Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G20070

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
2GO:0090393: sepal giant cell development0.00E+00
3GO:0036172: thiamine salvage0.00E+00
4GO:0046471: phosphatidylglycerol metabolic process0.00E+00
5GO:0019464: glycine decarboxylation via glycine cleavage system1.41E-06
6GO:0006546: glycine catabolic process1.41E-06
7GO:0006098: pentose-phosphate shunt1.67E-05
8GO:0051775: response to redox state3.37E-05
9GO:0006659: phosphatidylserine biosynthetic process3.37E-05
10GO:0006094: gluconeogenesis4.16E-05
11GO:0043100: pyrimidine nucleobase salvage8.48E-05
12GO:0010275: NAD(P)H dehydrogenase complex assembly8.48E-05
13GO:0044375: regulation of peroxisome size1.47E-04
14GO:0005977: glycogen metabolic process1.47E-04
15GO:0006011: UDP-glucose metabolic process1.47E-04
16GO:0032877: positive regulation of DNA endoreduplication2.18E-04
17GO:0006107: oxaloacetate metabolic process2.18E-04
18GO:0080001: mucilage extrusion from seed coat2.18E-04
19GO:0042823: pyridoxal phosphate biosynthetic process2.18E-04
20GO:0006021: inositol biosynthetic process2.95E-04
21GO:0006734: NADH metabolic process2.95E-04
22GO:0009229: thiamine diphosphate biosynthetic process3.77E-04
23GO:0048359: mucilage metabolic process involved in seed coat development3.77E-04
24GO:0016120: carotene biosynthetic process3.77E-04
25GO:0043097: pyrimidine nucleoside salvage3.77E-04
26GO:0010942: positive regulation of cell death4.63E-04
27GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.63E-04
28GO:0070814: hydrogen sulfide biosynthetic process4.63E-04
29GO:0006206: pyrimidine nucleobase metabolic process4.63E-04
30GO:0009228: thiamine biosynthetic process4.63E-04
31GO:0009854: oxidative photosynthetic carbon pathway5.53E-04
32GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.53E-04
33GO:0045926: negative regulation of growth5.53E-04
34GO:0052543: callose deposition in cell wall7.44E-04
35GO:0016559: peroxisome fission7.44E-04
36GO:0048564: photosystem I assembly7.44E-04
37GO:0071482: cellular response to light stimulus8.45E-04
38GO:0006096: glycolytic process9.21E-04
39GO:0009056: catabolic process9.49E-04
40GO:0046686: response to cadmium ion1.04E-03
41GO:0055114: oxidation-reduction process1.13E-03
42GO:0010192: mucilage biosynthetic process1.17E-03
43GO:0009970: cellular response to sulfate starvation1.17E-03
44GO:0000103: sulfate assimilation1.17E-03
45GO:0018119: peptidyl-cysteine S-nitrosylation1.28E-03
46GO:0006108: malate metabolic process1.52E-03
47GO:0019253: reductive pentose-phosphate cycle1.65E-03
48GO:0007031: peroxisome organization1.78E-03
49GO:0042343: indole glucosinolate metabolic process1.78E-03
50GO:0009833: plant-type primary cell wall biogenesis1.91E-03
51GO:0006833: water transport1.91E-03
52GO:0006636: unsaturated fatty acid biosynthetic process1.91E-03
53GO:0098542: defense response to other organism2.33E-03
54GO:0006730: one-carbon metabolic process2.48E-03
55GO:0016226: iron-sulfur cluster assembly2.48E-03
56GO:0030433: ubiquitin-dependent ERAD pathway2.48E-03
57GO:0010214: seed coat development2.78E-03
58GO:0019722: calcium-mediated signaling2.78E-03
59GO:0016117: carotenoid biosynthetic process2.94E-03
60GO:0034220: ion transmembrane transport3.09E-03
61GO:0042631: cellular response to water deprivation3.09E-03
62GO:0007049: cell cycle3.18E-03
63GO:0009741: response to brassinosteroid3.25E-03
64GO:0007059: chromosome segregation3.42E-03
65GO:0008654: phospholipid biosynthetic process3.59E-03
66GO:0009791: post-embryonic development3.59E-03
67GO:0007264: small GTPase mediated signal transduction3.93E-03
68GO:0010583: response to cyclopentenone3.93E-03
69GO:0007267: cell-cell signaling4.46E-03
70GO:0051607: defense response to virus4.64E-03
71GO:0030244: cellulose biosynthetic process5.79E-03
72GO:0009832: plant-type cell wall biogenesis5.99E-03
73GO:0009853: photorespiration6.82E-03
74GO:0006099: tricarboxylic acid cycle7.04E-03
75GO:0042546: cell wall biogenesis8.37E-03
76GO:0000209: protein polyubiquitination8.37E-03
77GO:0051301: cell division1.00E-02
78GO:0051726: regulation of cell cycle1.34E-02
79GO:0009742: brassinosteroid mediated signaling pathway1.34E-02
80GO:0009058: biosynthetic process1.56E-02
81GO:0006633: fatty acid biosynthetic process1.77E-02
82GO:0071555: cell wall organization1.87E-02
83GO:0042742: defense response to bacterium1.87E-02
