Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G22060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070212: protein poly-ADP-ribosylation0.00E+00
2GO:0045792: negative regulation of cell size0.00E+00
3GO:0071731: response to nitric oxide0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
6GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
7GO:0072321: chaperone-mediated protein transport0.00E+00
8GO:0071433: cell wall repair0.00E+00
9GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
10GO:0043462: regulation of ATPase activity0.00E+00
11GO:0044794: positive regulation by host of viral process0.00E+00
12GO:0006457: protein folding6.88E-12
13GO:0046686: response to cadmium ion2.79E-08
14GO:0042742: defense response to bacterium1.45E-06
15GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.26E-06
16GO:0009626: plant-type hypersensitive response2.91E-06
17GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.13E-06
18GO:0051252: regulation of RNA metabolic process3.13E-06
19GO:0055074: calcium ion homeostasis1.13E-05
20GO:0009651: response to salt stress1.36E-05
21GO:0015696: ammonium transport2.55E-05
22GO:0072488: ammonium transmembrane transport4.61E-05
23GO:0060548: negative regulation of cell death4.61E-05
24GO:0006468: protein phosphorylation4.76E-05
25GO:0034976: response to endoplasmic reticulum stress6.88E-05
26GO:0045454: cell redox homeostasis1.64E-04
27GO:0009617: response to bacterium2.53E-04
28GO:0009609: response to symbiotic bacterium2.60E-04
29GO:0009270: response to humidity2.60E-04
30GO:0060862: negative regulation of floral organ abscission2.60E-04
31GO:0010193: response to ozone2.96E-04
32GO:0030968: endoplasmic reticulum unfolded protein response3.02E-04
33GO:0015865: purine nucleotide transport5.74E-04
34GO:0031349: positive regulation of defense response5.74E-04
35GO:0010541: acropetal auxin transport5.74E-04
36GO:0051258: protein polymerization5.74E-04
37GO:0019725: cellular homeostasis5.74E-04
38GO:0002221: pattern recognition receptor signaling pathway5.74E-04
39GO:0031204: posttranslational protein targeting to membrane, translocation5.74E-04
40GO:2000072: regulation of defense response to fungus, incompatible interaction5.74E-04
41GO:0045041: protein import into mitochondrial intermembrane space5.74E-04
42GO:1905182: positive regulation of urease activity5.74E-04
43GO:0080181: lateral root branching5.74E-04
44GO:0006886: intracellular protein transport8.83E-04
45GO:0015695: organic cation transport9.31E-04
46GO:0006954: inflammatory response9.31E-04
47GO:1902626: assembly of large subunit precursor of preribosome9.31E-04
48GO:0010581: regulation of starch biosynthetic process9.31E-04
49GO:1900140: regulation of seedling development9.31E-04
50GO:0010359: regulation of anion channel activity9.31E-04
51GO:0045793: positive regulation of cell size9.31E-04
52GO:0010186: positive regulation of cellular defense response9.31E-04
53GO:0045039: protein import into mitochondrial inner membrane9.31E-04
54GO:0048281: inflorescence morphogenesis9.31E-04
55GO:0006979: response to oxidative stress1.03E-03
56GO:0000027: ribosomal large subunit assembly1.17E-03
57GO:0009863: salicylic acid mediated signaling pathway1.17E-03
58GO:0009408: response to heat1.20E-03
59GO:0043207: response to external biotic stimulus1.33E-03
60GO:0046902: regulation of mitochondrial membrane permeability1.33E-03
61GO:0072334: UDP-galactose transmembrane transport1.33E-03
62GO:0007276: gamete generation1.33E-03
63GO:0006168: adenine salvage1.33E-03
64GO:0051131: chaperone-mediated protein complex assembly1.33E-03
65GO:0001676: long-chain fatty acid metabolic process1.33E-03
