co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G23850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0045792: negative regulation of cell size	0.00E+00
5	GO:0039694: viral RNA genome replication	0.00E+00
6	GO:0042430: indole-containing compound metabolic process	0.00E+00
7	GO:0002376: immune system process	0.00E+00
8	GO:0090069: regulation of ribosome biogenesis	0.00E+00
9	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
10	GO:0030149: sphingolipid catabolic process	0.00E+00
11	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
12	GO:0045454: cell redox homeostasis	1.34E-09
13	GO:0034976: response to endoplasmic reticulum stress	4.62E-08
14	GO:0042742: defense response to bacterium	2.55E-06
15	GO:0006468: protein phosphorylation	6.07E-06
16	GO:0045039: protein import into mitochondrial inner membrane	1.31E-05
17	GO:0048281: inflorescence morphogenesis	1.31E-05
18	GO:0046686: response to cadmium ion	1.87E-05
19	GO:0001676: long-chain fatty acid metabolic process	2.94E-05
20	GO:0009617: response to bacterium	4.38E-05
21	GO:0080142: regulation of salicylic acid biosynthetic process	5.29E-05
22	GO:0060548: negative regulation of cell death	5.29E-05
23	GO:0006457: protein folding	1.12E-04
24	GO:0010200: response to chitin	1.53E-04
25	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.67E-04
26	GO:0010150: leaf senescence	2.26E-04
27	GO:0010197: polar nucleus fusion	2.60E-04
28	GO:2000232: regulation of rRNA processing	2.82E-04
29	GO:0060862: negative regulation of floral organ abscission	2.82E-04
30	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.82E-04
31	GO:0006805: xenobiotic metabolic process	2.82E-04
32	GO:0010482: regulation of epidermal cell division	2.82E-04
33	GO:0007166: cell surface receptor signaling pathway	2.93E-04
34	GO:0000302: response to reactive oxygen species	3.46E-04
35	GO:0010193: response to ozone	3.46E-04
36	GO:0046685: response to arsenic-containing substance	4.10E-04
37	GO:0009553: embryo sac development	5.30E-04
38	GO:0009816: defense response to bacterium, incompatible interaction	6.00E-04
39	GO:0019752: carboxylic acid metabolic process	6.19E-04
40	GO:0031349: positive regulation of defense response	6.19E-04
41	GO:1902000: homogentisate catabolic process	6.19E-04
42	GO:0008535: respiratory chain complex IV assembly	6.19E-04
43	GO:0002221: pattern recognition receptor signaling pathway	6.19E-04
44	GO:0071395: cellular response to jasmonic acid stimulus	6.19E-04
45	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.19E-04
46	GO:0010155: regulation of proton transport	6.19E-04
47	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	6.19E-04
48	GO:0009407: toxin catabolic process	8.83E-04
49	GO:0002237: response to molecule of bacterial origin	9.50E-04
50	GO:1900140: regulation of seedling development	1.00E-03
51	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.00E-03
52	GO:0055074: calcium ion homeostasis	1.00E-03
53	GO:0071494: cellular response to UV-C	1.00E-03
54	GO:0010272: response to silver ion	1.00E-03
55	GO:0009072: aromatic amino acid family metabolic process	1.00E-03
56	GO:0070588: calcium ion transmembrane transport	1.06E-03
57	GO:0006886: intracellular protein transport	1.08E-03
58	GO:0006631: fatty acid metabolic process	1.30E-03
59	GO:0000027: ribosomal large subunit assembly	1.30E-03
60	GO:0009855: determination of bilateral symmetry	1.44E-03
61	GO:0048194: Golgi vesicle budding	1.44E-03
62	GO:0033617: mitochondrial respiratory chain complex IV assembly	1.44E-03
63	GO:0007276: gamete generation	1.44E-03
64	GO:0033014: tetrapyrrole biosynthetic process	1.44E-03
65	GO:0006952: defense response	1.49E-03
