co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G25910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:0006983: ER overload response	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
7	GO:0006497: protein lipidation	0.00E+00
8	GO:0006182: cGMP biosynthetic process	0.00E+00
9	GO:0006592: ornithine biosynthetic process	0.00E+00
10	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
11	GO:0010055: atrichoblast differentiation	0.00E+00
12	GO:0043201: response to leucine	0.00E+00
13	GO:0043066: negative regulation of apoptotic process	4.99E-06
14	GO:0010150: leaf senescence	5.00E-06
15	GO:0042742: defense response to bacterium	7.81E-06
16	GO:0009620: response to fungus	9.00E-06
17	GO:0010120: camalexin biosynthetic process	1.46E-05
18	GO:0009817: defense response to fungus, incompatible interaction	1.24E-04
19	GO:0002238: response to molecule of fungal origin	1.58E-04
20	GO:0006952: defense response	1.81E-04
21	GO:0071456: cellular response to hypoxia	2.05E-04
22	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.15E-04
23	GO:1901183: positive regulation of camalexin biosynthetic process	3.32E-04
24	GO:0032491: detection of molecule of fungal origin	3.32E-04
25	GO:0042759: long-chain fatty acid biosynthetic process	3.32E-04
26	GO:0032107: regulation of response to nutrient levels	3.32E-04
27	GO:0051938: L-glutamate import	3.32E-04
28	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.32E-04
29	GO:0010941: regulation of cell death	3.32E-04
30	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.32E-04
31	GO:0030091: protein repair	3.52E-04
32	GO:0010204: defense response signaling pathway, resistance gene-independent	4.31E-04
33	GO:0009751: response to salicylic acid	5.40E-04
34	GO:0006468: protein phosphorylation	6.33E-04
35	GO:0043069: negative regulation of programmed cell death	7.14E-04
36	GO:0002240: response to molecule of oomycetes origin	7.24E-04
37	GO:0006423: cysteinyl-tRNA aminoacylation	7.24E-04
38	GO:0030003: cellular cation homeostasis	7.24E-04
39	GO:0019483: beta-alanine biosynthetic process	7.24E-04
40	GO:0042939: tripeptide transport	7.24E-04
41	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.24E-04
42	GO:0019441: tryptophan catabolic process to kynurenine	7.24E-04
43	GO:0043091: L-arginine import	7.24E-04
44	GO:0080183: response to photooxidative stress	7.24E-04
45	GO:0015802: basic amino acid transport	7.24E-04
46	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	7.24E-04
47	GO:0006212: uracil catabolic process	7.24E-04
48	GO:0009682: induced systemic resistance	8.23E-04
49	GO:0070475: rRNA base methylation	1.17E-03
50	GO:0010498: proteasomal protein catabolic process	1.17E-03
51	GO:1900055: regulation of leaf senescence	1.17E-03
52	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.17E-03
53	GO:0010200: response to chitin	1.21E-03
54	GO:0080147: root hair cell development	1.65E-03
55	GO:0009399: nitrogen fixation	1.68E-03
56	GO:0046513: ceramide biosynthetic process	1.68E-03
57	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.68E-03
58	GO:0048194: Golgi vesicle budding	1.68E-03
59	GO:0006874: cellular calcium ion homeostasis	1.82E-03
60	GO:0003333: amino acid transmembrane transport	2.00E-03
61	GO:0042938: dipeptide transport	2.26E-03
62	GO:0006542: glutamine biosynthetic process	2.26E-03
63	GO:0045227: capsule polysaccharide biosynthetic process	2.26E-03
64	GO:0006536: glutamate metabolic process	2.26E-03
65	GO:0033358: UDP-L-arabinose biosynthetic process	2.26E-03
66	GO:0006012: galactose metabolic process	2.38E-03
67	GO:0009617: response to bacterium	2.39E-03
68	GO:0009809: lignin biosynthetic process	2.85E-03
69	GO:0000304: response to singlet oxygen	2.89E-03
70	GO:0042631: cellular response to water deprivation	3.03E-03
71	GO:0050832: defense response to fungus	3.53E-03
72	GO:1900425: negative regulation of defense response to bacterium	3.57E-03
73	GO:0006561: proline biosynthetic process	3.57E-03
74	GO:0010942: positive regulation of cell death	3.57E-03