66GO:0000187: activation of MAPK activity1.33E-03
67GO:0006166: purine ribonucleoside salvage1.33E-03
68GO:0061077: chaperone-mediated protein folding1.41E-03
69GO:0016998: cell wall macromolecule catabolic process1.41E-03
70GO:0000460: maturation of 5.8S rRNA1.78E-03
71GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA1.78E-03
72GO:0010188: response to microbial phytotoxin1.78E-03
73GO:0080142: regulation of salicylic acid biosynthetic process1.78E-03
74GO:0046283: anthocyanin-containing compound metabolic process2.27E-03
75GO:0006564: L-serine biosynthetic process2.27E-03
76GO:0031365: N-terminal protein amino acid modification2.27E-03
77GO:0044209: AMP salvage2.27E-03
78GO:0006662: glycerol ether metabolic process2.29E-03
79GO:0006952: defense response2.71E-03
80GO:0009553: embryo sac development2.73E-03
81GO:0060918: auxin transport2.80E-03
82GO:0009228: thiamine biosynthetic process2.80E-03
83GO:0010942: positive regulation of cell death2.80E-03
84GO:0000470: maturation of LSU-rRNA2.80E-03
85GO:0043248: proteasome assembly2.80E-03
86GO:0010200: response to chitin3.01E-03
87GO:0042026: protein refolding3.36E-03
88GO:0006458: 'de novo' protein folding3.36E-03
89GO:0006694: steroid biosynthetic process3.36E-03
90GO:0009610: response to symbiotic fungus3.97E-03
91GO:0009615: response to virus4.08E-03
92GO:0009816: defense response to bacterium, incompatible interaction4.32E-03
93GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.60E-03
94GO:0009690: cytokinin metabolic process4.60E-03
95GO:0006605: protein targeting4.60E-03
96GO:0050821: protein stabilization4.60E-03
97GO:0006102: isocitrate metabolic process4.60E-03
98GO:0006950: response to stress4.80E-03
99GO:0016049: cell growth5.06E-03
100GO:0009751: response to salicylic acid5.07E-03
101GO:0010204: defense response signaling pathway, resistance gene-independent5.27E-03
102GO:0008219: cell death5.32E-03
103GO:0015031: protein transport5.50E-03
104GO:0006499: N-terminal protein myristoylation5.87E-03
105GO:0006189: 'de novo' IMP biosynthetic process5.98E-03
106GO:0015780: nucleotide-sugar transport5.98E-03
107GO:0048527: lateral root development6.15E-03
108GO:0090332: stomatal closure6.71E-03
109GO:0007166: cell surface receptor signaling pathway6.74E-03
110GO:0034599: cellular response to oxidative stress7.05E-03
111GO:0006099: tricarboxylic acid cycle7.05E-03
112GO:0010162: seed dormancy process7.47E-03
113GO:0051555: flavonol biosynthetic process7.47E-03
114GO:0009870: defense response signaling pathway, resistance gene-dependent7.47E-03
115GO:0000103: sulfate assimilation7.47E-03
116GO:0006032: chitin catabolic process7.47E-03
117GO:0010215: cellulose microfibril organization7.47E-03
118GO:0072593: reactive oxygen species metabolic process8.27E-03
119GO:0043085: positive regulation of catalytic activity8.27E-03
120GO:0051707: response to other organism8.70E-03
121GO:0012501: programmed cell death9.09E-03
122GO:0016925: protein sumoylation9.09E-03
123GO:0071365: cellular response to auxin stimulus9.09E-03
124GO:0006626: protein targeting to mitochondrion9.94E-03
125GO:0006807: nitrogen compound metabolic process9.94E-03
126GO:0010075: regulation of meristem growth9.94E-03
127GO:0042254: ribosome biogenesis1.02E-02
128GO:0048467: gynoecium development1.08E-02
129GO:0002237: response to molecule of bacterial origin1.08E-02
130GO:0009266: response to temperature stimulus1.08E-02
131GO:0009934: regulation of meristem structural organization1.08E-02
132GO:0010167: response to nitrate1.17E-02
133GO:0009969: xyloglucan biosynthetic process1.17E-02
134GO:0006486: protein glycosylation1.18E-02
