GO Enrichment Analysis of Co-expressed Genes with
AT5G40770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043462: regulation of ATPase activity | 0.00E+00 |
| 2 | GO:0044794: positive regulation by host of viral process | 0.00E+00 |
| 3 | GO:0071034: CUT catabolic process | 0.00E+00 |
| 4 | GO:0000467: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response | 0.00E+00 |
| 6 | GO:0071049: nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription | 0.00E+00 |
| 7 | GO:0043928: exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay | 0.00E+00 |
| 8 | GO:0071035: nuclear polyadenylation-dependent rRNA catabolic process | 0.00E+00 |
| 9 | GO:0071038: nuclear polyadenylation-dependent tRNA catabolic process | 0.00E+00 |
| 10 | GO:0006457: protein folding | 2.85E-13 |
| 11 | GO:0046686: response to cadmium ion | 1.56E-08 |
| 12 | GO:0061077: chaperone-mediated protein folding | 6.57E-08 |
| 13 | GO:0006458: 'de novo' protein folding | 8.35E-08 |
| 14 | GO:0009408: response to heat | 9.15E-08 |
| 15 | GO:0045041: protein import into mitochondrial intermembrane space | 2.70E-07 |
| 16 | GO:0006189: 'de novo' IMP biosynthetic process | 4.53E-07 |
| 17 | GO:0006164: purine nucleotide biosynthetic process | 2.48E-06 |
| 18 | GO:0051131: chaperone-mediated protein complex assembly | 2.48E-06 |
| 19 | GO:0042026: protein refolding | 1.76E-05 |
| 20 | GO:0090332: stomatal closure | 6.19E-05 |
| 21 | GO:0010450: inflorescence meristem growth | 6.91E-05 |
| 22 | GO:0000494: box C/D snoRNA 3'-end processing | 6.91E-05 |
| 23 | GO:1990258: histone glutamine methylation | 6.91E-05 |
| 24 | GO:0048448: stamen morphogenesis | 6.91E-05 |
| 25 | GO:0006099: tricarboxylic acid cycle | 8.33E-05 |
| 26 | GO:1905182: positive regulation of urease activity | 1.66E-04 |
| 27 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 1.66E-04 |
| 28 | GO:0060149: negative regulation of posttranscriptional gene silencing | 1.66E-04 |
| 29 | GO:0048833: specification of floral organ number | 1.66E-04 |
| 30 | GO:0034475: U4 snRNA 3'-end processing | 1.66E-04 |
| 31 | GO:0051252: regulation of RNA metabolic process | 1.66E-04 |
| 32 | GO:0000027: ribosomal large subunit assembly | 1.94E-04 |
| 33 | GO:0010187: negative regulation of seed germination | 1.94E-04 |
| 34 | GO:0007005: mitochondrion organization | 2.61E-04 |
| 35 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 2.81E-04 |
| 36 | GO:0055074: calcium ion homeostasis | 2.81E-04 |
| 37 | GO:0006954: inflammatory response | 2.81E-04 |
| 38 | GO:1902626: assembly of large subunit precursor of preribosome | 2.81E-04 |
| 39 | GO:0009113: purine nucleobase biosynthetic process | 4.06E-04 |
| 40 | GO:0000460: maturation of 5.8S rRNA | 5.42E-04 |
| 41 | GO:0010286: heat acclimation | 6.19E-04 |
| 42 | GO:0006412: translation | 6.26E-04 |
| 43 | GO:0031167: rRNA methylation | 6.87E-04 |
| 44 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 8.40E-04 |
| 45 | GO:0009651: response to salt stress | 9.51E-04 |
| 46 | GO:0009423: chorismate biosynthetic process | 9.99E-04 |
| 47 | GO:0042254: ribosome biogenesis | 1.00E-03 |
| 48 | GO:0009061: anaerobic respiration | 1.34E-03 |
| 49 | GO:0000028: ribosomal small subunit assembly | 1.34E-03 |
| 50 | GO:0050821: protein stabilization | 1.34E-03 |
| 51 | GO:0009880: embryonic pattern specification | 1.53E-03 |
| 52 | GO:0001510: RNA methylation | 1.53E-03 |
| 53 | GO:0098656: anion transmembrane transport | 1.73E-03 |