75	GO:0010256: endomembrane system organization	3.57E-03
76	GO:0010252: auxin homeostasis	4.88E-03
77	GO:0055114: oxidation-reduction process	4.88E-03
78	GO:0019745: pentacyclic triterpenoid biosynthetic process	5.07E-03
79	GO:1900057: positive regulation of leaf senescence	5.07E-03
80	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	5.07E-03
81	GO:1902074: response to salt	5.07E-03
82	GO:1900056: negative regulation of leaf senescence	5.07E-03
83	GO:0006904: vesicle docking involved in exocytosis	5.19E-03
84	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.89E-03
85	GO:0009642: response to light intensity	5.89E-03
86	GO:1900150: regulation of defense response to fungus	5.89E-03
87	GO:0009850: auxin metabolic process	5.89E-03
88	GO:0009627: systemic acquired resistance	6.51E-03
89	GO:0006526: arginine biosynthetic process	6.76E-03
90	GO:0043562: cellular response to nitrogen levels	6.76E-03
91	GO:0009808: lignin metabolic process	6.76E-03
92	GO:0008219: cell death	7.61E-03
93	GO:0009821: alkaloid biosynthetic process	7.67E-03
94	GO:0007338: single fertilization	7.67E-03
95	GO:0032259: methylation	8.37E-03
96	GO:0006499: N-terminal protein myristoylation	8.40E-03
97	GO:0009407: toxin catabolic process	8.40E-03
98	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.61E-03
99	GO:0008202: steroid metabolic process	8.61E-03
100	GO:0007568: aging	8.81E-03
101	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.61E-03
102	GO:0006032: chitin catabolic process	9.61E-03
103	GO:0009688: abscisic acid biosynthetic process	9.61E-03
104	GO:0045087: innate immune response	9.66E-03
105	GO:0009089: lysine biosynthetic process via diaminopimelate	1.06E-02
106	GO:0000272: polysaccharide catabolic process	1.06E-02
107	GO:0007166: cell surface receptor signaling pathway	1.06E-02
108	GO:0000038: very long-chain fatty acid metabolic process	1.06E-02
109	GO:0006816: calcium ion transport	1.06E-02
110	GO:0006887: exocytosis	1.15E-02
111	GO:0002213: defense response to insect	1.17E-02
112	GO:0071365: cellular response to auxin stimulus	1.17E-02
113	GO:0000266: mitochondrial fission	1.17E-02
114	GO:0006790: sulfur compound metabolic process	1.17E-02
115	GO:0012501: programmed cell death	1.17E-02
116	GO:0042542: response to hydrogen peroxide	1.20E-02
117	GO:0051707: response to other organism	1.25E-02
118	GO:0010102: lateral root morphogenesis	1.28E-02
119	GO:0006807: nitrogen compound metabolic process	1.28E-02
120	GO:0055046: microgametogenesis	1.28E-02
121	GO:0009718: anthocyanin-containing compound biosynthetic process	1.28E-02
122	GO:0002237: response to molecule of bacterial origin	1.40E-02
123	GO:0009636: response to toxic substance	1.40E-02
124	GO:0010143: cutin biosynthetic process	1.40E-02
125	GO:0006855: drug transmembrane transport	1.46E-02
126	GO:0070588: calcium ion transmembrane transport	1.51E-02
127	GO:0046854: phosphatidylinositol phosphorylation	1.51E-02
128	GO:0009969: xyloglucan biosynthetic process	1.51E-02
129	GO:0009225: nucleotide-sugar metabolic process	1.51E-02
130	GO:0042538: hyperosmotic salinity response	1.57E-02
131	GO:0010025: wax biosynthetic process	1.63E-02
132	GO:0009863: salicylic acid mediated signaling pathway	1.76E-02
133	GO:2000377: regulation of reactive oxygen species metabolic process	1.76E-02
134	GO:0005992: trehalose biosynthetic process	1.76E-02
135	GO:0009695: jasmonic acid biosynthetic process	1.89E-02
136	GO:0031408: oxylipin biosynthetic process	2.02E-02
137	GO:0016998: cell wall macromolecule catabolic process	2.02E-02
138	GO:0009611: response to wounding	2.19E-02
139	GO:0010227: floral organ abscission	2.29E-02
140	GO:0009561: megagametogenesis	2.43E-02
141	GO:0010584: pollen exine formation	2.43E-02
142	GO:0007165: signal transduction	2.84E-02
143	GO:0006885: regulation of pH	2.87E-02
144	GO:0048544: recognition of pollen	3.02E-02
145	GO:0042752: regulation of circadian rhythm	3.02E-02
146	GO:0009851: auxin biosynthetic process	3.18E-02
