GO Enrichment Analysis of Co-expressed Genes with
AT5G23510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 2 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 3 | GO:1901969: positive regulation of polynucleotide 3'-phosphatase activity | 0.00E+00 |
| 4 | GO:0006266: DNA ligation | 0.00E+00 |
| 5 | GO:1901972: positive regulation of DNA-5-methylcytosine glycosylase activity | 0.00E+00 |
| 6 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 7 | GO:0048194: Golgi vesicle budding | 7.65E-06 |
| 8 | GO:0042742: defense response to bacterium | 9.86E-05 |
| 9 | GO:0098721: uracil import across plasma membrane | 1.31E-04 |
| 10 | GO:0010266: response to vitamin B1 | 1.31E-04 |
| 11 | GO:0098702: adenine import across plasma membrane | 1.31E-04 |
| 12 | GO:0098710: guanine import across plasma membrane | 1.31E-04 |
| 13 | GO:0051245: negative regulation of cellular defense response | 1.31E-04 |
| 14 | GO:0006481: C-terminal protein methylation | 1.31E-04 |
| 15 | GO:0010941: regulation of cell death | 1.31E-04 |
| 16 | GO:0035344: hypoxanthine transport | 1.31E-04 |
| 17 | GO:0006643: membrane lipid metabolic process | 1.31E-04 |
| 18 | GO:0009627: systemic acquired resistance | 1.54E-04 |
| 19 | GO:0043069: negative regulation of programmed cell death | 1.92E-04 |
| 20 | GO:0006807: nitrogen compound metabolic process | 2.95E-04 |
| 21 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.03E-04 |
| 22 | GO:2000693: positive regulation of seed maturation | 3.03E-04 |
| 23 | GO:0002215: defense response to nematode | 3.03E-04 |
| 24 | GO:0006212: uracil catabolic process | 3.03E-04 |
| 25 | GO:0043066: negative regulation of apoptotic process | 3.03E-04 |
| 26 | GO:0019483: beta-alanine biosynthetic process | 3.03E-04 |
| 27 | GO:0009617: response to bacterium | 3.17E-04 |
| 28 | GO:0000162: tryptophan biosynthetic process | 4.19E-04 |
| 29 | GO:0006012: galactose metabolic process | 6.66E-04 |
| 30 | GO:0002239: response to oomycetes | 7.14E-04 |
| 31 | GO:0009399: nitrogen fixation | 7.14E-04 |
| 32 | GO:0006612: protein targeting to membrane | 7.14E-04 |
| 33 | GO:0006886: intracellular protein transport | 9.11E-04 |
| 34 | GO:0006542: glutamine biosynthetic process | 9.47E-04 |
| 35 | GO:0010222: stem vascular tissue pattern formation | 9.47E-04 |
| 36 | GO:0006085: acetyl-CoA biosynthetic process | 9.47E-04 |
| 37 | GO:1902584: positive regulation of response to water deprivation | 9.47E-04 |
| 38 | GO:0010363: regulation of plant-type hypersensitive response | 9.47E-04 |
| 39 | GO:0010107: potassium ion import | 9.47E-04 |
| 40 | GO:0061025: membrane fusion | 9.69E-04 |
| 41 | GO:0046686: response to cadmium ion | 1.19E-03 |
| 42 | GO:0018344: protein geranylgeranylation | 1.20E-03 |
| 43 | GO:0009697: salicylic acid biosynthetic process | 1.20E-03 |
| 44 | GO:0006090: pyruvate metabolic process | 1.20E-03 |
| 45 | GO:0030163: protein catabolic process | 1.25E-03 |
| 46 | GO:0006468: protein phosphorylation | 1.28E-03 |
| 47 | GO:0000911: cytokinesis by cell plate formation | 1.76E-03 |
| 48 | GO:0042372: phylloquinone biosynthetic process | 1.76E-03 |
| 49 | GO:0009612: response to mechanical stimulus | 1.76E-03 |
| 50 | GO:0010044: response to aluminum ion | 2.06E-03 |
| 51 | GO:0046470: phosphatidylcholine metabolic process | 2.06E-03 |
| 52 | GO:0080111: DNA demethylation | 2.06E-03 |
| 53 | GO:0009813: flavonoid biosynthetic process | 2.15E-03 |
| 54 | GO:0006875: cellular metal ion homeostasis | 2.39E-03 |
| 55 | GO:0009867: jasmonic acid mediated signaling pathway | 2.59E-03 |
| 56 | GO:0043562: cellular response to nitrogen levels | 2.73E-03 |
