response5.41E-03
91GO:0030041: actin filament polymerization5.41E-03
92GO:0006631: fatty acid metabolic process5.60E-03
93GO:0051707: response to other organism6.22E-03
94GO:0006979: response to oxidative stress6.32E-03
95GO:0006561: proline biosynthetic process6.71E-03
96GO:0010942: positive regulation of cell death6.71E-03
97GO:0015691: cadmium ion transport6.71E-03
98GO:0010256: endomembrane system organization6.71E-03
99GO:0006555: methionine metabolic process6.71E-03
100GO:1900425: negative regulation of defense response to bacterium6.71E-03
101GO:0055114: oxidation-reduction process7.26E-03
102GO:0010150: leaf senescence7.36E-03
103GO:0006855: drug transmembrane transport7.58E-03
104GO:0010555: response to mannitol8.11E-03
105GO:2000067: regulation of root morphogenesis8.11E-03
106GO:0071470: cellular response to osmotic stress8.11E-03
107GO:0019509: L-methionine salvage from methylthioadenosine8.11E-03
108GO:0045926: negative regulation of growth8.11E-03
109GO:0042538: hyperosmotic salinity response8.33E-03
110GO:0007166: cell surface receptor signaling pathway9.03E-03
111GO:0009809: lignin biosynthetic process9.12E-03
112GO:0009851: auxin biosynthetic process9.39E-03
113GO:0050829: defense response to Gram-negative bacterium9.61E-03
114GO:1902074: response to salt9.61E-03
115GO:1900056: negative regulation of leaf senescence9.61E-03
116GO:0019745: pentacyclic triterpenoid biosynthetic process9.61E-03
117GO:0030026: cellular manganese ion homeostasis9.61E-03
118GO:1900057: positive regulation of leaf senescence9.61E-03
119GO:0000122: negative regulation of transcription from RNA polymerase II promoter9.61E-03
120GO:0010193: response to ozone1.01E-02
121GO:0002229: defense response to oomycetes1.01E-02
122GO:0006102: isocitrate metabolic process1.12E-02
123GO:0010928: regulation of auxin mediated signaling pathway1.12E-02
124GO:0030091: protein repair1.12E-02
125GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.12E-02
126GO:0009850: auxin metabolic process1.12E-02
127GO:0043068: positive regulation of programmed cell death1.12E-02
128GO:1900150: regulation of defense response to fungus1.12E-02
129GO:0010252: auxin homeostasis1.22E-02
130GO:0009808: lignin metabolic process1.29E-02
131GO:0009699: phenylpropanoid biosynthetic process1.29E-02
132GO:0007186: G-protein coupled receptor signaling pathway1.29E-02
133GO:0009615: response to virus1.46E-02
134GO:0007338: single fertilization1.46E-02
135GO:0009821: alkaloid biosynthetic process1.46E-02
136GO:0051865: protein autoubiquitination1.46E-02
137GO:0009816: defense response to bacterium, incompatible interaction1.55E-02
138GO:0008202: steroid metabolic process1.65E-02
139GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.65E-02
140GO:0006032: chitin catabolic process1.84E-02
141GO:0009688: abscisic acid biosynthetic process1.84E-02
142GO:0055062: phosphate ion homeostasis1.84E-02
143GO:0007064: mitotic sister chromatid cohesion1.84E-02
144GO:0009870: defense response signaling pathway, resistance gene-dependent1.84E-02
145GO:0008219: cell death1.92E-02
146GO:0080167: response to karrikin1.98E-02
147GO:0009750: response to fructose2.04E-02
148GO:0009089: lysine biosynthetic process via diaminopimelate2.04E-02
149GO:0052544: defense response by callose deposition in cell wall2.04E-02
150GO:0006499: N-terminal protein myristoylation2.11E-02
151GO:0016310: phosphorylation2.18E-02
152GO:0000266: mitochondrial fission2.25E-02
153GO:0002213: defense response to insect2.25E-02
154GO:2000028: regulation of photoperiodism, flowering2.46E-02
155GO:0055046: microgametogenesis2.46E-02
156GO:0009718: anthocyanin-containing compound biosynthetic process2.46E-02
157GO:0006626: protein targeting to mitochondrion2.46E-02
158GO:0006633: fatty acid biosynthetic process2.54E-02
159GO:0010143: cutin biosynthetic process2.68E-02
160GO:0010053: root epidermal cell differentiation2.91E-02
161GO:0009969: xyloglucan biosynthetic process2.91E-02
162GO:0009225: nucleotide-sugar metabolic process2.91E-02
163GO:0042542: response to hydrogen peroxide3.01E-02
164GO:0010025: wax biosynthetic process3.15E-02
165GO:0005992: trehalose biosynthetic process3.39E-02
166GO:0080147: root hair cell development3.39E-02
167GO:0030150: protein import into mitochondrial matrix3.39E-02
168GO:0009737: response to abscisic acid3.46E-02
169GO:0009753: response to jasmonic acid3.89E-02
170GO:0006812: cation transport3.93E-02
