co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G39020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
4	GO:0010401: pectic galactan metabolic process	0.00E+00
5	GO:0009992: cellular water homeostasis	0.00E+00
6	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
7	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
8	GO:0032324: molybdopterin cofactor biosynthetic process	0.00E+00
9	GO:0051553: flavone biosynthetic process	0.00E+00
10	GO:0006468: protein phosphorylation	1.41E-07
11	GO:0008219: cell death	5.59E-07
12	GO:0031348: negative regulation of defense response	1.07E-06
13	GO:0009817: defense response to fungus, incompatible interaction	1.69E-05
14	GO:0042742: defense response to bacterium	3.59E-05
15	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	4.89E-05
16	GO:0006470: protein dephosphorylation	5.53E-05
17	GO:0048544: recognition of pollen	9.29E-05
18	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.47E-04
19	GO:0098710: guanine import across plasma membrane	1.60E-04
20	GO:0016337: single organismal cell-cell adhesion	1.60E-04
21	GO:0048482: plant ovule morphogenesis	1.60E-04
22	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.60E-04
23	GO:0035344: hypoxanthine transport	1.60E-04
24	GO:0071366: cellular response to indolebutyric acid stimulus	1.60E-04
25	GO:0043985: histone H4-R3 methylation	1.60E-04
26	GO:0043687: post-translational protein modification	1.60E-04
27	GO:0006643: membrane lipid metabolic process	1.60E-04
28	GO:0002143: tRNA wobble position uridine thiolation	1.60E-04
29	GO:0032491: detection of molecule of fungal origin	1.60E-04
30	GO:0031338: regulation of vesicle fusion	1.60E-04
31	GO:0098721: uracil import across plasma membrane	1.60E-04
32	GO:0098702: adenine import across plasma membrane	1.60E-04
33	GO:0009816: defense response to bacterium, incompatible interaction	2.10E-04
34	GO:0009627: systemic acquired resistance	2.26E-04
35	GO:0009751: response to salicylic acid	3.43E-04
36	GO:0080185: effector dependent induction by symbiont of host immune response	3.65E-04
37	GO:0006024: glycosaminoglycan biosynthetic process	3.65E-04
38	GO:0050684: regulation of mRNA processing	3.65E-04
39	GO:0052541: plant-type cell wall cellulose metabolic process	3.65E-04
40	GO:0006212: uracil catabolic process	3.65E-04
41	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	3.65E-04
42	GO:0043066: negative regulation of apoptotic process	3.65E-04
43	GO:0019483: beta-alanine biosynthetic process	3.65E-04
44	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.65E-04
45	GO:0015012: heparan sulfate proteoglycan biosynthetic process	3.65E-04
46	GO:0009617: response to bacterium	4.90E-04
47	GO:0046621: negative regulation of organ growth	5.97E-04
48	GO:0006517: protein deglycosylation	5.97E-04
49	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	5.97E-04
50	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.97E-04
51	GO:0010498: proteasomal protein catabolic process	5.97E-04
52	GO:0042344: indole glucosinolate catabolic process	5.97E-04
53	GO:0032784: regulation of DNA-templated transcription, elongation	5.97E-04
54	GO:0042780: tRNA 3'-end processing	5.97E-04
55	GO:0090630: activation of GTPase activity	5.97E-04
56	GO:0031347: regulation of defense response	6.72E-04
57	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.98E-04
58	GO:0048194: Golgi vesicle budding	8.53E-04
59	GO:0009311: oligosaccharide metabolic process	8.53E-04
60	GO:0002239: response to oomycetes	8.53E-04
61	GO:0015749: monosaccharide transport	8.53E-04
62	GO:0010104: regulation of ethylene-activated signaling pathway	8.53E-04
63	GO:0072583: clathrin-dependent endocytosis	8.53E-04
64	GO:0006516: glycoprotein catabolic process	8.53E-04
65	GO:0002679: respiratory burst involved in defense response	8.53E-04
66	GO:0071323: cellular response to chitin	8.53E-04
67	GO:0006515: misfolded or incompletely synthesized protein catabolic process	8.53E-04