147	GO:0006623: protein targeting to vacuole	3.18E-02
148	GO:0002229: defense response to oomycetes	3.33E-02
149	GO:0010193: response to ozone	3.33E-02
150	GO:0010583: response to cyclopentenone	3.49E-02
151	GO:0006914: autophagy	3.82E-02
152	GO:0009567: double fertilization forming a zygote and endosperm	3.82E-02
153	GO:0016310: phosphorylation	3.83E-02
154	GO:0051607: defense response to virus	4.16E-02
155	GO:0009615: response to virus	4.33E-02
156	GO:0009607: response to biotic stimulus	4.51E-02
157	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.51E-02
158	GO:0042128: nitrate assimilation	4.68E-02
159	GO:0006888: ER to Golgi vesicle-mediated transport	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0003796: lysozyme activity	0.00E+00
3	GO:0008777: acetylornithine deacetylase activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
6	GO:0005548: phospholipid transporter activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0070577: lysine-acetylated histone binding	0.00E+00
9	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.21E-05
10	GO:0016301: kinase activity	2.35E-05
11	GO:0010279: indole-3-acetic acid amido synthetase activity	6.97E-05
12	GO:0050660: flavin adenine dinucleotide binding	2.10E-04
13	GO:0004012: phospholipid-translocating ATPase activity	2.15E-04
14	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.15E-04
15	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.32E-04
16	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.32E-04
17	GO:0004321: fatty-acyl-CoA synthase activity	3.32E-04
18	GO:0019707: protein-cysteine S-acyltransferase activity	3.32E-04
19	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.32E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.32E-04
21	GO:0005524: ATP binding	5.17E-04
22	GO:0009055: electron carrier activity	6.40E-04
23	GO:0008171: O-methyltransferase activity	7.14E-04
24	GO:0032934: sterol binding	7.24E-04
25	GO:0019779: Atg8 activating enzyme activity	7.24E-04
26	GO:0004061: arylformamidase activity	7.24E-04
27	GO:0042937: tripeptide transporter activity	7.24E-04
28	GO:0004103: choline kinase activity	7.24E-04
29	GO:0004566: beta-glucuronidase activity	7.24E-04
30	GO:0050291: sphingosine N-acyltransferase activity	7.24E-04
31	GO:0004817: cysteine-tRNA ligase activity	7.24E-04
32	GO:0004674: protein serine/threonine kinase activity	8.63E-04
33	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.86E-04
34	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.06E-03
35	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.17E-03
36	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.17E-03
37	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.17E-03
38	GO:0004383: guanylate cyclase activity	1.17E-03
39	GO:0016595: glutamate binding	1.17E-03
40	GO:0005217: intracellular ligand-gated ion channel activity	1.34E-03
41	GO:0004970: ionotropic glutamate receptor activity	1.34E-03
42	GO:0015181: arginine transmembrane transporter activity	1.68E-03
43	GO:0042299: lupeol synthase activity	1.68E-03
44	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.68E-03
45	GO:0004351: glutamate decarboxylase activity	1.68E-03
46	GO:0015189: L-lysine transmembrane transporter activity	1.68E-03
47	GO:0005313: L-glutamate transmembrane transporter activity	2.26E-03
48	GO:0070628: proteasome binding	2.26E-03
49	GO:0016866: intramolecular transferase activity	2.26E-03
50	GO:0004031: aldehyde oxidase activity	2.26E-03
51	GO:0050302: indole-3-acetaldehyde oxidase activity	2.26E-03
52	GO:0050373: UDP-arabinose 4-epimerase activity	2.26E-03
53	GO:0042936: dipeptide transporter activity	2.26E-03
54	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.26E-03
55	GO:0004356: glutamate-ammonia ligase activity	2.89E-03
56	GO:0045431: flavonol synthase activity	2.89E-03
57	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.30E-03
58	GO:0102391: decanoate--CoA ligase activity	4.30E-03
59	GO:0005261: cation channel activity	4.30E-03