135GO:0009944: polarity specification of adaxial/abaxial axis1.36E-02
136GO:0030150: protein import into mitochondrial matrix1.36E-02
137GO:0010187: negative regulation of seed germination1.36E-02
138GO:0009116: nucleoside metabolic process1.36E-02
139GO:0016192: vesicle-mediated transport1.39E-02
140GO:0046777: protein autophosphorylation1.42E-02
141GO:0051302: regulation of cell division1.46E-02
142GO:0015992: proton transport1.56E-02
143GO:0009814: defense response, incompatible interaction1.67E-02
144GO:0030433: ubiquitin-dependent ERAD pathway1.67E-02
145GO:0007005: mitochondrion organization1.67E-02
146GO:0009624: response to nematode1.68E-02
147GO:0018105: peptidyl-serine phosphorylation1.73E-02
148GO:0009294: DNA mediated transformation1.77E-02
149GO:0009411: response to UV1.77E-02
150GO:0055114: oxidation-reduction process1.83E-02
151GO:0009306: protein secretion1.88E-02
152GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.99E-02
153GO:0034220: ion transmembrane transport2.11E-02
154GO:0010051: xylem and phloem pattern formation2.11E-02
155GO:0010118: stomatal movement2.11E-02
156GO:0010197: polar nucleus fusion2.22E-02
157GO:0048868: pollen tube development2.22E-02
158GO:0009845: seed germination2.28E-02
159GO:0006623: protein targeting to vacuole2.46E-02
160GO:0000302: response to reactive oxygen species2.58E-02
161GO:0006891: intra-Golgi vesicle-mediated transport2.58E-02
162GO:0016032: viral process2.70E-02
163GO:0050832: defense response to fungus2.80E-02
164GO:0007623: circadian rhythm2.90E-02
165GO:0010150: leaf senescence2.90E-02
166GO:0009567: double fertilization forming a zygote and endosperm2.96E-02
167GO:0010286: heat acclimation3.09E-02
168GO:0009911: positive regulation of flower development3.35E-02
169GO:0009414: response to water deprivation3.40E-02
170GO:0048573: photoperiodism, flowering3.77E-02
171GO:0009817: defense response to fungus, incompatible interaction4.05E-02
172GO:0009832: plant-type cell wall biogenesis4.20E-02
173GO:0010311: lateral root formation4.20E-02
174GO:0009407: toxin catabolic process4.34E-02
175GO:0009555: pollen development4.35E-02
176GO:0010119: regulation of stomatal movement4.49E-02
177GO:0009631: cold acclimation4.49E-02
178GO:0035556: intracellular signal transduction4.65E-02
179GO:0009867: jasmonic acid mediated signaling pathway4.79E-02
180GO:0045087: innate immune response4.79E-02
RankGO TermAdjusted P value
1GO:0052873: FMN reductase (NADPH) activity0.00E+00
2GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
5GO:0008752: FMN reductase activity0.00E+00
6GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
7GO:0051082: unfolded protein binding1.17E-11
8GO:0005524: ATP binding4.74E-08
9GO:0008428: ribonuclease inhibitor activity3.13E-06
10GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity3.13E-06
11GO:0043021: ribonucleoprotein complex binding3.13E-06
12GO:0005460: UDP-glucose transmembrane transporter activity2.55E-05
13GO:0005459: UDP-galactose transmembrane transporter activity7.32E-05
14GO:0008948: oxaloacetate decarboxylase activity7.32E-05
15GO:0008519: ammonium transmembrane transporter activity1.07E-04
16GO:0008320: protein transmembrane transporter activity1.93E-04
17GO:0005509: calcium ion binding2.25E-04
18GO:0004714: transmembrane receptor protein tyrosine kinase activity2.45E-04
19GO:0080042: ADP-glucose pyrophosphohydrolase activity2.60E-04
20GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.60E-04
21GO:0048037: cofactor binding2.60E-04
22GO:0031127: alpha-(1,2)-fucosyltransferase activity2.60E-04
23GO:0004638: phosphoribosylaminoimidazole carboxylase activity2.60E-04
24GO:0016301: kinase activity5.05E-04