66	GO:0051567: histone H3-K9 methylation	1.92E-03
67	GO:0051205: protein insertion into membrane	1.92E-03
68	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.92E-03
69	GO:0010188: response to microbial phytotoxin	1.92E-03
70	GO:0046345: abscisic acid catabolic process	1.92E-03
71	GO:0000460: maturation of 5.8S rRNA	1.92E-03
72	GO:0042273: ribosomal large subunit biogenesis	1.92E-03
73	GO:0006621: protein retention in ER lumen	1.92E-03
74	GO:0006364: rRNA processing	2.10E-03
75	GO:0015031: protein transport	2.21E-03
76	GO:0046283: anthocyanin-containing compound metabolic process	2.46E-03
77	GO:0006564: L-serine biosynthetic process	2.46E-03
78	GO:0006461: protein complex assembly	2.46E-03
79	GO:0009697: salicylic acid biosynthetic process	2.46E-03
80	GO:0006662: glycerol ether metabolic process	2.58E-03
81	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.03E-03
82	GO:0000741: karyogamy	3.03E-03
83	GO:0009228: thiamine biosynthetic process	3.03E-03
84	GO:0010942: positive regulation of cell death	3.03E-03
85	GO:0010405: arabinogalactan protein metabolic process	3.03E-03
86	GO:0006751: glutathione catabolic process	3.03E-03
87	GO:0000470: maturation of LSU-rRNA	3.03E-03
88	GO:0016554: cytidine to uridine editing	3.03E-03
89	GO:0006891: intra-Golgi vesicle-mediated transport	3.18E-03
90	GO:0010555: response to mannitol	3.65E-03
91	GO:2000067: regulation of root morphogenesis	3.65E-03
92	GO:0009567: double fertilization forming a zygote and endosperm	3.85E-03
93	GO:0043090: amino acid import	4.30E-03
94	GO:0071446: cellular response to salicylic acid stimulus	4.30E-03
95	GO:1900056: negative regulation of leaf senescence	4.30E-03
96	GO:0080186: developmental vegetative growth	4.30E-03
97	GO:0009615: response to virus	4.59E-03
98	GO:0031540: regulation of anthocyanin biosynthetic process	4.99E-03
99	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.99E-03
100	GO:0009819: drought recovery	4.99E-03
101	GO:0009627: systemic acquired resistance	5.12E-03
102	GO:0009790: embryo development	5.33E-03
103	GO:0010204: defense response signaling pathway, resistance gene-independent	5.72E-03
104	GO:0030968: endoplasmic reticulum unfolded protein response	5.72E-03
105	GO:0043562: cellular response to nitrogen levels	5.72E-03
106	GO:0007186: G-protein coupled receptor signaling pathway	5.72E-03
107	GO:0006783: heme biosynthetic process	6.48E-03
108	GO:0010112: regulation of systemic acquired resistance	6.48E-03
109	GO:0007338: single fertilization	6.48E-03
110	GO:0009051: pentose-phosphate shunt, oxidative branch	6.48E-03
111	GO:0010043: response to zinc ion	6.92E-03
112	GO:0010205: photoinhibition	7.28E-03
113	GO:0043067: regulation of programmed cell death	7.28E-03
114	GO:0048354: mucilage biosynthetic process involved in seed coat development	7.28E-03
115	GO:0009409: response to cold	7.85E-03
116	GO:0034599: cellular response to oxidative stress	7.94E-03
117	GO:0000103: sulfate assimilation	8.11E-03
118	GO:0006032: chitin catabolic process	8.11E-03
119	GO:0010162: seed dormancy process	8.11E-03
120	GO:0000272: polysaccharide catabolic process	8.97E-03
121	GO:0009750: response to fructose	8.97E-03
122	GO:0048765: root hair cell differentiation	8.97E-03
123	GO:0072593: reactive oxygen species metabolic process	8.97E-03
124	GO:0042542: response to hydrogen peroxide	9.41E-03
125	GO:0071365: cellular response to auxin stimulus	9.88E-03
126	GO:0015706: nitrate transport	9.88E-03
127	GO:0006626: protein targeting to mitochondrion	1.08E-02
128	GO:0006006: glucose metabolic process	1.08E-02
129	GO:0010075: regulation of meristem growth	1.08E-02
130	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.08E-02
