GO Enrichment Analysis of Co-expressed Genes with
AT5G20130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 8 | GO:0015979: photosynthesis | 1.58E-09 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 1.90E-09 |
| 10 | GO:0009658: chloroplast organization | 6.16E-09 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.93E-06 |
| 12 | GO:0006000: fructose metabolic process | 7.09E-06 |
| 13 | GO:0006810: transport | 1.12E-05 |
| 14 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.63E-05 |
| 15 | GO:0019253: reductive pentose-phosphate cycle | 2.72E-05 |
| 16 | GO:0006546: glycine catabolic process | 3.00E-05 |
| 17 | GO:0019464: glycine decarboxylation via glycine cleavage system | 3.00E-05 |
| 18 | GO:0061077: chaperone-mediated protein folding | 6.32E-05 |
| 19 | GO:0010190: cytochrome b6f complex assembly | 7.11E-05 |
| 20 | GO:0042026: protein refolding | 9.88E-05 |
| 21 | GO:0016117: carotenoid biosynthetic process | 1.07E-04 |
| 22 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.02E-04 |
| 23 | GO:1904964: positive regulation of phytol biosynthetic process | 2.02E-04 |
| 24 | GO:0033481: galacturonate biosynthetic process | 2.02E-04 |
| 25 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.02E-04 |
| 26 | GO:0032544: plastid translation | 2.08E-04 |
| 27 | GO:0006002: fructose 6-phosphate metabolic process | 2.08E-04 |
| 28 | GO:0071482: cellular response to light stimulus | 2.08E-04 |
| 29 | GO:0009657: plastid organization | 2.08E-04 |
| 30 | GO:0009735: response to cytokinin | 3.37E-04 |
| 31 | GO:0006352: DNA-templated transcription, initiation | 4.10E-04 |
| 32 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.10E-04 |
| 33 | GO:0018298: protein-chromophore linkage | 4.26E-04 |
| 34 | GO:0080183: response to photooxidative stress | 4.52E-04 |
| 35 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.52E-04 |
| 36 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.52E-04 |
| 37 | GO:0006094: gluconeogenesis | 5.33E-04 |
| 38 | GO:0009767: photosynthetic electron transport chain | 5.33E-04 |
| 39 | GO:0005986: sucrose biosynthetic process | 5.33E-04 |
| 40 | GO:0010020: chloroplast fission | 6.01E-04 |
| 41 | GO:0010207: photosystem II assembly | 6.01E-04 |
| 42 | GO:0006696: ergosterol biosynthetic process | 7.36E-04 |
| 43 | GO:0006424: glutamyl-tRNA aminoacylation | 1.05E-03 |
| 44 | GO:0043572: plastid fission | 1.05E-03 |
| 45 | GO:2001141: regulation of RNA biosynthetic process | 1.05E-03 |
| 46 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.05E-03 |
| 47 | GO:0016556: mRNA modification | 1.05E-03 |
| 48 | GO:0071483: cellular response to blue light | 1.40E-03 |
| 49 | GO:0010037: response to carbon dioxide | 1.40E-03 |
| 50 | GO:0015976: carbon utilization | 1.40E-03 |
| 51 | GO:0045727: positive regulation of translation | 1.40E-03 |
| 52 | GO:2000122: negative regulation of stomatal complex development | 1.40E-03 |
| 53 | GO:0032543: mitochondrial translation | 1.78E-03 |
| 54 | GO:0010236: plastoquinone biosynthetic process | 1.78E-03 |
| 55 | GO:0006461: protein complex assembly | 1.78E-03 |
| 56 | GO:0016123: xanthophyll biosynthetic process | 1.78E-03 |
| 57 | GO:0019252: starch biosynthetic process | 1.85E-03 |
| 58 | GO:0006014: D-ribose metabolic process | 2.19E-03 |
| 59 | GO:0042549: photosystem II stabilization | 2.19E-03 |
| 60 | GO:0032973: amino acid export | 2.19E-03 |
| 61 | GO:0006458: 'de novo' protein folding | 2.63E-03 |
| 62 | GO:0030488: tRNA methylation | 2.63E-03 |
| 63 | GO:0009854: oxidative photosynthetic carbon pathway | 2.63E-03 |
| 64 | GO:0043090: amino acid import | 3.09E-03 |
| 65 | GO:0050829: defense response to Gram-negative bacterium | 3.09E-03 |
| 66 | GO:0015995: chlorophyll biosynthetic process | 3.35E-03 |
| 67 | GO:0048564: photosystem I assembly | 3.59E-03 |
| 68 | GO:0042255: ribosome assembly | 3.59E-03 |
| 69 | GO:0006353: DNA-templated transcription, termination | 3.59E-03 |