171GO:0009846: pollen germination3.93E-02
172GO:0046686: response to cadmium ion3.99E-02
173GO:0030433: ubiquitin-dependent ERAD pathway4.14E-02
174GO:0006730: one-carbon metabolic process4.14E-02
175GO:0019748: secondary metabolic process4.14E-02
176GO:0010227: floral organ abscission4.41E-02
177GO:0006012: galactose metabolic process4.41E-02
178GO:0009693: ethylene biosynthetic process4.41E-02
179GO:0010584: pollen exine formation4.68E-02
180GO:0009561: megagametogenesis4.68E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
4GO:0016301: kinase activity1.62E-10
5GO:0004674: protein serine/threonine kinase activity4.26E-08
6GO:0005524: ATP binding4.71E-07
7GO:0005496: steroid binding6.20E-06
8GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.59E-06
9GO:0102391: decanoate--CoA ligase activity1.96E-05
10GO:0004467: long-chain fatty acid-CoA ligase activity3.04E-05
11GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity5.29E-05
12GO:0005516: calmodulin binding1.01E-04
13GO:0004351: glutamate decarboxylase activity1.11E-04
14GO:0008171: O-methyltransferase activity1.38E-04
15GO:0004364: glutathione transferase activity1.85E-04
16GO:0010279: indole-3-acetic acid amido synthetase activity1.90E-04
17GO:0050660: flavin adenine dinucleotide binding3.56E-04
18GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.36E-04
19GO:0031219: levanase activity6.07E-04
20GO:0031957: very long-chain fatty acid-CoA ligase activity6.07E-04
21GO:0010285: L,L-diaminopimelate aminotransferase activity6.07E-04
22GO:0031127: alpha-(1,2)-fucosyltransferase activity6.07E-04
23GO:0004425: indole-3-glycerol-phosphate synthase activity6.07E-04
24GO:0033984: indole-3-glycerol-phosphate lyase activity6.07E-04
25GO:0051669: fructan beta-fructosidase activity6.07E-04
26GO:0004657: proline dehydrogenase activity6.07E-04
27GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity6.07E-04
28GO:0030145: manganese ion binding6.93E-04
29GO:0009055: electron carrier activity1.17E-03
30GO:0042937: tripeptide transporter activity1.31E-03
31GO:0032454: histone demethylase activity (H3-K9 specific)1.31E-03
32GO:0004103: choline kinase activity1.31E-03
33GO:0004566: beta-glucuronidase activity1.31E-03
34GO:0050291: sphingosine N-acyltransferase activity1.31E-03
35GO:0010297: heteropolysaccharide binding1.31E-03
36GO:0003994: aconitate hydratase activity1.31E-03
37GO:0004817: cysteine-tRNA ligase activity1.31E-03
38GO:0032934: sterol binding1.31E-03
39GO:0004061: arylformamidase activity1.31E-03
40GO:0050736: O-malonyltransferase activity1.31E-03
41GO:0031683: G-protein beta/gamma-subunit complex binding2.15E-03
42GO:0004383: guanylate cyclase activity2.15E-03
43GO:0016805: dipeptidase activity2.15E-03
44GO:0016595: glutamate binding2.15E-03
45GO:0004478: methionine adenosyltransferase activity2.15E-03
46GO:0001664: G-protein coupled receptor binding2.15E-03
47GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity2.15E-03
48GO:0042409: caffeoyl-CoA O-methyltransferase activity2.15E-03
49GO:0045735: nutrient reservoir activity2.40E-03
50GO:0005388: calcium-transporting ATPase activity2.58E-03
51GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.10E-03
52GO:0010178: IAA-amino acid conjugate hydrolase activity3.12E-03
53GO:0042299: lupeol synthase activity3.12E-03
54GO:0015189: L-lysine transmembrane transporter activity3.12E-03
55GO:0015181: arginine transmembrane transporter activity3.12E-03
56GO:0016866: intramolecular transferase activity4.21E-03
57GO:0009916: alternative oxidase activity4.21E-03
58GO:0016279: protein-lysine N-methyltransferase activity4.21E-03
59GO:0015368: calcium:cation antiporter activity4.21E-03
60GO:0050373: UDP-arabinose 4-epimerase activity4.21E-03
61GO:0004834: tryptophan synthase activity4.21E-03
62GO:0042936: dipeptide transporter activity4.21E-03
63GO:0015369: calcium:proton antiporter activity4.21E-03
64GO:0005313: L-glutamate transmembrane transporter activity4.21E-03
65GO:0004031: aldehyde oxidase activity4.21E-03
66GO:0050302: indole-3-acetaldehyde oxidase activity4.21E-03
67GO:0004040: amidase activity5.41E-03
68GO:0010294: abscisic acid glucosyltransferase activity5.41E-03
69GO:0004866: endopeptidase inhibitor activity6.71E-03
70GO:0047714: galactolipase activity6.71E-03
71GO:0003978: UDP-glucose 4-epimerase activity8.11E-03
72GO:0004656: procollagen-proline 4-dioxygenase activity8.11E-03
