co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G40280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0006793: phosphorus metabolic process	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:1990641: response to iron ion starvation	9.14E-05
9	GO:0010265: SCF complex assembly	9.14E-05
10	GO:0034975: protein folding in endoplasmic reticulum	9.14E-05
11	GO:0043069: negative regulation of programmed cell death	1.13E-04
12	GO:0006423: cysteinyl-tRNA aminoacylation	2.16E-04
13	GO:0006101: citrate metabolic process	2.16E-04
14	GO:0043066: negative regulation of apoptotic process	2.16E-04
15	GO:1902000: homogentisate catabolic process	2.16E-04
16	GO:0019441: tryptophan catabolic process to kynurenine	2.16E-04
17	GO:0051592: response to calcium ion	2.16E-04
18	GO:0010351: lithium ion transport	3.61E-04
19	GO:0010272: response to silver ion	3.61E-04
20	GO:0009072: aromatic amino acid family metabolic process	3.61E-04
21	GO:0046686: response to cadmium ion	4.41E-04
22	GO:0006952: defense response	4.93E-04
23	GO:0006882: cellular zinc ion homeostasis	5.20E-04
24	GO:0010116: positive regulation of abscisic acid biosynthetic process	5.20E-04
25	GO:0006097: glyoxylate cycle	8.73E-04
26	GO:0007029: endoplasmic reticulum organization	8.73E-04
27	GO:0010150: leaf senescence	9.06E-04
28	GO:0009615: response to virus	9.86E-04
29	GO:0002238: response to molecule of fungal origin	1.07E-03
30	GO:0006014: D-ribose metabolic process	1.07E-03
31	GO:0006561: proline biosynthetic process	1.07E-03
32	GO:0006468: protein phosphorylation	1.10E-03
33	GO:0071470: cellular response to osmotic stress	1.27E-03
34	GO:0009407: toxin catabolic process	1.40E-03
35	GO:0006744: ubiquinone biosynthetic process	1.49E-03
36	GO:1900056: negative regulation of leaf senescence	1.49E-03
37	GO:0030026: cellular manganese ion homeostasis	1.49E-03
38	GO:1902074: response to salt	1.49E-03
39	GO:0010928: regulation of auxin mediated signaling pathway	1.72E-03
40	GO:0009819: drought recovery	1.72E-03
41	GO:0006506: GPI anchor biosynthetic process	1.72E-03
42	GO:0043068: positive regulation of programmed cell death	1.72E-03
43	GO:0006102: isocitrate metabolic process	1.72E-03
44	GO:0015996: chlorophyll catabolic process	1.96E-03
45	GO:0010120: camalexin biosynthetic process	1.96E-03
46	GO:0006526: arginine biosynthetic process	1.96E-03
47	GO:0030968: endoplasmic reticulum unfolded protein response	1.96E-03
48	GO:0017004: cytochrome complex assembly	1.96E-03
49	GO:0009821: alkaloid biosynthetic process	2.21E-03
50	GO:0051865: protein autoubiquitination	2.21E-03
51	GO:0007338: single fertilization	2.21E-03
52	GO:0008202: steroid metabolic process	2.48E-03
53	GO:0055062: phosphate ion homeostasis	2.75E-03
54	GO:0006032: chitin catabolic process	2.75E-03
55	GO:0052544: defense response by callose deposition in cell wall	3.03E-03
56	GO:0043085: positive regulation of catalytic activity	3.03E-03
57	GO:0000272: polysaccharide catabolic process	3.03E-03
58	GO:0000038: very long-chain fatty acid metabolic process	3.03E-03
59	GO:0012501: programmed cell death	3.32E-03
60	GO:0002213: defense response to insect	3.32E-03
61	GO:0015706: nitrate transport	3.32E-03
62	GO:2000028: regulation of photoperiodism, flowering	3.63E-03
63	GO:0009718: anthocyanin-containing compound biosynthetic process	3.63E-03
64	GO:0042742: defense response to bacterium	3.89E-03
65	GO:0010143: cutin biosynthetic process	3.93E-03
66	GO:0010167: response to nitrate	4.26E-03
67	GO:0070588: calcium ion transmembrane transport	4.26E-03
68	GO:0010053: root epidermal cell differentiation	4.26E-03
69	GO:0000162: tryptophan biosynthetic process	4.58E-03
70	GO:0010025: wax biosynthetic process	4.58E-03