| 70 | GO:0017004: cytochrome complex assembly | 4.10E-03 |
| 71 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 4.10E-03 |
| 72 | GO:0080144: amino acid homeostasis | 4.65E-03 |
| 73 | GO:0016051: carbohydrate biosynthetic process | 4.69E-03 |
| 74 | GO:0009853: photorespiration | 4.69E-03 |
| 75 | GO:1900865: chloroplast RNA modification | 5.21E-03 |
| 76 | GO:0006535: cysteine biosynthetic process from serine | 5.80E-03 |
| 77 | GO:0000272: polysaccharide catabolic process | 6.41E-03 |
| 78 | GO:0019684: photosynthesis, light reaction | 6.41E-03 |
| 79 | GO:0006415: translational termination | 6.41E-03 |
| 80 | GO:0045037: protein import into chloroplast stroma | 7.04E-03 |
| 81 | GO:0090351: seedling development | 9.07E-03 |
| 82 | GO:0009225: nucleotide-sugar metabolic process | 9.07E-03 |
| 83 | GO:0005985: sucrose metabolic process | 9.07E-03 |
| 84 | GO:0009409: response to cold | 1.01E-02 |
| 85 | GO:0045454: cell redox homeostasis | 1.03E-02 |
| 86 | GO:0019344: cysteine biosynthetic process | 1.05E-02 |
| 87 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.13E-02 |
| 88 | GO:0016575: histone deacetylation | 1.13E-02 |
| 89 | GO:0006418: tRNA aminoacylation for protein translation | 1.13E-02 |
| 90 | GO:0007017: microtubule-based process | 1.13E-02 |
| 91 | GO:0046686: response to cadmium ion | 1.29E-02 |
| 92 | GO:0007005: mitochondrion organization | 1.29E-02 |
| 93 | GO:0080092: regulation of pollen tube growth | 1.29E-02 |
| 94 | GO:0042631: cellular response to water deprivation | 1.62E-02 |
| 95 | GO:0042335: cuticle development | 1.62E-02 |
| 96 | GO:0008360: regulation of cell shape | 1.71E-02 |
| 97 | GO:0006814: sodium ion transport | 1.80E-02 |
| 98 | GO:0080156: mitochondrial mRNA modification | 1.99E-02 |
| 99 | GO:0007623: circadian rhythm | 2.01E-02 |
| 100 | GO:0071555: cell wall organization | 2.05E-02 |
| 101 | GO:0032502: developmental process | 2.08E-02 |
| 102 | GO:0007264: small GTPase mediated signal transduction | 2.08E-02 |
| 103 | GO:0010286: heat acclimation | 2.38E-02 |
| 104 | GO:0071805: potassium ion transmembrane transport | 2.38E-02 |
| 105 | GO:0010027: thylakoid membrane organization | 2.58E-02 |
| 106 | GO:0009627: systemic acquired resistance | 2.80E-02 |
| 107 | GO:0008219: cell death | 3.12E-02 |
| 108 | GO:0009817: defense response to fungus, incompatible interaction | 3.12E-02 |
| 109 | GO:0048481: plant ovule development | 3.12E-02 |
| 110 | GO:0000160: phosphorelay signal transduction system | 3.23E-02 |
| 111 | GO:0010218: response to far red light | 3.35E-02 |
| 112 | GO:0009407: toxin catabolic process | 3.35E-02 |
| 113 | GO:0010119: regulation of stomatal movement | 3.46E-02 |
| 114 | GO:0009637: response to blue light | 3.69E-02 |
| 115 | GO:0046777: protein autophosphorylation | 4.12E-02 |
| 116 | GO:0006631: fatty acid metabolic process | 4.18E-02 |
| 117 | GO:0055114: oxidation-reduction process | 4.40E-02 |
| 118 | GO:0010114: response to red light | 4.42E-02 |
| 119 | GO:0009636: response to toxic substance | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 2 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 7 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 8 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 9 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 10 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 11 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 12 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 13 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 14 | GO:0004033: aldo-keto reductase (NADP) activity | 2.27E-08 |
| 15 | GO:0005528: FK506 binding | 1.14E-06 |
| 16 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.93E-06 |
| 17 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.63E-05 |
| 18 | GO:0001053: plastid sigma factor activity | 3.00E-05 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.00E-05 |