| 54 | GO:0046685: response to arsenic-containing substance | 1.73E-03 |
| 55 | GO:0006379: mRNA cleavage | 1.73E-03 |
| 56 | GO:0006364: rRNA processing | 1.90E-03 |
| 57 | GO:0000387: spliceosomal snRNP assembly | 1.93E-03 |
| 58 | GO:0010162: seed dormancy process | 2.14E-03 |
| 59 | GO:0051555: flavonol biosynthetic process | 2.14E-03 |
| 60 | GO:0006913: nucleocytoplasmic transport | 2.36E-03 |
| 61 | GO:0009073: aromatic amino acid family biosynthetic process | 2.36E-03 |
| 62 | GO:0043085: positive regulation of catalytic activity | 2.36E-03 |
| 63 | GO:0006820: anion transport | 2.58E-03 |
| 64 | GO:0006807: nitrogen compound metabolic process | 2.82E-03 |
| 65 | GO:0006626: protein targeting to mitochondrion | 2.82E-03 |
| 66 | GO:0048467: gynoecium development | 3.06E-03 |
| 67 | GO:0080188: RNA-directed DNA methylation | 3.30E-03 |
| 68 | GO:0046688: response to copper ion | 3.30E-03 |
| 69 | GO:0034976: response to endoplasmic reticulum stress | 3.56E-03 |
| 70 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.81E-03 |
| 71 | GO:0009735: response to cytokinin | 3.82E-03 |
| 72 | GO:0006825: copper ion transport | 4.08E-03 |
| 73 | GO:0006413: translational initiation | 4.31E-03 |
| 74 | GO:0098542: defense response to other organism | 4.35E-03 |
| 75 | GO:0006334: nucleosome assembly | 4.35E-03 |
| 76 | GO:0009814: defense response, incompatible interaction | 4.63E-03 |
| 77 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.63E-03 |
| 78 | GO:0009294: DNA mediated transformation | 4.91E-03 |
| 79 | GO:0070417: cellular response to cold | 5.50E-03 |
| 80 | GO:0009617: response to bacterium | 5.51E-03 |
| 81 | GO:0008033: tRNA processing | 5.80E-03 |
| 82 | GO:0034220: ion transmembrane transport | 5.80E-03 |
| 83 | GO:0000413: protein peptidyl-prolyl isomerization | 5.80E-03 |
| 84 | GO:0010197: polar nucleus fusion | 6.11E-03 |
| 85 | GO:0048868: pollen tube development | 6.11E-03 |
| 86 | GO:0016032: viral process | 7.40E-03 |
| 87 | GO:0032502: developmental process | 7.40E-03 |
| 88 | GO:0009567: double fertilization forming a zygote and endosperm | 8.08E-03 |
| 89 | GO:0009911: positive regulation of flower development | 9.13E-03 |
| 90 | GO:0009615: response to virus | 9.13E-03 |
| 91 | GO:0009816: defense response to bacterium, incompatible interaction | 9.50E-03 |
| 92 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.02E-02 |
| 93 | GO:0048573: photoperiodism, flowering | 1.02E-02 |
| 94 | GO:0006950: response to stress | 1.02E-02 |
| 95 | GO:0009853: photorespiration | 1.30E-02 |
| 96 | GO:0015031: protein transport | 1.42E-02 |
| 97 | GO:0051707: response to other organism | 1.56E-02 |
| 98 | GO:0000154: rRNA modification | 1.69E-02 |
| 99 | GO:0009965: leaf morphogenesis | 1.69E-02 |
| 100 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.97E-02 |
| 101 | GO:0009555: pollen development | 2.33E-02 |
| 102 | GO:0009553: embryo sac development | 2.42E-02 |
| 103 | GO:0000398: mRNA splicing, via spliceosome | 2.74E-02 |
| 104 | GO:0009793: embryo development ending in seed dormancy | 3.02E-02 |
| 105 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.16E-02 |
| 106 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.95E-02 |
| 107 | GO:0006351: transcription, DNA-templated | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 4 | GO:0051082: unfolded protein binding | 8.93E-16 |
| 5 | GO:0044183: protein binding involved in protein folding | 1.11E-06 |