68	GO:0009620: response to fungus	1.06E-03
69	GO:0046777: protein autophosphorylation	1.11E-03
70	GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly	1.13E-03
71	GO:0060548: negative regulation of cell death	1.13E-03
72	GO:1902584: positive regulation of response to water deprivation	1.13E-03
73	GO:0071219: cellular response to molecule of bacterial origin	1.13E-03
74	GO:0010188: response to microbial phytotoxin	1.13E-03
75	GO:0006665: sphingolipid metabolic process	1.43E-03
76	GO:0006090: pyruvate metabolic process	1.43E-03
77	GO:0018279: protein N-linked glycosylation via asparagine	1.43E-03
78	GO:0002229: defense response to oomycetes	1.44E-03
79	GO:0015691: cadmium ion transport	1.76E-03
80	GO:0048317: seed morphogenesis	1.76E-03
81	GO:0043966: histone H3 acetylation	2.11E-03
82	GO:0010044: response to aluminum ion	2.48E-03
83	GO:0010161: red light signaling pathway	2.48E-03
84	GO:0046470: phosphatidylcholine metabolic process	2.48E-03
85	GO:1900056: negative regulation of leaf senescence	2.48E-03
86	GO:0009813: flavonoid biosynthetic process	2.82E-03
87	GO:0030162: regulation of proteolysis	2.88E-03
88	GO:0006875: cellular metal ion homeostasis	2.88E-03
89	GO:0032875: regulation of DNA endoreduplication	2.88E-03
90	GO:0043562: cellular response to nitrogen levels	3.29E-03
91	GO:0010093: specification of floral organ identity	3.29E-03
92	GO:0071482: cellular response to light stimulus	3.29E-03
93	GO:0045087: innate immune response	3.40E-03
94	GO:0009051: pentose-phosphate shunt, oxidative branch	3.72E-03
95	GO:0051865: protein autoubiquitination	3.72E-03
96	GO:0010112: regulation of systemic acquired resistance	3.72E-03
97	GO:0009086: methionine biosynthetic process	4.17E-03
98	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.17E-03
99	GO:0006995: cellular response to nitrogen starvation	4.64E-03
100	GO:0007064: mitotic sister chromatid cohesion	4.64E-03
101	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.64E-03
102	GO:0009682: induced systemic resistance	5.12E-03
103	GO:0052544: defense response by callose deposition in cell wall	5.12E-03
104	GO:0019684: photosynthesis, light reaction	5.12E-03
105	GO:0006352: DNA-templated transcription, initiation	5.12E-03
106	GO:0030148: sphingolipid biosynthetic process	5.12E-03
107	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	5.28E-03
108	GO:0071365: cellular response to auxin stimulus	5.62E-03
109	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.64E-03
110	GO:0010200: response to chitin	5.64E-03
111	GO:0006486: protein glycosylation	5.88E-03
112	GO:0055046: microgametogenesis	6.14E-03
113	GO:0006807: nitrogen compound metabolic process	6.14E-03
114	GO:0006108: malate metabolic process	6.14E-03
115	GO:2000028: regulation of photoperiodism, flowering	6.14E-03
116	GO:0080188: RNA-directed DNA methylation	7.22E-03
117	GO:0010030: positive regulation of seed germination	7.22E-03
118	GO:0009626: plant-type hypersensitive response	7.40E-03
119	GO:0009742: brassinosteroid mediated signaling pathway	8.87E-03
120	GO:0051260: protein homooligomerization	9.59E-03
121	GO:0031408: oxylipin biosynthetic process	9.59E-03
122	GO:0071456: cellular response to hypoxia	1.02E-02
123	GO:0009625: response to insect	1.09E-02
124	GO:0071215: cellular response to abscisic acid stimulus	1.09E-02
125	GO:0009561: megagametogenesis	1.15E-02
126	GO:0007165: signal transduction	1.21E-02
127	GO:0000413: protein peptidyl-prolyl isomerization	1.29E-02
128	GO:0010087: phloem or xylem histogenesis	1.29E-02
129	GO:0046323: glucose import	1.36E-02
130	GO:0006885: regulation of pH	1.36E-02
131	GO:0010193: response to ozone	1.58E-02
132	GO:0000302: response to reactive oxygen species	1.58E-02
133	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.62E-02
134	GO:0007166: cell surface receptor signaling pathway	1.66E-02
135	GO:0009738: abscisic acid-activated signaling pathway	1.76E-02