| 20 | GO:0016987: sigma factor activity | 3.00E-05 |
| 21 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.88E-05 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.10E-04 |
| 23 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.02E-04 |
| 24 | GO:0003867: 4-aminobutyrate transaminase activity | 2.02E-04 |
| 25 | GO:0051996: squalene synthase activity | 2.02E-04 |
| 26 | GO:0005509: calcium ion binding | 3.70E-04 |
| 27 | GO:0019843: rRNA binding | 3.73E-04 |
| 28 | GO:0044183: protein binding involved in protein folding | 4.10E-04 |
| 29 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.52E-04 |
| 30 | GO:0050017: L-3-cyanoalanine synthase activity | 4.52E-04 |
| 31 | GO:0010291: carotene beta-ring hydroxylase activity | 4.52E-04 |
| 32 | GO:0004618: phosphoglycerate kinase activity | 4.52E-04 |
| 33 | GO:0010297: heteropolysaccharide binding | 4.52E-04 |
| 34 | GO:0004047: aminomethyltransferase activity | 4.52E-04 |
| 35 | GO:0008967: phosphoglycolate phosphatase activity | 4.52E-04 |
| 36 | GO:0004222: metalloendopeptidase activity | 4.84E-04 |
| 37 | GO:0030267: glyoxylate reductase (NADP) activity | 7.36E-04 |
| 38 | GO:0070402: NADPH binding | 7.36E-04 |
| 39 | GO:0070330: aromatase activity | 7.36E-04 |
| 40 | GO:0003913: DNA photolyase activity | 7.36E-04 |
| 41 | GO:0002161: aminoacyl-tRNA editing activity | 7.36E-04 |
| 42 | GO:0004148: dihydrolipoyl dehydrogenase activity | 7.36E-04 |
| 43 | GO:0015079: potassium ion transmembrane transporter activity | 9.08E-04 |
| 44 | GO:0048487: beta-tubulin binding | 1.05E-03 |
| 45 | GO:0016149: translation release factor activity, codon specific | 1.05E-03 |
| 46 | GO:0008508: bile acid:sodium symporter activity | 1.05E-03 |
| 47 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.40E-03 |
| 48 | GO:0050378: UDP-glucuronate 4-epimerase activity | 1.40E-03 |
| 49 | GO:0043495: protein anchor | 1.40E-03 |
| 50 | GO:0018685: alkane 1-monooxygenase activity | 1.78E-03 |
| 51 | GO:0008374: O-acyltransferase activity | 1.78E-03 |
| 52 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.78E-03 |
| 53 | GO:0051082: unfolded protein binding | 1.79E-03 |
| 54 | GO:0048038: quinone binding | 1.98E-03 |
| 55 | GO:0080030: methyl indole-3-acetate esterase activity | 2.19E-03 |
| 56 | GO:0042578: phosphoric ester hydrolase activity | 2.19E-03 |
| 57 | GO:0008237: metallopeptidase activity | 2.54E-03 |
| 58 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.63E-03 |
| 59 | GO:0004124: cysteine synthase activity | 2.63E-03 |
| 60 | GO:0051920: peroxiredoxin activity | 2.63E-03 |
| 61 | GO:0004747: ribokinase activity | 2.63E-03 |
| 62 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.63E-03 |
| 63 | GO:0016168: chlorophyll binding | 3.01E-03 |
| 64 | GO:0019899: enzyme binding | 3.09E-03 |
| 65 | GO:0009881: photoreceptor activity | 3.09E-03 |
| 66 | GO:0016209: antioxidant activity | 3.59E-03 |
| 67 | GO:0008865: fructokinase activity | 3.59E-03 |
| 68 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.59E-03 |
| 69 | GO:0003843: 1,3-beta-D-glucan synthase activity | 4.10E-03 |
| 70 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.10E-03 |
| 71 | GO:0003747: translation release factor activity | 4.65E-03 |
| 72 | GO:0015386: potassium:proton antiporter activity | 6.41E-03 |
| 73 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.41E-03 |
| 74 | GO:0005198: structural molecule activity | 6.78E-03 |
| 75 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 7.04E-03 |
| 76 | GO:0000049: tRNA binding | 7.04E-03 |
| 77 | GO:0004089: carbonate dehydratase activity | 7.70E-03 |
| 78 | GO:0031072: heat shock protein binding | 7.70E-03 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.14E-03 |
| 80 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.37E-03 |
| 81 | GO:0031409: pigment binding | 9.79E-03 |
