Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G24470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0010378: temperature compensation of the circadian clock0.00E+00
3GO:0009768: photosynthesis, light harvesting in photosystem I1.30E-18
4GO:0018298: protein-chromophore linkage1.78E-13
5GO:0009645: response to low light intensity stimulus6.81E-11
6GO:0015979: photosynthesis1.98E-09
7GO:0009644: response to high light intensity1.40E-08
8GO:0009769: photosynthesis, light harvesting in photosystem II3.27E-08
9GO:0010218: response to far red light3.18E-07
10GO:0009416: response to light stimulus1.89E-05
11GO:0009637: response to blue light2.30E-05
12GO:0010114: response to red light3.45E-05
13GO:0015812: gamma-aminobutyric acid transport3.77E-05
14GO:0032958: inositol phosphate biosynthetic process3.77E-05
15GO:0010017: red or far-red light signaling pathway1.14E-04
16GO:0006598: polyamine catabolic process1.63E-04
17GO:0009409: response to cold1.71E-04
18GO:0006020: inositol metabolic process2.40E-04
19GO:0044211: CTP salvage2.40E-04
20GO:0009765: photosynthesis, light harvesting3.24E-04
21GO:0010600: regulation of auxin biosynthetic process3.24E-04
22GO:0044206: UMP salvage3.24E-04
23GO:0030104: water homeostasis3.24E-04
24GO:0048578: positive regulation of long-day photoperiodism, flowering4.13E-04
25GO:0043097: pyrimidine nucleoside salvage4.13E-04
26GO:0006206: pyrimidine nucleobase metabolic process5.07E-04
27GO:0009635: response to herbicide5.07E-04
28GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.05E-04
29GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.05E-04
30GO:0042542: response to hydrogen peroxide6.50E-04
31GO:0010161: red light signaling pathway7.07E-04
32GO:0008643: carbohydrate transport7.29E-04
33GO:0010928: regulation of auxin mediated signaling pathway8.13E-04
34GO:0009704: de-etiolation8.13E-04
35GO:0009585: red, far-red light phototransduction8.97E-04
36GO:0010099: regulation of photomorphogenesis9.23E-04
37GO:0009827: plant-type cell wall modification9.23E-04
38GO:0090333: regulation of stomatal closure1.04E-03
39GO:0048354: mucilage biosynthetic process involved in seed coat development1.15E-03
40GO:0009641: shade avoidance1.28E-03
41GO:0055062: phosphate ion homeostasis1.28E-03
42GO:0009718: anthocyanin-containing compound biosynthetic process1.67E-03
43GO:0009266: response to temperature stimulus1.81E-03
44GO:0055085: transmembrane transport2.13E-03
45GO:0007623: circadian rhythm2.13E-03
46GO:0048511: rhythmic process2.56E-03
47GO:0009269: response to desiccation2.56E-03
48GO:0003333: amino acid transmembrane transport2.56E-03
49GO:0071215: cellular response to abscisic acid stimulus2.89E-03
50GO:0006814: sodium ion transport3.76E-03
51GO:0042752: regulation of circadian rhythm3.76E-03
52GO:0080167: response to karrikin4.05E-03
53GO:0000302: response to reactive oxygen species4.13E-03
54GO:1901657: glycosyl compound metabolic process4.51E-03
55GO:0015995: chlorophyll biosynthetic process5.94E-03
56GO:0009817: defense response to fungus, incompatible interaction6.38E-03
57GO:0000160: phosphorelay signal transduction system6.60E-03
58GO:0010119: regulation of stomatal movement7.05E-03
59GO:0009735: response to cytokinin9.66E-03
60GO:0006812: cation transport1.05E-02
61GO:0009611: response to wounding1.08E-02
62GO:0009909: regulation of flower development1.19E-02
63GO:0006457: protein folding1.37E-02
64GO:0009624: response to nematode1.42E-02
65GO:0009058: biosynthetic process1.73E-02
66GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.26E-02
67GO:0010468: regulation of gene expression2.37E-02
68GO:0009658: chloroplast organization2.85E-02
69GO:0005975: carbohydrate metabolic process3.26E-02
70GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.40E-02
71GO:0010200: response to chitin3.40E-02
72GO:0044550: secondary metabolite biosynthetic process3.53E-02
73GO:0045892: negative regulation of transcription, DNA-templated3.82E-02