131	GO:0009636: response to toxic substance	1.10E-02
132	GO:0007034: vacuolar transport	1.18E-02
133	GO:0009934: regulation of meristem structural organization	1.18E-02
134	GO:0010143: cutin biosynthetic process	1.18E-02
135	GO:0031347: regulation of defense response	1.19E-02
136	GO:0010053: root epidermal cell differentiation	1.28E-02
137	GO:0042343: indole glucosinolate metabolic process	1.28E-02
138	GO:0010167: response to nitrate	1.28E-02
139	GO:0046688: response to copper ion	1.28E-02
140	GO:0010025: wax biosynthetic process	1.38E-02
141	GO:0006979: response to oxidative stress	1.40E-02
142	GO:0030150: protein import into mitochondrial matrix	1.48E-02
143	GO:2000377: regulation of reactive oxygen species metabolic process	1.48E-02
144	GO:0006487: protein N-linked glycosylation	1.48E-02
145	GO:0009944: polarity specification of adaxial/abaxial axis	1.48E-02
146	GO:0009863: salicylic acid mediated signaling pathway	1.48E-02
147	GO:0006825: copper ion transport	1.59E-02
148	GO:0051302: regulation of cell division	1.59E-02
149	GO:0010026: trichome differentiation	1.59E-02
150	GO:0016998: cell wall macromolecule catabolic process	1.70E-02
151	GO:0098542: defense response to other organism	1.70E-02
152	GO:0009651: response to salt stress	1.78E-02
153	GO:0030433: ubiquitin-dependent ERAD pathway	1.81E-02
154	GO:0031348: negative regulation of defense response	1.81E-02
155	GO:0071456: cellular response to hypoxia	1.81E-02
156	GO:0009814: defense response, incompatible interaction	1.81E-02
157	GO:0009294: DNA mediated transformation	1.93E-02
158	GO:0009625: response to insect	1.93E-02
159	GO:0009306: protein secretion	2.05E-02
160	GO:0010091: trichome branching	2.05E-02
161	GO:0042147: retrograde transport, endosome to Golgi	2.17E-02
162	GO:0010501: RNA secondary structure unwinding	2.29E-02
163	GO:0042631: cellular response to water deprivation	2.29E-02
164	GO:0048868: pollen tube development	2.42E-02
165	GO:0009960: endosperm development	2.42E-02
166	GO:0006520: cellular amino acid metabolic process	2.42E-02
167	GO:0009751: response to salicylic acid	2.43E-02
168	GO:0009646: response to absence of light	2.54E-02
169	GO:0009749: response to glucose	2.67E-02
170	GO:0006623: protein targeting to vacuole	2.67E-02
171	GO:0080156: mitochondrial mRNA modification	2.81E-02
172	GO:0031047: gene silencing by RNA	2.94E-02
173	GO:0030163: protein catabolic process	3.08E-02
174	GO:0006464: cellular protein modification process	3.22E-02
175	GO:0042128: nitrate assimilation	3.95E-02
176	GO:0006974: cellular response to DNA damage stimulus	3.95E-02
177	GO:0015995: chlorophyll biosynthetic process	4.10E-02
178	GO:0008219: cell death	4.41E-02
179	GO:0009735: response to cytokinin	4.50E-02
180	GO:0006499: N-terminal protein myristoylation	4.72E-02
181	GO:0055114: oxidation-reduction process	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
4	GO:0004164: diphthine synthase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0005524: ATP binding	1.76E-08
7	GO:0102391: decanoate--CoA ligase activity	2.76E-06
8	GO:0043021: ribonucleoprotein complex binding	3.65E-06
9	GO:0004467: long-chain fatty acid-CoA ligase activity	4.46E-06
10	GO:0003756: protein disulfide isomerase activity	9.02E-06
11	GO:0000166: nucleotide binding	5.11E-05
12	GO:0015035: protein disulfide oxidoreductase activity	7.74E-05
13	GO:0050897: cobalt ion binding	1.05E-04
14	GO:0003746: translation elongation factor activity	1.24E-04
15	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.97E-04
16	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.76E-04
17	GO:0004325: ferrochelatase activity	2.82E-04