84GO:0010468: regulation of gene expression2.15E-02
85GO:0009409: response to cold2.53E-02
86GO:0009658: chloroplast organization2.58E-02
87GO:0006810: transport2.75E-02
88GO:0005975: carbohydrate metabolic process2.84E-02
89GO:0009723: response to ethylene2.87E-02
90GO:0080167: response to karrikin3.01E-02
91GO:0044550: secondary metabolite biosynthetic process3.20E-02
92GO:0008152: metabolic process4.26E-02
93GO:0016310: phosphorylation4.57E-02
RankGO TermAdjusted P value
1GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
2GO:0008465: glycerate dehydrogenase activity0.00E+00
3GO:0004417: hydroxyethylthiazole kinase activity0.00E+00
4GO:0016719: carotene 7,8-desaturase activity0.00E+00
5GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
6GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
7GO:0015205: nucleobase transmembrane transporter activity0.00E+00
8GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
9GO:0008974: phosphoribulokinase activity0.00E+00
10GO:0004375: glycine dehydrogenase (decarboxylating) activity7.25E-07
11GO:0004332: fructose-bisphosphate aldolase activity3.75E-06
12GO:0008746: NAD(P)+ transhydrogenase activity3.37E-05
13GO:0004512: inositol-3-phosphate synthase activity8.48E-05
14GO:0004781: sulfate adenylyltransferase (ATP) activity1.47E-04
15GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.47E-04
16GO:0032947: protein complex scaffold1.47E-04
17GO:0016615: malate dehydrogenase activity4.63E-04
18GO:2001070: starch binding4.63E-04
19GO:0030060: L-malate dehydrogenase activity5.53E-04
20GO:0004849: uridine kinase activity5.53E-04
21GO:0004860: protein kinase inhibitor activity1.28E-03
22GO:0004252: serine-type endopeptidase activity1.50E-03
23GO:0004089: carbonate dehydratase activity1.52E-03
24GO:0008266: poly(U) RNA binding1.65E-03
25GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.91E-03
26GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.91E-03
27GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.91E-03
28GO:0051536: iron-sulfur cluster binding2.05E-03
29GO:0004707: MAP kinase activity2.33E-03
30GO:0016760: cellulose synthase (UDP-forming) activity2.63E-03
31GO:0008080: N-acetyltransferase activity3.25E-03
32GO:0019901: protein kinase binding3.59E-03
33GO:0003824: catalytic activity3.62E-03
34GO:0048038: quinone binding3.76E-03
35GO:0016759: cellulose synthase activity4.28E-03
36GO:0015250: water channel activity4.83E-03
37GO:0004693: cyclin-dependent protein serine/threonine kinase activity6.20E-03
38GO:0016787: hydrolase activity8.44E-03
39GO:0005198: structural molecule activity8.82E-03
40GO:0051287: NAD binding9.30E-03
41GO:0031625: ubiquitin protein ligase binding1.08E-02
42GO:0016746: transferase activity, transferring acyl groups1.31E-02
43GO:0005506: iron ion binding1.84E-02
44GO:0042802: identical protein binding2.24E-02
45GO:0016491: oxidoreductase activity2.46E-02
46GO:0061630: ubiquitin protein ligase activity3.12E-02
47GO:0052689: carboxylic ester hydrolase activity3.23E-02
48GO:0004871: signal transducer activity3.54E-02
49GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.62E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast1.29E-07
2GO:0009941: chloroplast envelope3.84E-07
3GO:0009507: chloroplast7.01E-07
4GO:0005960: glycine cleavage complex7.25E-07
5GO:0009570: chloroplast stroma1.52E-06
6GO:0009509: chromoplast1.47E-04
7GO:0009579: thylakoid2.32E-04
8GO:0009526: plastid envelope2.95E-04
9GO:0005779: integral component of peroxisomal membrane8.45E-04
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.49E-04
11GO:0005765: lysosomal membrane1.28E-03
12GO:0010287: plastoglobule1.29E-03
13GO:0019013: viral nucleocapsid1.52E-03
14GO:0009535: chloroplast thylakoid membrane1.79E-03
15GO:0005783: endoplasmic reticulum2.52E-03
16GO:0031969: chloroplast membrane3.53E-03
17GO:0005778: peroxisomal membrane4.46E-03
18GO:0010319: stromule4.46E-03
19GO:0009707: chloroplast outer membrane5.79E-03
20GO:0005819: spindle7.25E-03
21GO:0031902: late endosome membrane7.69E-03
22GO:0031977: thylakoid lumen7.69E-03
23GO:0005777: peroxisome1.06E-02
24GO:0009534: chloroplast thylakoid1.11E-02
25GO:0009505: plant-type cell wall2.34E-02
26GO:0016020: membrane3.20E-02
27GO:0005887: integral component of plasma membrane4.94E-02
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Gene type



Gene DE type