| 6 | GO:0030515: snoRNA binding | 2.41E-05 |
| 7 | GO:0003735: structural constituent of ribosome | 5.69E-05 |
| 8 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 6.91E-05 |
| 9 | GO:0048037: cofactor binding | 6.91E-05 |
| 10 | GO:0030611: arsenate reductase activity | 6.91E-05 |
| 11 | GO:1990259: histone-glutamine methyltransferase activity | 6.91E-05 |
| 12 | GO:0031072: heat shock protein binding | 1.19E-04 |
| 13 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.66E-04 |
| 14 | GO:0008428: ribonuclease inhibitor activity | 1.66E-04 |
| 15 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 1.66E-04 |
| 16 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.66E-04 |
| 17 | GO:0005507: copper ion binding | 2.29E-04 |
| 18 | GO:0004298: threonine-type endopeptidase activity | 2.38E-04 |
| 19 | GO:0070180: large ribosomal subunit rRNA binding | 2.81E-04 |
| 20 | GO:0016151: nickel cation binding | 2.81E-04 |
| 21 | GO:0016531: copper chaperone activity | 2.81E-04 |
| 22 | GO:0008649: rRNA methyltransferase activity | 2.81E-04 |
| 23 | GO:0003924: GTPase activity | 3.14E-04 |
| 24 | GO:0005524: ATP binding | 3.26E-04 |
| 25 | GO:0008948: oxaloacetate decarboxylase activity | 6.87E-04 |
| 26 | GO:0000104: succinate dehydrogenase activity | 6.87E-04 |
| 27 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 6.87E-04 |
| 28 | GO:0002020: protease binding | 6.87E-04 |
| 29 | GO:0003729: mRNA binding | 8.91E-04 |
| 30 | GO:0046872: metal ion binding | 9.85E-04 |
| 31 | GO:0050897: cobalt ion binding | 1.02E-03 |
| 32 | GO:0003746: translation elongation factor activity | 1.12E-03 |
| 33 | GO:0015288: porin activity | 1.34E-03 |
| 34 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.34E-03 |
| 35 | GO:0008308: voltage-gated anion channel activity | 1.53E-03 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.65E-03 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.90E-03 |
| 38 | GO:0001055: RNA polymerase II activity | 1.93E-03 |
| 39 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.36E-03 |
| 40 | GO:0001054: RNA polymerase I activity | 2.36E-03 |
| 41 | GO:0001056: RNA polymerase III activity | 2.58E-03 |
| 42 | GO:0004725: protein tyrosine phosphatase activity | 3.56E-03 |
| 43 | GO:0004407: histone deacetylase activity | 3.81E-03 |
| 44 | GO:0005528: FK506 binding | 3.81E-03 |
| 45 | GO:0000166: nucleotide binding | 4.28E-03 |
| 46 | GO:0035251: UDP-glucosyltransferase activity | 4.35E-03 |
| 47 | GO:0004540: ribonuclease activity | 4.35E-03 |
| 48 | GO:0003723: RNA binding | 5.01E-03 |
| 49 | GO:0003756: protein disulfide isomerase activity | 5.20E-03 |
| 50 | GO:0003743: translation initiation factor activity | 5.39E-03 |
| 51 | GO:0004527: exonuclease activity | 6.11E-03 |
| 52 | GO:0016853: isomerase activity | 6.42E-03 |
| 53 | GO:0010181: FMN binding | 6.42E-03 |
| 54 | GO:0005525: GTP binding | 8.05E-03 |
| 55 | GO:0008233: peptidase activity | 8.70E-03 |
| 56 | GO:0015250: water channel activity | 9.13E-03 |
| 57 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.10E-02 |
| 58 | GO:0042393: histone binding | 1.43E-02 |
| 59 | GO:0043621: protein self-association | 1.65E-02 |
| 60 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.32E-02 |
| 61 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.32E-02 |
| 62 | GO:0016758: transferase activity, transferring hexosyl groups | 2.84E-02 |
| 63 | GO:0019843: rRNA binding | 2.90E-02 |