18	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.82E-04
19	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.82E-04
20	GO:0004672: protein kinase activity	2.94E-04
21	GO:0004713: protein tyrosine kinase activity	5.67E-04
22	GO:0019172: glyoxalase III activity	6.19E-04
23	GO:0035241: protein-arginine omega-N monomethyltransferase activity	6.19E-04
24	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	6.19E-04
25	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	6.19E-04
26	GO:0004617: phosphoglycerate dehydrogenase activity	6.19E-04
27	GO:0005516: calmodulin binding	6.84E-04
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.46E-04
29	GO:0005388: calcium-transporting ATPase activity	8.46E-04
30	GO:0004148: dihydrolipoyl dehydrogenase activity	1.00E-03
31	GO:0003840: gamma-glutamyltransferase activity	1.00E-03
32	GO:0036374: glutathione hydrolase activity	1.00E-03
33	GO:0004557: alpha-galactosidase activity	1.00E-03
34	GO:0031683: G-protein beta/gamma-subunit complex binding	1.00E-03
35	GO:0052692: raffinose alpha-galactosidase activity	1.00E-03
36	GO:0001664: G-protein coupled receptor binding	1.00E-03
37	GO:0008469: histone-arginine N-methyltransferase activity	1.00E-03
38	GO:0016531: copper chaperone activity	1.00E-03
39	GO:0008565: protein transporter activity	1.02E-03
40	GO:0004364: glutathione transferase activity	1.37E-03
41	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.44E-03
42	GO:0033612: receptor serine/threonine kinase binding	1.58E-03
43	GO:0016301: kinase activity	1.77E-03
44	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.92E-03
45	GO:0046923: ER retention sequence binding	1.92E-03
46	GO:0047134: protein-disulfide reductase activity	2.21E-03
47	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.46E-03
48	GO:0031386: protein tag	2.46E-03
49	GO:0004674: protein serine/threonine kinase activity	2.71E-03
50	GO:0004791: thioredoxin-disulfide reductase activity	2.77E-03
51	GO:0030976: thiamine pyrophosphate binding	3.03E-03
52	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.03E-03
53	GO:0031593: polyubiquitin binding	3.03E-03
54	GO:0051082: unfolded protein binding	3.29E-03
55	GO:0005515: protein binding	3.61E-03
56	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.62E-03
57	GO:0004012: phospholipid-translocating ATPase activity	3.65E-03
58	GO:0004602: glutathione peroxidase activity	3.65E-03
59	GO:0004656: procollagen-proline 4-dioxygenase activity	3.65E-03
60	GO:0005509: calcium ion binding	3.70E-03
61	GO:0008320: protein transmembrane transporter activity	4.30E-03
62	GO:0043295: glutathione binding	4.30E-03
63	GO:0030515: snoRNA binding	4.30E-03
64	GO:0016831: carboxy-lyase activity	4.30E-03
65	GO:0004683: calmodulin-dependent protein kinase activity	5.40E-03
66	GO:0008135: translation factor activity, RNA binding	5.72E-03
67	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.98E-03
68	GO:0015112: nitrate transmembrane transporter activity	7.28E-03
69	GO:0004568: chitinase activity	8.11E-03
70	GO:0004712: protein serine/threonine/tyrosine kinase activity	8.29E-03
71	GO:0008794: arsenate reductase (glutaredoxin) activity	8.97E-03
72	GO:0001054: RNA polymerase I activity	8.97E-03
73	GO:0005525: GTP binding	9.67E-03
74	GO:0008378: galactosyltransferase activity	9.88E-03
75	GO:0031072: heat shock protein binding	1.08E-02
76	GO:0005262: calcium channel activity	1.08E-02
77	GO:0008168: methyltransferase activity	1.10E-02
78	GO:0031624: ubiquitin conjugating enzyme binding	1.18E-02
79	GO:0004190: aspartic-type endopeptidase activity	1.28E-02
80	GO:0008061: chitin binding	1.28E-02
81	GO:0003712: transcription cofactor activity	1.28E-02