60	GO:0003978: UDP-glucose 4-epimerase activity	4.30E-03
61	GO:0004602: glutathione peroxidase activity	4.30E-03
62	GO:0004656: procollagen-proline 4-dioxygenase activity	4.30E-03
63	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.30E-03
64	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.30E-03
65	GO:0005085: guanyl-nucleotide exchange factor activity	5.07E-03
66	GO:0004467: long-chain fatty acid-CoA ligase activity	5.07E-03
67	GO:0008237: metallopeptidase activity	5.19E-03
68	GO:0004033: aldo-keto reductase (NADP) activity	5.89E-03
69	GO:0052747: sinapyl alcohol dehydrogenase activity	5.89E-03
70	GO:0004034: aldose 1-epimerase activity	5.89E-03
71	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.76E-03
72	GO:0008173: RNA methyltransferase activity	6.76E-03
73	GO:0008142: oxysterol binding	6.76E-03
74	GO:0004630: phospholipase D activity	6.76E-03
75	GO:0030247: polysaccharide binding	6.87E-03
76	GO:0016207: 4-coumarate-CoA ligase activity	7.67E-03
77	GO:0015238: drug transmembrane transporter activity	8.00E-03
78	GO:0015174: basic amino acid transmembrane transporter activity	8.61E-03
79	GO:0030955: potassium ion binding	8.61E-03
80	GO:0016844: strictosidine synthase activity	8.61E-03
81	GO:0004743: pyruvate kinase activity	8.61E-03
82	GO:0004568: chitinase activity	9.61E-03
83	GO:0046872: metal ion binding	9.62E-03
84	GO:0008422: beta-glucosidase activity	1.06E-02
85	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.17E-02
86	GO:0004364: glutathione transferase activity	1.20E-02
87	GO:0004022: alcohol dehydrogenase (NAD) activity	1.28E-02
88	GO:0005262: calcium channel activity	1.28E-02
89	GO:0015114: phosphate ion transmembrane transporter activity	1.28E-02
90	GO:0005388: calcium-transporting ATPase activity	1.28E-02
91	GO:0051537: 2 iron, 2 sulfur cluster binding	1.35E-02
92	GO:0000287: magnesium ion binding	1.53E-02
93	GO:0001046: core promoter sequence-specific DNA binding	1.76E-02
94	GO:0031418: L-ascorbic acid binding	1.76E-02
95	GO:0003954: NADH dehydrogenase activity	1.76E-02
96	GO:0005509: calcium ion binding	1.83E-02
97	GO:0015171: amino acid transmembrane transporter activity	1.87E-02
98	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.02E-02
99	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.43E-02
100	GO:0015035: protein disulfide oxidoreductase activity	2.48E-02
101	GO:0005215: transporter activity	2.48E-02
102	GO:0005451: monovalent cation:proton antiporter activity	2.72E-02
103	GO:0005199: structural constituent of cell wall	2.87E-02
104	GO:0015299: solute:proton antiporter activity	3.02E-02
105	GO:0010181: FMN binding	3.02E-02
106	GO:0016853: isomerase activity	3.02E-02
107	GO:0030246: carbohydrate binding	3.28E-02
108	GO:0030170: pyridoxal phosphate binding	3.34E-02
109	GO:0015385: sodium:proton antiporter activity	3.66E-02
110	GO:0005516: calmodulin binding	3.86E-02
111	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.87E-02
112	GO:0015297: antiporter activity	3.96E-02
113	GO:0008483: transaminase activity	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	5.39E-07
2	GO:0005886: plasma membrane	7.36E-06
3	GO:0005829: cytosol	1.20E-04
4	GO:0045252: oxoglutarate dehydrogenase complex	3.32E-04
5	GO:0000138: Golgi trans cisterna	3.32E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	7.24E-04
7	GO:0009530: primary cell wall	1.17E-03
8	GO:0070062: extracellular exosome	1.68E-03
9	GO:0030126: COPI vesicle coat	2.89E-03
10	GO:0032588: trans-Golgi network membrane	3.57E-03
11	GO:0000145: exocyst	4.31E-03
12	GO:0005783: endoplasmic reticulum	5.92E-03
13	GO:0005765: lysosomal membrane	1.06E-02
14	GO:0005769: early endosome	1.63E-02
15	GO:0005839: proteasome core complex	2.02E-02
16	GO:0031410: cytoplasmic vesicle	2.15E-02
17	GO:0005770: late endosome	2.87E-02
18	GO:0032580: Golgi cisterna membrane	3.82E-02
19	GO:0005802: trans-Golgi network	4.22E-02
20	GO:0005789: endoplasmic reticulum membrane	4.24E-02
21	GO:0005615: extracellular space	4.63E-02