73GO:0004723: calcium-dependent protein serine/threonine phosphatase activity8.11E-03
74GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.11E-03
75GO:0051920: peroxiredoxin activity8.11E-03
76GO:0033743: peptide-methionine (R)-S-oxide reductase activity8.11E-03
77GO:0046872: metal ion binding9.58E-03
78GO:0005085: guanyl-nucleotide exchange factor activity9.61E-03
79GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity9.61E-03
80GO:0008235: metalloexopeptidase activity9.61E-03
81GO:0015491: cation:cation antiporter activity1.12E-02
82GO:0004714: transmembrane receptor protein tyrosine kinase activity1.12E-02
83GO:0004564: beta-fructofuranosidase activity1.12E-02
84GO:0016209: antioxidant activity1.12E-02
85GO:0052747: sinapyl alcohol dehydrogenase activity1.12E-02
86GO:0004033: aldo-keto reductase (NADP) activity1.12E-02
87GO:0008142: oxysterol binding1.29E-02
88GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.29E-02
89GO:0008168: methyltransferase activity1.35E-02
90GO:0005509: calcium ion binding1.36E-02
91GO:0008417: fucosyltransferase activity1.46E-02
92GO:0004672: protein kinase activity1.51E-02
93GO:0031490: chromatin DNA binding1.65E-02
94GO:0016844: strictosidine synthase activity1.65E-02
95GO:0004575: sucrose alpha-glucosidase activity1.65E-02
96GO:0015174: basic amino acid transmembrane transporter activity1.65E-02
97GO:0030247: polysaccharide binding1.73E-02
98GO:0004683: calmodulin-dependent protein kinase activity1.73E-02
99GO:0004568: chitinase activity1.84E-02
100GO:0004713: protein tyrosine kinase activity1.84E-02
101GO:0030246: carbohydrate binding1.87E-02
102GO:0015238: drug transmembrane transporter activity2.01E-02
103GO:0004177: aminopeptidase activity2.04E-02
104GO:0008559: xenobiotic-transporting ATPase activity2.04E-02
105GO:0030170: pyridoxal phosphate binding2.18E-02
106GO:0045551: cinnamyl-alcohol dehydrogenase activity2.25E-02
107GO:0000976: transcription regulatory region sequence-specific DNA binding2.25E-02
108GO:0052689: carboxylic ester hydrolase activity2.29E-02
109GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.43E-02
110GO:0005262: calcium channel activity2.46E-02
111GO:0015114: phosphate ion transmembrane transporter activity2.46E-02
112GO:0015266: protein channel activity2.46E-02
113GO:0004022: alcohol dehydrogenase (NAD) activity2.46E-02
114GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.62E-02
115GO:0004871: signal transducer activity2.77E-02
116GO:0004970: ionotropic glutamate receptor activity2.91E-02
117GO:0005217: intracellular ligand-gated ion channel activity2.91E-02
118GO:0004190: aspartic-type endopeptidase activity2.91E-02
119GO:0030552: cAMP binding2.91E-02
120GO:0004867: serine-type endopeptidase inhibitor activity2.91E-02
121GO:0030553: cGMP binding2.91E-02
122GO:0031418: L-ascorbic acid binding3.39E-02
123GO:0051537: 2 iron, 2 sulfur cluster binding3.39E-02
124GO:0003954: NADH dehydrogenase activity3.39E-02
125GO:0001046: core promoter sequence-specific DNA binding3.39E-02
126GO:0005216: ion channel activity3.63E-02
127GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.85E-02
128GO:0004707: MAP kinase activity3.89E-02
129GO:0020037: heme binding4.09E-02
130GO:0015171: amino acid transmembrane transporter activity4.66E-02
131GO:0004499: N,N-dimethylaniline monooxygenase activity4.68E-02
132GO:0004601: peroxidase activity4.90E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.53E-10
2GO:0005886: plasma membrane2.04E-09
3GO:0005783: endoplasmic reticulum1.00E-04
4GO:0005911: cell-cell junction6.07E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane1.31E-03
6GO:0005765: lysosomal membrane1.98E-03
7GO:0009530: primary cell wall2.15E-03
8GO:0070062: extracellular exosome3.12E-03
9GO:0005576: extracellular region3.14E-03
10GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane4.21E-03
11GO:0030660: Golgi-associated vesicle membrane4.21E-03
12GO:0032588: trans-Golgi network membrane6.71E-03
13GO:0005770: late endosome8.13E-03
14GO:0031305: integral component of mitochondrial inner membrane1.12E-02
15GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.12E-02
16GO:0032580: Golgi cisterna membrane1.22E-02
17GO:0005829: cytosol1.28E-02
18GO:0000325: plant-type vacuole2.22E-02
19GO:0070469: respiratory chain3.63E-02
20GO:0005789: endoplasmic reticulum membrane3.84E-02
21GO:0005744: mitochondrial inner membrane presequence translocase complex4.68E-02
<
Gene type



Gene DE type