71	GO:2000377: regulation of reactive oxygen species metabolic process	4.92E-03
72	GO:0005992: trehalose biosynthetic process	4.92E-03
73	GO:0006874: cellular calcium ion homeostasis	5.27E-03
74	GO:0009695: jasmonic acid biosynthetic process	5.27E-03
75	GO:0031408: oxylipin biosynthetic process	5.62E-03
76	GO:0003333: amino acid transmembrane transport	5.62E-03
77	GO:0016998: cell wall macromolecule catabolic process	5.62E-03
78	GO:0006633: fatty acid biosynthetic process	6.10E-03
79	GO:0009611: response to wounding	7.09E-03
80	GO:0010087: phloem or xylem histogenesis	7.51E-03
81	GO:0007166: cell surface receptor signaling pathway	7.66E-03
82	GO:0006662: glycerol ether metabolic process	7.91E-03
83	GO:0048544: recognition of pollen	8.32E-03
84	GO:0006814: sodium ion transport	8.32E-03
85	GO:0042752: regulation of circadian rhythm	8.32E-03
86	GO:0019252: starch biosynthetic process	8.74E-03
87	GO:0009851: auxin biosynthetic process	8.74E-03
88	GO:0007264: small GTPase mediated signal transduction	9.60E-03
89	GO:0009630: gravitropism	9.60E-03
90	GO:0006464: cellular protein modification process	1.05E-02
91	GO:0009567: double fertilization forming a zygote and endosperm	1.05E-02
92	GO:0009607: response to biotic stimulus	1.23E-02
93	GO:0009627: systemic acquired resistance	1.28E-02
94	GO:0042128: nitrate assimilation	1.28E-02
95	GO:0010200: response to chitin	1.33E-02
96	GO:0008219: cell death	1.43E-02
97	GO:0045454: cell redox homeostasis	1.54E-02
98	GO:0006499: N-terminal protein myristoylation	1.54E-02
99	GO:0007568: aging	1.59E-02
100	GO:0006865: amino acid transport	1.64E-02
101	GO:0009867: jasmonic acid mediated signaling pathway	1.69E-02
102	GO:0016051: carbohydrate biosynthetic process	1.69E-02
103	GO:0034599: cellular response to oxidative stress	1.75E-02
104	GO:0006099: tricarboxylic acid cycle	1.75E-02
105	GO:0006631: fatty acid metabolic process	1.91E-02
106	GO:0042542: response to hydrogen peroxide	1.97E-02
107	GO:0009753: response to jasmonic acid	2.05E-02
108	GO:0009636: response to toxic substance	2.20E-02
109	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.32E-02
110	GO:0006812: cation transport	2.38E-02
111	GO:0042538: hyperosmotic salinity response	2.38E-02
112	GO:0009809: lignin biosynthetic process	2.51E-02
113	GO:0010224: response to UV-B	2.57E-02
114	GO:0009734: auxin-activated signaling pathway	2.69E-02
115	GO:0055114: oxidation-reduction process	2.70E-02
116	GO:0006096: glycolytic process	2.82E-02
117	GO:0009620: response to fungus	3.02E-02
118	GO:0009735: response to cytokinin	3.09E-02
119	GO:0009624: response to nematode	3.22E-02
120	GO:0009738: abscisic acid-activated signaling pathway	3.27E-02
121	GO:0009058: biosynthetic process	3.93E-02
122	GO:0040008: regulation of growth	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
6	GO:0033984: indole-3-glycerol-phosphate lyase activity	9.14E-05
7	GO:0031957: very long-chain fatty acid-CoA ligase activity	9.14E-05
8	GO:0004321: fatty-acyl-CoA synthase activity	9.14E-05
9	GO:0005524: ATP binding	9.31E-05
10	GO:0004022: alcohol dehydrogenase (NAD) activity	1.77E-04
11	GO:0004817: cysteine-tRNA ligase activity	2.16E-04
12	GO:0032934: sterol binding	2.16E-04
13	GO:0004061: arylformamidase activity	2.16E-04
14	GO:0015036: disulfide oxidoreductase activity	2.16E-04
15	GO:0004103: choline kinase activity	2.16E-04
16	GO:0003994: aconitate hydratase activity	2.16E-04
17	GO:0016301: kinase activity	3.07E-04
18	GO:0016805: dipeptidase activity	3.61E-04
19	GO:0005093: Rab GDP-dissociation inhibitor activity	3.61E-04
20	GO:0008430: selenium binding	3.61E-04
21	GO:0015035: protein disulfide oxidoreductase activity	4.75E-04
22	GO:0070628: proteasome binding	6.90E-04
23	GO:0015368: calcium:cation antiporter activity	6.90E-04