74GO:0006355: regulation of transcription, DNA-templated4.18E-02
75GO:0006629: lipid metabolic process4.39E-02
76GO:0009408: response to heat4.39E-02
77GO:0007165: signal transduction4.46E-02
78GO:0009753: response to jasmonic acid4.61E-02
RankGO TermAdjusted P value
1GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
2GO:0047668: amygdalin beta-glucosidase activity0.00E+00
3GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
4GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
5GO:0004567: beta-mannosidase activity0.00E+00
6GO:0080082: esculin beta-glucosidase activity0.00E+00
7GO:0031409: pigment binding4.68E-19
8GO:0016168: chlorophyll binding4.19E-16
9GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.77E-05
10GO:0000829: inositol heptakisphosphate kinase activity3.77E-05
11GO:0080079: cellobiose glucosidase activity3.77E-05
12GO:0000828: inositol hexakisphosphate kinase activity3.77E-05
13GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.77E-05
14GO:0015180: L-alanine transmembrane transporter activity9.40E-05
15GO:0046592: polyamine oxidase activity1.63E-04
16GO:0015189: L-lysine transmembrane transporter activity2.40E-04
17GO:0015181: arginine transmembrane transporter activity2.40E-04
18GO:0046872: metal ion binding2.42E-04
19GO:0004845: uracil phosphoribosyltransferase activity3.24E-04
20GO:0005313: L-glutamate transmembrane transporter activity3.24E-04
21GO:0015562: efflux transmembrane transporter activity5.07E-04
22GO:0004849: uridine kinase activity6.05E-04
23GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.04E-03
24GO:0000989: transcription factor activity, transcription factor binding1.04E-03
25GO:0047372: acylglycerol lipase activity1.40E-03
26GO:0004565: beta-galactosidase activity1.67E-03
27GO:0004022: alcohol dehydrogenase (NAD) activity1.67E-03
28GO:0005315: inorganic phosphate transmembrane transporter activity1.67E-03
29GO:0008131: primary amine oxidase activity1.81E-03
30GO:0015297: antiporter activity2.04E-03
31GO:0005351: sugar:proton symporter activity2.08E-03
32GO:0008324: cation transmembrane transporter activity2.40E-03
33GO:0004707: MAP kinase activity2.56E-03
34GO:0008514: organic anion transmembrane transporter activity3.05E-03
35GO:0000156: phosphorelay response regulator activity4.51E-03
36GO:0102483: scopolin beta-glucosidase activity5.94E-03
37GO:0008422: beta-glucosidase activity7.99E-03
38GO:0015293: symporter activity9.73E-03
39GO:0005198: structural molecule activity9.73E-03
40GO:0008270: zinc ion binding1.02E-02
41GO:0015171: amino acid transmembrane transporter activity1.19E-02
42GO:0022857: transmembrane transporter activity1.36E-02
43GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.69E-02
44GO:0015144: carbohydrate transmembrane transporter activity1.89E-02
45GO:0004497: monooxygenase activity3.32E-02
46GO:0061630: ubiquitin protein ligase activity3.45E-02
47GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.99E-02
48GO:0016787: hydrolase activity4.58E-02
49GO:0004519: endonuclease activity4.66E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex1.34E-16
2GO:0009522: photosystem I8.17E-15
3GO:0010287: plastoglobule3.30E-13
4GO:0009579: thylakoid8.30E-11
5GO:0009523: photosystem II3.74E-10
6GO:0009534: chloroplast thylakoid2.78E-09
7GO:0009535: chloroplast thylakoid membrane3.07E-08
8GO:0009941: chloroplast envelope7.85E-06
9GO:0016021: integral component of membrane3.25E-05
10GO:0016020: membrane5.87E-05
11GO:0042651: thylakoid membrane9.26E-05
12GO:0009517: PSII associated light-harvesting complex II3.24E-04
13GO:0009507: chloroplast2.33E-03
14GO:0031966: mitochondrial membrane1.05E-02
15GO:0005777: peroxisome1.21E-02
16GO:0016607: nuclear speck1.27E-02
17GO:0005654: nucleoplasm1.63E-02
18GO:0005618: cell wall2.20E-02
19GO:0009505: plant-type cell wall2.69E-02
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Gene type



Gene DE type