25GO:0017110: nucleoside-diphosphatase activity5.74E-04
26GO:0004775: succinate-CoA ligase (ADP-forming) activity5.74E-04
27GO:0019172: glyoxalase III activity5.74E-04
28GO:0008517: folic acid transporter activity5.74E-04
29GO:0004776: succinate-CoA ligase (GDP-forming) activity5.74E-04
30GO:0080041: ADP-ribose pyrophosphohydrolase activity5.74E-04
31GO:0004617: phosphoglycerate dehydrogenase activity5.74E-04
32GO:0004674: protein serine/threonine kinase activity7.37E-04
33GO:0000166: nucleotide binding8.53E-04
34GO:0008565: protein transporter activity8.60E-04
35GO:0003746: translation elongation factor activity9.08E-04
36GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity9.31E-04
37GO:0004148: dihydrolipoyl dehydrogenase activity9.31E-04
38GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.31E-04
39GO:0004557: alpha-galactosidase activity9.31E-04
40GO:0052692: raffinose alpha-galactosidase activity9.31E-04
41GO:0000030: mannosyltransferase activity9.31E-04
42GO:0016151: nickel cation binding9.31E-04
43GO:0009678: hydrogen-translocating pyrophosphatase activity1.33E-03
44GO:0003999: adenine phosphoribosyltransferase activity1.33E-03
45GO:0004449: isocitrate dehydrogenase (NAD+) activity1.33E-03
46GO:0051287: NAD binding1.58E-03
47GO:0005507: copper ion binding1.71E-03
48GO:0005086: ARF guanyl-nucleotide exchange factor activity1.78E-03
49GO:0003756: protein disulfide isomerase activity1.82E-03
50GO:0047134: protein-disulfide reductase activity1.97E-03
51GO:0031386: protein tag2.27E-03
52GO:0047631: ADP-ribose diphosphatase activity2.27E-03
53GO:0005471: ATP:ADP antiporter activity2.27E-03
54GO:0002020: protease binding2.27E-03
55GO:0004791: thioredoxin-disulfide reductase activity2.47E-03
56GO:0016887: ATPase activity2.60E-03
57GO:0000210: NAD+ diphosphatase activity2.80E-03
58GO:0015035: protein disulfide oxidoreductase activity2.94E-03
59GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.22E-03
60GO:0102391: decanoate--CoA ligase activity3.36E-03
61GO:0004602: glutathione peroxidase activity3.36E-03
62GO:0004656: procollagen-proline 4-dioxygenase activity3.36E-03
63GO:0004427: inorganic diphosphatase activity3.97E-03
64GO:0043295: glutathione binding3.97E-03
65GO:0004467: long-chain fatty acid-CoA ligase activity3.97E-03
66GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.97E-03
67GO:0008235: metalloexopeptidase activity3.97E-03
68GO:0009931: calcium-dependent protein serine/threonine kinase activity4.56E-03
69GO:0047893: flavonol 3-O-glucosyltransferase activity4.60E-03
70GO:0005544: calcium-dependent phospholipid binding4.60E-03
71GO:0004708: MAP kinase kinase activity4.60E-03
72GO:0004683: calmodulin-dependent protein kinase activity4.80E-03
73GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.20E-03
74GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity5.32E-03
75GO:0008417: fucosyltransferase activity5.98E-03
76GO:0050897: cobalt ion binding6.15E-03
77GO:0004713: protein tyrosine kinase activity7.47E-03
78GO:0004568: chitinase activity7.47E-03
79GO:0004177: aminopeptidase activity8.27E-03
80GO:0008559: xenobiotic-transporting ATPase activity8.27E-03
81GO:0044183: protein binding involved in protein folding8.27E-03
82GO:0031072: heat shock protein binding9.94E-03
83GO:0008061: chitin binding1.17E-02
84GO:0003712: transcription cofactor activity1.17E-02
85GO:0031418: L-ascorbic acid binding1.36E-02
86GO:0004407: histone deacetylase activity1.36E-02
87GO:0080043: quercetin 3-O-glucosyltransferase activity1.53E-02
88GO:0080044: quercetin 7-O-glucosyltransferase activity1.53E-02
89GO:0035251: UDP-glucosyltransferase activity1.56E-02
