Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090706: specification of plant organ position0.00E+00
2GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
3GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
4GO:0043007: maintenance of rDNA7.41E-06
5GO:0010450: inflorescence meristem growth7.41E-06
6GO:0015790: UDP-xylose transport2.00E-05
7GO:0045165: cell fate commitment3.67E-05
8GO:0009405: pathogenesis3.67E-05
9GO:1902183: regulation of shoot apical meristem development1.04E-04
10GO:0010158: abaxial cell fate specification1.04E-04
11GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.30E-04
12GO:0009228: thiamine biosynthetic process1.30E-04
13GO:0010093: specification of floral organ identity2.52E-04
14GO:2000024: regulation of leaf development2.85E-04
15GO:0009933: meristem structural organization5.02E-04
16GO:0010030: positive regulation of seed germination5.40E-04
17GO:0009944: polarity specification of adaxial/abaxial axis6.20E-04
18GO:0006289: nucleotide-excision repair6.20E-04
19GO:0016114: terpenoid biosynthetic process7.02E-04
20GO:0009789: positive regulation of abscisic acid-activated signaling pathway8.75E-04
21GO:0042631: cellular response to water deprivation9.19E-04
22GO:0010154: fruit development9.64E-04
23GO:0010193: response to ozone1.10E-03
24GO:0009734: auxin-activated signaling pathway1.17E-03
25GO:0015995: chlorophyll biosynthetic process1.56E-03
26GO:0016311: dephosphorylation1.61E-03
27GO:0008643: carbohydrate transport2.44E-03
28GO:0010224: response to UV-B2.89E-03
29GO:0009909: regulation of flower development3.03E-03
30GO:0040008: regulation of growth5.04E-03
31GO:0007623: circadian rhythm5.21E-03
32GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.63E-03
33GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.37E-03
34GO:0006869: lipid transport9.90E-03
35GO:0006281: DNA repair1.07E-02
36GO:0009555: pollen development1.61E-02
37GO:0009611: response to wounding1.64E-02
38GO:0009733: response to auxin2.90E-02
39GO:0009409: response to cold3.31E-02
40GO:0007275: multicellular organism development4.32E-02
RankGO TermAdjusted P value
1GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity2.00E-05
2GO:0005464: UDP-xylose transmembrane transporter activity2.00E-05
3GO:0090729: toxin activity3.67E-05
4GO:0070628: proteasome binding7.90E-05
5GO:0031593: polyubiquitin binding1.30E-04
6GO:0043130: ubiquitin binding6.20E-04
7GO:0008289: lipid binding1.15E-03
8GO:0003684: damaged DNA binding1.25E-03
9GO:0003993: acid phosphatase activity2.01E-03
10GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.23E-03
11GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.26E-03
12GO:0015297: antiporter activity5.04E-03
13GO:0004497: monooxygenase activity8.18E-03
14GO:0004722: protein serine/threonine phosphatase activity9.90E-03
15GO:0016740: transferase activity1.86E-02
16GO:0019825: oxygen binding2.07E-02
17GO:0005506: iron ion binding2.64E-02
18GO:0046872: metal ion binding2.78E-02
19GO:0005515: protein binding3.54E-02
20GO:0020037: heme binding3.69E-02
RankGO TermAdjusted P value
1GO:0030095: chloroplast photosystem II5.02E-04
2GO:0009543: chloroplast thylakoid lumen4.18E-03
3GO:0009534: chloroplast thylakoid1.84E-02
4GO:0009535: chloroplast thylakoid membrane4.74E-02
5GO:0016021: integral component of membrane4.85E-02
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Gene type



Gene DE type