| 64 | GO:0016829: lyase activity | 3.07E-02 |
| 65 | GO:0008194: UDP-glycosyltransferase activity | 3.95E-02 |
| 66 | GO:0005509: calcium ion binding | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 8.16E-11 |
| 4 | GO:0005774: vacuolar membrane | 3.33E-10 |
| 5 | GO:0005829: cytosol | 5.27E-10 |
| 6 | GO:0005618: cell wall | 9.68E-09 |
| 7 | GO:0022626: cytosolic ribosome | 9.36E-06 |
| 8 | GO:0005739: mitochondrion | 1.15E-05 |
| 9 | GO:0031428: box C/D snoRNP complex | 1.23E-05 |
| 10 | GO:0045273: respiratory chain complex II | 3.18E-05 |
| 11 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 3.18E-05 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 3.91E-05 |
| 13 | GO:0000418: DNA-directed RNA polymerase IV complex | 7.43E-05 |
| 14 | GO:0005852: eukaryotic translation initiation factor 3 complex | 8.80E-05 |
| 15 | GO:0032040: small-subunit processome | 1.03E-04 |
| 16 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.03E-04 |
| 17 | GO:0009506: plasmodesma | 1.37E-04 |
| 18 | GO:0030089: phycobilisome | 1.66E-04 |
| 19 | GO:0000177: cytoplasmic exosome (RNase complex) | 1.66E-04 |
| 20 | GO:0000419: DNA-directed RNA polymerase V complex | 1.74E-04 |
| 21 | GO:0005758: mitochondrial intermembrane space | 1.94E-04 |
| 22 | GO:0005839: proteasome core complex | 2.38E-04 |
| 23 | GO:0034719: SMN-Sm protein complex | 2.81E-04 |
| 24 | GO:0000176: nuclear exosome (RNase complex) | 2.81E-04 |
| 25 | GO:0005840: ribosome | 4.81E-04 |
| 26 | GO:0005759: mitochondrial matrix | 5.06E-04 |
| 27 | GO:0005682: U5 snRNP | 5.42E-04 |
| 28 | GO:0005773: vacuole | 6.53E-04 |
| 29 | GO:0097526: spliceosomal tri-snRNP complex | 6.87E-04 |
| 30 | GO:0005687: U4 snRNP | 6.87E-04 |
| 31 | GO:0005737: cytoplasm | 9.87E-04 |
| 32 | GO:0005689: U12-type spliceosomal complex | 9.99E-04 |
| 33 | GO:0071004: U2-type prespliceosome | 1.34E-03 |
| 34 | GO:0022625: cytosolic large ribosomal subunit | 1.35E-03 |
| 35 | GO:0046930: pore complex | 1.53E-03 |
| 36 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.53E-03 |
| 37 | GO:0005736: DNA-directed RNA polymerase I complex | 1.73E-03 |
| 38 | GO:0005685: U1 snRNP | 1.73E-03 |
| 39 | GO:0005763: mitochondrial small ribosomal subunit | 1.73E-03 |
| 40 | GO:0000502: proteasome complex | 1.90E-03 |
| 41 | GO:0015030: Cajal body | 1.93E-03 |
| 42 | GO:0005666: DNA-directed RNA polymerase III complex | 1.93E-03 |
| 43 | GO:0071011: precatalytic spliceosome | 1.93E-03 |
| 44 | GO:0005686: U2 snRNP | 2.14E-03 |
| 45 | GO:0005747: mitochondrial respiratory chain complex I | 2.32E-03 |
| 46 | GO:0071013: catalytic step 2 spliceosome | 2.36E-03 |
| 47 | GO:0019013: viral nucleocapsid | 2.82E-03 |
| 48 | GO:0005886: plasma membrane | 3.00E-03 |
| 49 | GO:0009507: chloroplast | 3.28E-03 |
| 50 | GO:0009570: chloroplast stroma | 3.56E-03 |
| 51 | GO:0005783: endoplasmic reticulum | 4.03E-03 |
| 52 | GO:0045271: respiratory chain complex I | 4.08E-03 |
| 53 | GO:0048046: apoplast | 4.24E-03 |
| 54 | GO:0005741: mitochondrial outer membrane | 4.35E-03 |
| 55 | GO:0016592: mediator complex | 7.40E-03 |
| 56 | GO:0015934: large ribosomal subunit | 1.22E-02 |
| 57 | GO:0009536: plastid | 1.36E-02 |
| 58 | GO:0031966: mitochondrial membrane | 1.83E-02 |
| 59 | GO:0005681: spliceosomal complex | 2.17E-02 |
| 60 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.63E-02 |
| 61 | GO:0005654: nucleoplasm | 2.84E-02 |
| 62 | GO:0022627: cytosolic small ribosomal subunit | 4.45E-02 |