| 57 | GO:0009808: lignin metabolic process | 2.73E-03 |
| 58 | GO:0006303: double-strand break repair via nonhomologous end joining | 2.73E-03 |
| 59 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.08E-03 |
| 60 | GO:0034765: regulation of ion transmembrane transport | 3.08E-03 |
| 61 | GO:0090333: regulation of stomatal closure | 3.08E-03 |
| 62 | GO:0051707: response to other organism | 3.32E-03 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.97E-03 |
| 64 | GO:0046777: protein autophosphorylation | 4.15E-03 |
| 65 | GO:0030148: sphingolipid biosynthetic process | 4.24E-03 |
| 66 | GO:0052544: defense response by callose deposition in cell wall | 4.24E-03 |
| 67 | GO:0006813: potassium ion transport | 4.47E-03 |
| 68 | GO:0006508: proteolysis | 4.56E-03 |
| 69 | GO:0071365: cellular response to auxin stimulus | 4.65E-03 |
| 70 | GO:0000266: mitochondrial fission | 4.65E-03 |
| 71 | GO:0006108: malate metabolic process | 5.08E-03 |
| 72 | GO:2000028: regulation of photoperiodism, flowering | 5.08E-03 |
| 73 | GO:0048367: shoot system development | 5.45E-03 |
| 74 | GO:0009969: xyloglucan biosynthetic process | 5.97E-03 |
| 75 | GO:0080188: RNA-directed DNA methylation | 5.97E-03 |
| 76 | GO:0018105: peptidyl-serine phosphorylation | 6.54E-03 |
| 77 | GO:0009863: salicylic acid mediated signaling pathway | 6.91E-03 |
| 78 | GO:0080147: root hair cell development | 6.91E-03 |
| 79 | GO:0051260: protein homooligomerization | 7.91E-03 |
| 80 | GO:0048278: vesicle docking | 7.91E-03 |
| 81 | GO:0031408: oxylipin biosynthetic process | 7.91E-03 |
| 82 | GO:0031348: negative regulation of defense response | 8.42E-03 |
| 83 | GO:0071456: cellular response to hypoxia | 8.42E-03 |
| 84 | GO:0035428: hexose transmembrane transport | 8.42E-03 |
| 85 | GO:0071215: cellular response to abscisic acid stimulus | 8.95E-03 |
| 86 | GO:0010584: pollen exine formation | 9.49E-03 |
| 87 | GO:0016310: phosphorylation | 9.88E-03 |
| 88 | GO:0010118: stomatal movement | 1.06E-02 |
| 89 | GO:0042391: regulation of membrane potential | 1.06E-02 |
| 90 | GO:0010150: leaf senescence | 1.10E-02 |
| 91 | GO:0046323: glucose import | 1.12E-02 |
| 92 | GO:0006885: regulation of pH | 1.12E-02 |
| 93 | GO:0006520: cellular amino acid metabolic process | 1.12E-02 |
| 94 | GO:0009646: response to absence of light | 1.18E-02 |
| 95 | GO:0009851: auxin biosynthetic process | 1.24E-02 |
| 96 | GO:0002229: defense response to oomycetes | 1.30E-02 |
| 97 | GO:0009630: gravitropism | 1.36E-02 |
| 98 | GO:0007264: small GTPase mediated signal transduction | 1.36E-02 |
| 99 | GO:0016032: viral process | 1.36E-02 |
| 100 | GO:0050832: defense response to fungus | 1.37E-02 |
| 101 | GO:0051607: defense response to virus | 1.62E-02 |
| 102 | GO:0001666: response to hypoxia | 1.68E-02 |
| 103 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.75E-02 |
| 104 | GO:0009816: defense response to bacterium, incompatible interaction | 1.75E-02 |
| 105 | GO:0042128: nitrate assimilation | 1.82E-02 |
| 106 | GO:0006906: vesicle fusion | 1.82E-02 |
| 107 | GO:0006950: response to stress | 1.89E-02 |
| 108 | GO:0008219: cell death | 2.03E-02 |
| 109 | GO:0009817: defense response to fungus, incompatible interaction | 2.03E-02 |
| 110 | GO:0048767: root hair elongation | 2.11E-02 |
| 111 | GO:0016192: vesicle-mediated transport | 2.23E-02 |
| 112 | GO:0045087: innate immune response | 2.41E-02 |
| 113 | GO:0006099: tricarboxylic acid cycle | 2.48E-02 |
| 114 | GO:0007165: signal transduction | 2.48E-02 |
| 115 | GO:0006887: exocytosis | 2.72E-02 |
| 116 | GO:0006897: endocytosis | 2.72E-02 |