| 82 | GO:0051536: iron-sulfur cluster binding | 1.05E-02 |
| 83 | GO:0004407: histone deacetylase activity | 1.05E-02 |
| 84 | GO:0043424: protein histidine kinase binding | 1.13E-02 |
| 85 | GO:0005515: protein binding | 1.17E-02 |
| 86 | GO:0004176: ATP-dependent peptidase activity | 1.21E-02 |
| 87 | GO:0003924: GTPase activity | 1.34E-02 |
| 88 | GO:0022891: substrate-specific transmembrane transporter activity | 1.37E-02 |
| 89 | GO:0003727: single-stranded RNA binding | 1.45E-02 |
| 90 | GO:0004812: aminoacyl-tRNA ligase activity | 1.54E-02 |
| 91 | GO:0050662: coenzyme binding | 1.80E-02 |
| 92 | GO:0000156: phosphorelay response regulator activity | 2.18E-02 |
| 93 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.18E-02 |
| 94 | GO:0016759: cellulose synthase activity | 2.28E-02 |
| 95 | GO:0003824: catalytic activity | 2.36E-02 |
| 96 | GO:0005200: structural constituent of cytoskeleton | 2.38E-02 |
| 97 | GO:0008483: transaminase activity | 2.38E-02 |
| 98 | GO:0042802: identical protein binding | 2.56E-02 |
| 99 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.80E-02 |
| 100 | GO:0004683: calmodulin-dependent protein kinase activity | 2.90E-02 |
| 101 | GO:0008168: methyltransferase activity | 3.00E-02 |
| 102 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3.01E-02 |
| 103 | GO:0004601: peroxidase activity | 3.12E-02 |
| 104 | GO:0050897: cobalt ion binding | 3.46E-02 |
| 105 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.81E-02 |
| 106 | GO:0019825: oxygen binding | 4.28E-02 |
| 107 | GO:0004364: glutathione transferase activity | 4.30E-02 |
| 108 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.68E-02 |
| 109 | GO:0043621: protein self-association | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.00E-52 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 6.88E-27 |
| 5 | GO:0009941: chloroplast envelope | 2.92E-21 |
| 6 | GO:0009570: chloroplast stroma | 2.65E-18 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 9.11E-17 |
| 8 | GO:0009579: thylakoid | 7.17E-16 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.06E-12 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 2.66E-12 |
| 11 | GO:0009534: chloroplast thylakoid | 1.27E-09 |
| 12 | GO:0019898: extrinsic component of membrane | 3.54E-09 |
| 13 | GO:0030095: chloroplast photosystem II | 6.29E-09 |
| 14 | GO:0031977: thylakoid lumen | 1.41E-07 |
| 15 | GO:0010319: stromule | 4.64E-07 |
| 16 | GO:0005960: glycine cleavage complex | 1.63E-05 |
| 17 | GO:0010287: plastoglobule | 3.64E-05 |
| 18 | GO:0031969: chloroplast membrane | 4.32E-05 |
| 19 | GO:0042651: thylakoid membrane | 5.45E-05 |
| 20 | GO:0048046: apoplast | 7.75E-05 |
| 21 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.02E-04 |
| 22 | GO:0009706: chloroplast inner membrane | 2.59E-04 |
| 23 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.52E-04 |
| 24 | GO:0009523: photosystem II | 1.85E-03 |
| 25 | GO:0009536: plastid | 2.48E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 3.09E-03 |
| 27 | GO:0009539: photosystem II reaction center | 4.10E-03 |
| 28 | GO:0000148: 1,3-beta-D-glucan synthase complex | 4.10E-03 |
| 29 | GO:0045298: tubulin complex | 4.65E-03 |
| 30 | GO:0016324: apical plasma membrane | 5.80E-03 |
| 31 | GO:0005840: ribosome | 6.47E-03 |
| 32 | GO:0009508: plastid chromosome | 7.70E-03 |
| 33 | GO:0016021: integral component of membrane | 8.46E-03 |
| 34 | GO:0030076: light-harvesting complex | 9.07E-03 |
| 35 | GO:0009532: plastid stroma | 1.21E-02 |
| 36 | GO:0009522: photosystem I | 1.80E-02 |
| 37 | GO:0032580: Golgi cisterna membrane | 2.28E-02 |
| 38 | GO:0009295: nucleoid | 2.38E-02 |
| 39 | GO:0046658: anchored component of plasma membrane | 2.67E-02 |
| 40 | GO:0009707: chloroplast outer membrane | 3.12E-02 |
| 41 | GO:0015934: large ribosomal subunit | 3.46E-02 |
| 42 | GO:0005874: microtubule | 3.73E-02 |
| 43 | GO:0005819: spindle | 3.93E-02 |