24	GO:0004834: tryptophan synthase activity	6.90E-04
25	GO:0015369: calcium:proton antiporter activity	6.90E-04
26	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.86E-04
27	GO:0102391: decanoate--CoA ligase activity	1.27E-03
28	GO:0004747: ribokinase activity	1.27E-03
29	GO:0004674: protein serine/threonine kinase activity	1.28E-03
30	GO:0008235: metalloexopeptidase activity	1.49E-03
31	GO:0004467: long-chain fatty acid-CoA ligase activity	1.49E-03
32	GO:0008865: fructokinase activity	1.72E-03
33	GO:0052747: sinapyl alcohol dehydrogenase activity	1.72E-03
34	GO:0015491: cation:cation antiporter activity	1.72E-03
35	GO:0008142: oxysterol binding	1.96E-03
36	GO:0004364: glutathione transferase activity	1.97E-03
37	GO:0016207: 4-coumarate-CoA ligase activity	2.21E-03
38	GO:0030955: potassium ion binding	2.48E-03
39	GO:0016844: strictosidine synthase activity	2.48E-03
40	GO:0015112: nitrate transmembrane transporter activity	2.48E-03
41	GO:0004743: pyruvate kinase activity	2.48E-03
42	GO:0004713: protein tyrosine kinase activity	2.75E-03
43	GO:0004568: chitinase activity	2.75E-03
44	GO:0008047: enzyme activator activity	2.75E-03
45	GO:0008794: arsenate reductase (glutaredoxin) activity	3.03E-03
46	GO:0004177: aminopeptidase activity	3.03E-03
47	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.32E-03
48	GO:0005388: calcium-transporting ATPase activity	3.63E-03
49	GO:0005262: calcium channel activity	3.63E-03
50	GO:0008061: chitin binding	4.26E-03
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.24E-03
52	GO:0003756: protein disulfide isomerase activity	6.73E-03
53	GO:0047134: protein-disulfide reductase activity	7.11E-03
54	GO:0050662: coenzyme binding	8.32E-03
55	GO:0004791: thioredoxin-disulfide reductase activity	8.32E-03
56	GO:0008237: metallopeptidase activity	1.09E-02
57	GO:0043531: ADP binding	1.14E-02
58	GO:0005516: calmodulin binding	1.16E-02
59	GO:0030247: polysaccharide binding	1.33E-02
60	GO:0004683: calmodulin-dependent protein kinase activity	1.33E-02
61	GO:0061630: ubiquitin protein ligase activity	1.36E-02
62	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.38E-02
63	GO:0005096: GTPase activator activity	1.48E-02
64	GO:0005509: calcium ion binding	1.52E-02
65	GO:0030145: manganese ion binding	1.59E-02
66	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.80E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	1.86E-02
68	GO:0016491: oxidoreductase activity	2.39E-02
69	GO:0016298: lipase activity	2.57E-02
70	GO:0015171: amino acid transmembrane transporter activity	2.70E-02
71	GO:0031625: ubiquitin protein ligase binding	2.70E-02
72	GO:0016874: ligase activity	3.09E-02
73	GO:0004252: serine-type endopeptidase activity	4.07E-02
74	GO:0016740: transferase activity	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	1.48E-04
2	GO:0031314: extrinsic component of mitochondrial inner membrane	2.16E-04
3	GO:0005789: endoplasmic reticulum membrane	4.24E-04
4	GO:0031461: cullin-RING ubiquitin ligase complex	5.20E-04
5	GO:0005746: mitochondrial respiratory chain	8.73E-04
6	GO:0000794: condensed nuclear chromosome	1.49E-03
7	GO:0005886: plasma membrane	2.04E-03
8	GO:0005783: endoplasmic reticulum	2.75E-03
9	GO:0016021: integral component of membrane	3.60E-03
10	GO:0005839: proteasome core complex	5.62E-03
11	GO:0000151: ubiquitin ligase complex	1.43E-02
12	GO:0005743: mitochondrial inner membrane	1.77E-02
13	GO:0005819: spindle	1.80E-02
14	GO:0031966: mitochondrial membrane	2.38E-02
15	GO:0005635: nuclear envelope	2.63E-02
16	GO:0009706: chloroplast inner membrane	3.22E-02
17	GO:0005777: peroxisome	3.88E-02
18	GO:0009524: phragmoplast	3.93E-02
19	GO:0005773: vacuole	4.69E-02
20	GO:0009705: plant-type vacuole membrane	4.75E-02