| 117 | GO:0016042: lipid catabolic process | 3.04E-02 |
| 118 | GO:0006979: response to oxidative stress | 3.17E-02 |
| 119 | GO:0031347: regulation of defense response | 3.30E-02 |
| 120 | GO:0006812: cation transport | 3.39E-02 |
| 121 | GO:0009846: pollen germination | 3.39E-02 |
| 122 | GO:0055114: oxidation-reduction process | 3.89E-02 |
| 123 | GO:0006952: defense response | 3.93E-02 |
| 124 | GO:0009626: plant-type hypersensitive response | 4.20E-02 |
| 125 | GO:0009620: response to fungus | 4.29E-02 |
| 126 | GO:0016569: covalent chromatin modification | 4.39E-02 |
| 127 | GO:0042545: cell wall modification | 4.48E-02 |
| 128 | GO:0009742: brassinosteroid mediated signaling pathway | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 2 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 3 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 4 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 5 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 9.97E-08 |
| 6 | GO:0004012: phospholipid-translocating ATPase activity | 4.03E-07 |
| 7 | GO:0004834: tryptophan synthase activity | 1.44E-05 |
| 8 | GO:0004034: aldose 1-epimerase activity | 8.68E-05 |
| 9 | GO:0008909: isochorismate synthase activity | 1.31E-04 |
| 10 | GO:0015207: adenine transmembrane transporter activity | 1.31E-04 |
| 11 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.31E-04 |
| 12 | GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | 1.31E-04 |
| 13 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.31E-04 |
| 14 | GO:0015208: guanine transmembrane transporter activity | 1.31E-04 |
| 15 | GO:0015294: solute:cation symporter activity | 1.31E-04 |
| 16 | GO:0005524: ATP binding | 2.04E-04 |
| 17 | GO:0004353: glutamate dehydrogenase [NAD(P)+] activity | 3.03E-04 |
| 18 | GO:0004566: beta-glucuronidase activity | 3.03E-04 |
| 19 | GO:0004352: glutamate dehydrogenase (NAD+) activity | 3.03E-04 |
| 20 | GO:0045140: inositol phosphoceramide synthase activity | 3.03E-04 |
| 21 | GO:0004190: aspartic-type endopeptidase activity | 3.75E-04 |
| 22 | GO:0000287: magnesium ion binding | 4.64E-04 |
| 23 | GO:0004383: guanylate cyclase activity | 4.99E-04 |
| 24 | GO:0016595: glutamate binding | 4.99E-04 |
| 25 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 4.99E-04 |
| 26 | GO:0005093: Rab GDP-dissociation inhibitor activity | 4.99E-04 |
| 27 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.99E-04 |
| 28 | GO:0003878: ATP citrate synthase activity | 7.14E-04 |
| 29 | GO:0001653: peptide receptor activity | 7.14E-04 |
| 30 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 7.14E-04 |
| 31 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 9.47E-04 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.47E-04 |
| 33 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 9.47E-04 |
| 34 | GO:0015210: uracil transmembrane transporter activity | 9.47E-04 |
| 35 | GO:0010385: double-stranded methylated DNA binding | 9.47E-04 |
| 36 | GO:0004470: malic enzyme activity | 9.47E-04 |
| 37 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.20E-03 |
| 38 | GO:0004356: glutamate-ammonia ligase activity | 1.20E-03 |
| 39 | GO:0045431: flavonol synthase activity | 1.20E-03 |
| 40 | GO:0008948: oxaloacetate decarboxylase activity | 1.20E-03 |
| 41 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 1.20E-03 |
| 42 | GO:0017137: Rab GTPase binding | 1.20E-03 |
| 43 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.76E-03 |
| 44 | GO:0005242: inward rectifier potassium channel activity | 1.76E-03 |
| 45 | GO:0004683: calmodulin-dependent protein kinase activity | 1.85E-03 |