136	GO:0051607: defense response to virus	1.97E-02
137	GO:0001666: response to hypoxia	2.05E-02
138	GO:0009607: response to biotic stimulus	2.13E-02
139	GO:0016567: protein ubiquitination	2.30E-02
140	GO:0006950: response to stress	2.30E-02
141	GO:0016049: cell growth	2.39E-02
142	GO:0006952: defense response	2.44E-02
143	GO:0048366: leaf development	2.65E-02
144	GO:0006499: N-terminal protein myristoylation	2.65E-02
145	GO:0009867: jasmonic acid mediated signaling pathway	2.93E-02
146	GO:0006099: tricarboxylic acid cycle	3.02E-02
147	GO:0000209: protein polyubiquitination	3.61E-02
148	GO:0009737: response to abscisic acid	3.85E-02
149	GO:0006855: drug transmembrane transport	3.91E-02
150	GO:0016042: lipid catabolic process	3.99E-02
151	GO:0006812: cation transport	4.12E-02
152	GO:0006813: potassium ion transport	4.34E-02
153	GO:0009736: cytokinin-activated signaling pathway	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0015370: solute:sodium symporter activity	0.00E+00
3	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
4	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
7	GO:0061598: molybdopterin adenylyltransferase activity	0.00E+00
8	GO:0033746: histone demethylase activity (H3-R2 specific)	0.00E+00
9	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
10	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
11	GO:2001080: chitosan binding	0.00E+00
12	GO:0061599: molybdopterin molybdotransferase activity	0.00E+00
13	GO:0033749: histone demethylase activity (H4-R3 specific)	0.00E+00
14	GO:0005524: ATP binding	5.71E-07
15	GO:0004674: protein serine/threonine kinase activity	2.55E-06
16	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.30E-05
17	GO:0016301: kinase activity	1.67E-05
18	GO:0019199: transmembrane receptor protein kinase activity	2.01E-05
19	GO:0004672: protein kinase activity	2.03E-05
20	GO:0004012: phospholipid-translocating ATPase activity	6.84E-05
21	GO:0009679: hexose:proton symporter activity	1.60E-04
22	GO:0032050: clathrin heavy chain binding	1.60E-04
23	GO:1901149: salicylic acid binding	1.60E-04
24	GO:0015208: guanine transmembrane transporter activity	1.60E-04
25	GO:0015294: solute:cation symporter activity	1.60E-04
26	GO:0001102: RNA polymerase II activating transcription factor binding	1.60E-04
27	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.60E-04
28	GO:0015207: adenine transmembrane transporter activity	1.60E-04
29	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.60E-04
30	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	3.65E-04
31	GO:0045140: inositol phosphoceramide synthase activity	3.65E-04
32	GO:0030246: carbohydrate binding	3.81E-04
33	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	5.97E-04
34	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	5.97E-04
35	GO:0042781: 3'-tRNA processing endoribonuclease activity	5.97E-04
36	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.97E-04
37	GO:0004383: guanylate cyclase activity	5.97E-04
38	GO:0033612: receptor serine/threonine kinase binding	7.30E-04
39	GO:0001653: peptide receptor activity	8.53E-04
40	GO:0015086: cadmium ion transmembrane transporter activity	8.53E-04
41	GO:0004792: thiosulfate sulfurtransferase activity	8.53E-04
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.13E-03
43	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.13E-03
44	GO:0015210: uracil transmembrane transporter activity	1.13E-03
45	GO:0004470: malic enzyme activity	1.13E-03
46	GO:0004576: oligosaccharyl transferase activity	1.13E-03
47	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.13E-03
48	GO:0015204: urea transmembrane transporter activity	1.13E-03
49	GO:0030151: molybdenum ion binding	1.43E-03
50	GO:0045431: flavonol synthase activity	1.43E-03
51	GO:0015145: monosaccharide transmembrane transporter activity	1.43E-03
52	GO:0008641: small protein activating enzyme activity	1.43E-03
