Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
2GO:0017126: nucleologenesis0.00E+00
3GO:0080056: petal vascular tissue pattern formation0.00E+00
4GO:0080057: sepal vascular tissue pattern formation0.00E+00
5GO:0000731: DNA synthesis involved in DNA repair0.00E+00
6GO:0071578: zinc II ion transmembrane import0.00E+00
7GO:0000719: photoreactive repair7.70E-06
8GO:0061088: regulation of sequestering of zinc ion3.25E-05
9GO:0006014: D-ribose metabolic process5.52E-05
10GO:0048280: vesicle fusion with Golgi apparatus6.80E-05
11GO:0006261: DNA-dependent DNA replication1.11E-04
12GO:0006896: Golgi to vacuole transport1.60E-04
13GO:0043085: positive regulation of catalytic activity1.78E-04
14GO:0010588: cotyledon vascular tissue pattern formation2.14E-04
15GO:0051302: regulation of cell division3.11E-04
16GO:0009411: response to UV3.73E-04
17GO:0009306: protein secretion3.94E-04
18GO:0042147: retrograde transport, endosome to Golgi4.16E-04
19GO:0010305: leaf vascular tissue pattern formation4.60E-04
20GO:0019252: starch biosynthetic process5.05E-04
21GO:0006623: protein targeting to vacuole5.05E-04
22GO:0006891: intra-Golgi vesicle-mediated transport5.27E-04
23GO:0009630: gravitropism5.50E-04
24GO:0006904: vesicle docking involved in exocytosis6.21E-04
25GO:0006888: ER to Golgi vesicle-mediated transport7.44E-04
26GO:0010043: response to zinc ion8.71E-04
27GO:0006260: DNA replication1.23E-03
28GO:0006812: cation transport1.26E-03
29GO:0006364: rRNA processing1.32E-03
30GO:0048367: shoot system development1.50E-03
31GO:0009790: embryo development2.14E-03
32GO:0006470: protein dephosphorylation2.61E-03
33GO:0042254: ribosome biogenesis3.25E-03
34GO:0048366: leaf development3.58E-03
35GO:0006281: DNA repair4.84E-03
36GO:0048364: root development4.98E-03
37GO:0015031: protein transport1.40E-02
38GO:0009409: response to cold1.46E-02
39GO:0005975: carbohydrate metabolic process1.59E-02
RankGO TermAdjusted P value
1GO:0019211: phosphatase activator activity0.00E+00
2GO:0008420: CTD phosphatase activity5.52E-05
3GO:0015562: efflux transmembrane transporter activity5.52E-05
4GO:0004747: ribokinase activity6.80E-05
5GO:0008865: fructokinase activity9.62E-05
6GO:0003887: DNA-directed DNA polymerase activity2.71E-04
7GO:0005385: zinc ion transmembrane transporter activity2.91E-04
8GO:0008324: cation transmembrane transporter activity3.11E-04
9GO:0016853: isomerase activity4.82E-04
10GO:0004872: receptor activity5.05E-04
11GO:0016791: phosphatase activity5.98E-04
12GO:0004721: phosphoprotein phosphatase activity7.44E-04
13GO:0030145: manganese ion binding8.71E-04
14GO:0000149: SNARE binding9.77E-04
15GO:0005484: SNAP receptor activity1.09E-03
16GO:0008565: protein transporter activity2.17E-03
17GO:0004722: protein serine/threonine phosphatase activity4.47E-03
18GO:0003729: mRNA binding1.56E-02
19GO:0003676: nucleic acid binding3.24E-02
RankGO TermAdjusted P value
1GO:0043625: delta DNA polymerase complex2.75E-06
2GO:0030140: trans-Golgi network transport vesicle5.52E-05
3GO:0012507: ER to Golgi transport vesicle membrane9.62E-05
4GO:0000775: chromosome, centromeric region3.52E-04
5GO:0005770: late endosome4.60E-04
6GO:0005694: chromosome5.50E-04
7GO:0000325: plant-type vacuole8.71E-04
8GO:0031902: late endosome membrane1.03E-03
9GO:0031201: SNARE complex1.03E-03
10GO:0005829: cytosol1.95E-03
11GO:0005802: trans-Golgi network1.00E-02
12GO:0005789: endoplasmic reticulum membrane1.59E-02
13GO:0005730: nucleolus1.71E-02
14GO:0005774: vacuolar membrane2.86E-02
15GO:0005737: cytoplasm3.13E-02
16GO:0005773: vacuole3.88E-02
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Gene type



Gene DE type