| 46 | GO:0004620: phospholipase activity | 2.06E-03 |
| 47 | GO:0004033: aldo-keto reductase (NADP) activity | 2.39E-03 |
| 48 | GO:0004630: phospholipase D activity | 2.73E-03 |
| 49 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 2.73E-03 |
| 50 | GO:0005484: SNAP receptor activity | 3.32E-03 |
| 51 | GO:0016491: oxidoreductase activity | 3.34E-03 |
| 52 | GO:0016301: kinase activity | 3.71E-03 |
| 53 | GO:0004713: protein tyrosine kinase activity | 3.84E-03 |
| 54 | GO:0004674: protein serine/threonine kinase activity | 3.85E-03 |
| 55 | GO:0047372: acylglycerol lipase activity | 4.24E-03 |
| 56 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.08E-03 |
| 57 | GO:0005516: calmodulin binding | 5.27E-03 |
| 58 | GO:0045735: nutrient reservoir activity | 5.28E-03 |
| 59 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.52E-03 |
| 60 | GO:0005509: calcium ion binding | 7.31E-03 |
| 61 | GO:0005451: monovalent cation:proton antiporter activity | 1.06E-02 |
| 62 | GO:0030551: cyclic nucleotide binding | 1.06E-02 |
| 63 | GO:0003713: transcription coactivator activity | 1.12E-02 |
| 64 | GO:0030276: clathrin binding | 1.12E-02 |
| 65 | GO:0016853: isomerase activity | 1.18E-02 |
| 66 | GO:0015299: solute:proton antiporter activity | 1.18E-02 |
| 67 | GO:0010181: FMN binding | 1.18E-02 |
| 68 | GO:0005355: glucose transmembrane transporter activity | 1.18E-02 |
| 69 | GO:0015385: sodium:proton antiporter activity | 1.42E-02 |
| 70 | GO:0004672: protein kinase activity | 1.48E-02 |
| 71 | GO:0030246: carbohydrate binding | 1.88E-02 |
| 72 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.96E-02 |
| 73 | GO:0005096: GTPase activator activity | 2.11E-02 |
| 74 | GO:0050897: cobalt ion binding | 2.25E-02 |
| 75 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.41E-02 |
| 76 | GO:0000149: SNARE binding | 2.56E-02 |
| 77 | GO:0008422: beta-glucosidase activity | 2.56E-02 |
| 78 | GO:0005198: structural molecule activity | 3.13E-02 |
| 79 | GO:0051287: NAD binding | 3.30E-02 |
| 80 | GO:0016298: lipase activity | 3.65E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 3.83E-02 |
| 82 | GO:0008234: cysteine-type peptidase activity | 3.83E-02 |
| 83 | GO:0030599: pectinesterase activity | 4.39E-02 |
| 84 | GO:0022857: transmembrane transporter activity | 4.39E-02 |
| 85 | GO:0016746: transferase activity, transferring acyl groups | 4.67E-02 |
| 86 | GO:0004386: helicase activity | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 6.08E-07 |
| 2 | GO:0016021: integral component of membrane | 5.15E-05 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 1.31E-04 |
| 4 | GO:0005802: trans-Golgi network | 3.06E-04 |
| 5 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 7.14E-04 |
| 6 | GO:0009346: citrate lyase complex | 7.14E-04 |
| 7 | GO:0030131: clathrin adaptor complex | 2.39E-03 |
| 8 | GO:0005618: cell wall | 2.40E-03 |
| 9 | GO:0030125: clathrin vesicle coat | 3.84E-03 |
| 10 | GO:0048471: perinuclear region of cytoplasm | 4.24E-03 |
| 11 | GO:0005765: lysosomal membrane | 4.24E-03 |
| 12 | GO:0009506: plasmodesma | 5.06E-03 |
| 13 | GO:0005768: endosome | 7.04E-03 |
| 14 | GO:0005905: clathrin-coated pit | 7.91E-03 |
| 15 | GO:0016020: membrane | 9.00E-03 |
| 16 | GO:0009505: plant-type cell wall | 1.16E-02 |
| 17 | GO:0009504: cell plate | 1.24E-02 |
| 18 | GO:0071944: cell periphery | 1.42E-02 |
| 19 | GO:0048046: apoplast | 1.94E-02 |
| 20 | GO:0005829: cytosol | 2.47E-02 |
| 21 | GO:0031201: SNARE complex | 2.72E-02 |
| 22 | GO:0005737: cytoplasm | 3.33E-02 |
| 23 | GO:0012505: endomembrane system | 4.48E-02 |
| 24 | GO:0000139: Golgi membrane | 4.56E-02 |