53	GO:0008948: oxaloacetate decarboxylase activity	1.43E-03
54	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.43E-03
55	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.43E-03
56	GO:0017137: Rab GTPase binding	1.43E-03
57	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.43E-03
58	GO:0004722: protein serine/threonine phosphatase activity	1.51E-03
59	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.17E-03
60	GO:0004620: phospholipase activity	2.48E-03
61	GO:0005096: GTPase activator activity	2.82E-03
62	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.88E-03
63	GO:0046872: metal ion binding	3.14E-03
64	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.20E-03
65	GO:0004630: phospholipase D activity	3.29E-03
66	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.29E-03
67	GO:0008417: fucosyltransferase activity	3.72E-03
68	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.72E-03
69	GO:0046982: protein heterodimerization activity	4.02E-03
70	GO:0000287: magnesium ion binding	4.02E-03
71	GO:0004713: protein tyrosine kinase activity	4.64E-03
72	GO:0047372: acylglycerol lipase activity	5.12E-03
73	GO:0031625: ubiquitin protein ligase binding	6.51E-03
74	GO:0017025: TBP-class protein binding	7.22E-03
75	GO:0008061: chitin binding	7.22E-03
76	GO:0004725: protein tyrosine phosphatase activity	7.79E-03
77	GO:0005516: calmodulin binding	8.02E-03
78	GO:0043130: ubiquitin binding	8.38E-03
79	GO:0035251: UDP-glucosyltransferase activity	9.59E-03
80	GO:0005515: protein binding	1.03E-02
81	GO:0005509: calcium ion binding	1.11E-02
82	GO:0015144: carbohydrate transmembrane transporter activity	1.26E-02
83	GO:0004402: histone acetyltransferase activity	1.29E-02
84	GO:0005451: monovalent cation:proton antiporter activity	1.29E-02
85	GO:0005351: sugar:proton symporter activity	1.42E-02
86	GO:0015299: solute:proton antiporter activity	1.43E-02
87	GO:0010181: FMN binding	1.43E-02
88	GO:0016887: ATPase activity	1.55E-02
89	GO:0015385: sodium:proton antiporter activity	1.73E-02
90	GO:0008375: acetylglucosaminyltransferase activity	2.22E-02
91	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.22E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	2.30E-02
93	GO:0030247: polysaccharide binding	2.30E-02
94	GO:0004721: phosphoprotein phosphatase activity	2.30E-02
95	GO:0061630: ubiquitin protein ligase activity	2.93E-02
96	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.93E-02
97	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.02E-02
98	GO:0042803: protein homodimerization activity	3.50E-02
99	GO:0015293: symporter activity	3.81E-02
100	GO:0005198: structural molecule activity	3.81E-02
101	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.91E-02
102	GO:0051287: NAD binding	4.02E-02
103	GO:0016298: lipase activity	4.44E-02
104	GO:0015171: amino acid transmembrane transporter activity	4.66E-02
105	GO:0045330: aspartyl esterase activity	4.66E-02
106	GO:0045735: nutrient reservoir activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.08E-13
2	GO:0016021: integral component of membrane	5.85E-07
3	GO:0045252: oxoglutarate dehydrogenase complex	1.60E-04
4	GO:0000124: SAGA complex	3.65E-04
5	GO:0016020: membrane	1.20E-03
6	GO:0008250: oligosaccharyltransferase complex	1.43E-03
7	GO:0005669: transcription factor TFIID complex	2.88E-03
8	GO:0030125: clathrin vesicle coat	4.64E-03
9	GO:0048471: perinuclear region of cytoplasm	5.12E-03
10	GO:0005795: Golgi stack	7.22E-03
11	GO:0043234: protein complex	7.79E-03
12	GO:0005802: trans-Golgi network	8.82E-03
13	GO:0009506: plasmodesma	1.03E-02
14	GO:0005737: cytoplasm	1.59E-02
15	GO:0071944: cell periphery	1.73E-02
16	GO:0032580: Golgi cisterna membrane	1.81E-02
17	GO:0019005: SCF ubiquitin ligase complex	2.47E-02
18	GO:0000786: nucleosome	2.84E-02
19	GO:0005774: vacuolar membrane	2.86E-02
20	GO:0005768: endosome	3.88E-02
21	GO:0010008: endosome membrane	4.99E-02