90GO:0004707: MAP kinase activity1.56E-02
91GO:0033612: receptor serine/threonine kinase binding1.56E-02
92GO:0030246: carbohydrate binding1.93E-02
93GO:0016758: transferase activity, transferring hexosyl groups2.05E-02
94GO:0003924: GTPase activity2.13E-02
95GO:0004672: protein kinase activity2.18E-02
96GO:0030276: clathrin binding2.22E-02
97GO:0010181: FMN binding2.34E-02
98GO:0016853: isomerase activity2.34E-02
99GO:0005525: GTP binding2.60E-02
100GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.09E-02
101GO:0016597: amino acid binding3.22E-02
102GO:0008194: UDP-glycosyltransferase activity3.25E-02
103GO:0015250: water channel activity3.35E-02
104GO:0004721: phosphoprotein phosphatase activity3.77E-02
105GO:0016798: hydrolase activity, acting on glycosyl bonds3.77E-02
106GO:0004222: metalloendopeptidase activity4.34E-02
107GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.49E-02
108GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.79E-02
RankGO TermAdjusted P value
1GO:0005784: Sec61 translocon complex0.00E+00
2GO:0031205: endoplasmic reticulum Sec complex0.00E+00
3GO:0042719: mitochondrial intermembrane space protein transporter complex0.00E+00
4GO:0005886: plasma membrane5.37E-17
5GO:0005788: endoplasmic reticulum lumen2.94E-11
6GO:0005783: endoplasmic reticulum8.28E-09
7GO:0005774: vacuolar membrane8.12E-08
8GO:0005773: vacuole2.33E-07
9GO:0070545: PeBoW complex3.13E-06
10GO:0005829: cytosol1.85E-05
11GO:0009506: plasmodesma1.92E-05
12GO:0005618: cell wall3.01E-05
13GO:0030687: preribosome, large subunit precursor1.93E-04
14GO:0005794: Golgi apparatus2.73E-04
15GO:0030665: clathrin-coated vesicle membrane4.33E-04
16GO:0005740: mitochondrial envelope5.06E-04
17GO:0030134: ER to Golgi transport vesicle5.74E-04
18GO:0048046: apoplast8.46E-04
19GO:0046861: glyoxysomal membrane9.31E-04
20GO:0009507: chloroplast9.35E-04
21GO:0030176: integral component of endoplasmic reticulum membrane9.50E-04
22GO:0031225: anchored component of membrane2.05E-03
23GO:0005747: mitochondrial respiratory chain complex I2.33E-03
24GO:0005789: endoplasmic reticulum membrane2.55E-03
25GO:0005730: nucleolus3.19E-03
26GO:0016363: nuclear matrix3.36E-03
27GO:0005801: cis-Golgi network3.36E-03
28GO:0030173: integral component of Golgi membrane3.36E-03
29GO:0032580: Golgi cisterna membrane3.42E-03
30GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.97E-03
31GO:0030131: clathrin adaptor complex4.60E-03
32GO:0005759: mitochondrial matrix5.04E-03
33GO:0009514: glyoxysome5.27E-03
34GO:0009505: plant-type cell wall5.35E-03
35GO:0017119: Golgi transport complex7.47E-03
36GO:0005852: eukaryotic translation initiation factor 3 complex8.27E-03
37GO:0031012: extracellular matrix9.94E-03
38GO:0005795: Golgi stack1.17E-02
39GO:0005758: mitochondrial intermembrane space1.36E-02
40GO:0005741: mitochondrial outer membrane1.56E-02
41GO:0005744: mitochondrial inner membrane presequence translocase complex1.88E-02
42GO:0005743: mitochondrial inner membrane1.95E-02
43GO:0005739: mitochondrion2.25E-02
44GO:0016592: mediator complex2.70E-02
45GO:0016021: integral component of membrane3.11E-02
46GO:0005887: integral component of plasma membrane3.13E-02
47GO:0016020: membrane3.20E-02
48GO:0030529: intracellular ribonucleoprotein complex3.35E-02
49GO:0000932: P-body3.35E-02
50GO:0000151: ubiquitin ligase complex4.05E-02
51GO:0019005: SCF ubiquitin ligase complex4.05E-02
52GO:0000325: plant-type vacuole4.49E-02
53GO:0015934: large ribosomal subunit4.49E-02
54GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.90E-02
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Gene type



Gene DE type