82	GO:0031418: L-ascorbic acid binding	1.48E-02
83	GO:0003954: NADH dehydrogenase activity	1.48E-02
84	GO:0004407: histone deacetylase activity	1.48E-02
85	GO:0005528: FK506 binding	1.48E-02
86	GO:0004298: threonine-type endopeptidase activity	1.70E-02
87	GO:0008026: ATP-dependent helicase activity	2.00E-02
88	GO:0004871: signal transducer activity	2.02E-02
89	GO:0004386: helicase activity	2.06E-02
90	GO:0016758: transferase activity, transferring hexosyl groups	2.30E-02
91	GO:0004527: exonuclease activity	2.42E-02
92	GO:0003713: transcription coactivator activity	2.42E-02
93	GO:0003924: GTPase activity	2.48E-02
94	GO:0005507: copper ion binding	2.50E-02
95	GO:0016853: isomerase activity	2.54E-02
96	GO:0004872: receptor activity	2.67E-02
97	GO:0009055: electron carrier activity	2.70E-02
98	GO:0016597: amino acid binding	3.50E-02
99	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.95E-02
100	GO:0004721: phosphoprotein phosphatase activity	4.10E-02
101	GO:0004004: ATP-dependent RNA helicase activity	4.10E-02
102	GO:0004222: metalloendopeptidase activity	4.72E-02
103	GO:0000287: magnesium ion binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0034455: t-UTP complex	0.00E+00
4	GO:0019034: viral replication complex	0.00E+00
5	GO:0070545: PeBoW complex	0.00E+00
6	GO:0005783: endoplasmic reticulum	8.82E-11
7	GO:0005886: plasma membrane	7.33E-09
8	GO:0005788: endoplasmic reticulum lumen	8.53E-08
9	GO:0005730: nucleolus	2.64E-05
10	GO:0005834: heterotrimeric G-protein complex	5.53E-05
11	GO:0005789: endoplasmic reticulum membrane	8.41E-05
12	GO:0005774: vacuolar membrane	1.11E-04
13	GO:0005801: cis-Golgi network	1.67E-04
14	GO:0030687: preribosome, large subunit precursor	2.19E-04
15	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	6.04E-04
16	GO:0030134: ER to Golgi transport vesicle	6.19E-04
17	GO:0031304: intrinsic component of mitochondrial inner membrane	6.19E-04
18	GO:0030139: endocytic vesicle	1.00E-03
19	GO:0046861: glyoxysomal membrane	1.00E-03
20	GO:0005829: cytosol	1.03E-03
21	GO:0005795: Golgi stack	1.06E-03
22	GO:0048046: apoplast	1.17E-03
23	GO:0005758: mitochondrial intermembrane space	1.30E-03
24	GO:0008250: oligosaccharyltransferase complex	2.46E-03
25	GO:0030904: retromer complex	3.03E-03
26	GO:0031428: box C/D snoRNP complex	3.03E-03
27	GO:0005773: vacuole	3.33E-03
28	GO:0009506: plasmodesma	3.84E-03
29	GO:0005743: mitochondrial inner membrane	5.55E-03
30	GO:0000326: protein storage vacuole	5.72E-03
31	GO:0009514: glyoxysome	5.72E-03
32	GO:0019773: proteasome core complex, alpha-subunit complex	5.72E-03
33	GO:0005736: DNA-directed RNA polymerase I complex	6.48E-03
34	GO:0009505: plant-type cell wall	6.75E-03
35	GO:0017119: Golgi transport complex	8.11E-03
36	GO:0031902: late endosome membrane	9.03E-03
37	GO:0032040: small-subunit processome	9.88E-03
38	GO:0031012: extracellular matrix	1.08E-02
39	GO:0005622: intracellular	1.11E-02
40	GO:0043234: protein complex	1.38E-02
41	GO:0005839: proteasome core complex	1.70E-02
42	GO:0005794: Golgi apparatus	2.03E-02
43	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.05E-02
44	GO:0005654: nucleoplasm	2.30E-02
45	GO:0005623: cell	2.43E-02
46	GO:0005618: cell wall	2.51E-02
47	GO:0016592: mediator complex	2.94E-02
48	GO:0005759: mitochondrial matrix	2.97E-02
49	GO:0009507: chloroplast	3.27E-02
50	GO:0005887: integral component of plasma membrane	3.62E-02
51	GO:0030529: intracellular ribonucleoprotein complex	3.65E-02
52	GO:0000932: P-body	3.65E-02
53	GO:0016021: integral component of membrane	4.11E-02
54	GO:0019005: SCF ubiquitin ligase complex	4.41E-02
55	GO:0000151: ubiquitin ligase complex	4.41E-02