co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
2	GO:0045792: negative regulation of cell size	0.00E+00
3	GO:2001142: nicotinate transport	0.00E+00
4	GO:0019428: allantoin biosynthetic process	0.00E+00
5	GO:0051553: flavone biosynthetic process	0.00E+00
6	GO:2001143: N-methylnicotinate transport	0.00E+00
7	GO:0042742: defense response to bacterium	1.18E-11
8	GO:0009751: response to salicylic acid	1.05E-08
9	GO:0006952: defense response	1.79E-08
10	GO:0009617: response to bacterium	3.87E-08
11	GO:0006468: protein phosphorylation	4.80E-08
12	GO:0031349: positive regulation of defense response	4.70E-06
13	GO:0009627: systemic acquired resistance	5.01E-06
14	GO:0006457: protein folding	6.08E-06
15	GO:0031348: negative regulation of defense response	9.32E-06
16	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	9.40E-06
17	GO:0043069: negative regulation of programmed cell death	3.27E-05
18	GO:0002239: response to oomycetes	3.71E-05
19	GO:0072334: UDP-galactose transmembrane transport	3.71E-05
20	GO:0010200: response to chitin	3.72E-05
21	GO:0007166: cell surface receptor signaling pathway	6.45E-05
22	GO:0060548: negative regulation of cell death	6.61E-05
23	GO:0009626: plant-type hypersensitive response	8.45E-05
24	GO:0009620: response to fungus	9.04E-05
25	GO:0070588: calcium ion transmembrane transport	9.25E-05
26	GO:0034976: response to endoplasmic reticulum stress	1.09E-04
27	GO:0009863: salicylic acid mediated signaling pathway	1.27E-04
28	GO:0050832: defense response to fungus	1.31E-04
29	GO:0010942: positive regulation of cell death	1.50E-04
30	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.05E-04
31	GO:0051707: response to other organism	2.68E-04
32	GO:0001560: regulation of cell growth by extracellular stimulus	3.22E-04
33	GO:0019628: urate catabolic process	3.22E-04
34	GO:0051245: negative regulation of cellular defense response	3.22E-04
35	GO:0009609: response to symbiotic bacterium	3.22E-04
36	GO:0009700: indole phytoalexin biosynthetic process	3.22E-04
37	GO:0055081: anion homeostasis	3.22E-04
38	GO:0010230: alternative respiration	3.22E-04
39	GO:0046244: salicylic acid catabolic process	3.22E-04
40	GO:0006680: glucosylceramide catabolic process	3.22E-04
41	GO:0060862: negative regulation of floral organ abscission	3.22E-04
42	GO:0006144: purine nucleobase metabolic process	3.22E-04
43	GO:0006102: isocitrate metabolic process	3.36E-04
44	GO:0010120: camalexin biosynthetic process	4.12E-04
45	GO:0010112: regulation of systemic acquired resistance	4.95E-04
46	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.85E-04
47	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.02E-04
48	GO:0080185: effector dependent induction by symbiont of host immune response	7.02E-04
49	GO:0010618: aerenchyma formation	7.02E-04
50	GO:0080181: lateral root branching	7.02E-04
51	GO:0015865: purine nucleotide transport	7.02E-04
52	GO:0051258: protein polymerization	7.02E-04
53	GO:0051252: regulation of RNA metabolic process	7.02E-04
54	GO:0002221: pattern recognition receptor signaling pathway	7.02E-04
55	GO:0008219: cell death	9.92E-04
56	GO:0048281: inflorescence morphogenesis	1.14E-03
57	GO:0015695: organic cation transport	1.14E-03
58	GO:0055074: calcium ion homeostasis	1.14E-03
59	GO:1900140: regulation of seedling development	1.14E-03
60	GO:0072661: protein targeting to plasma membrane	1.14E-03
61	GO:0006517: protein deglycosylation	1.14E-03
62	GO:0045087: innate immune response	1.33E-03
63	GO:0006886: intracellular protein transport	1.52E-03
64	GO:0080147: root hair cell development	1.57E-03
65	GO:0006487: protein N-linked glycosylation	1.57E-03
66	GO:0043207: response to external biotic stimulus	1.63E-03
67	GO:0046902: regulation of mitochondrial membrane permeability	1.63E-03
68	GO:0006612: protein targeting to membrane	1.63E-03
69	GO:0010148: transpiration	1.63E-03
70	GO:0006516: glycoprotein catabolic process	1.63E-03
71	GO:0015696: ammonium transport	1.63E-03
72	GO:0071323: cellular response to chitin	1.63E-03
73	GO:0051289: protein homotetramerization	1.63E-03
74	GO:0006515: misfolded or incompletely synthesized protein catabolic process	1.63E-03
75	GO:0000187: activation of MAPK activity	1.63E-03
76	GO:0046713: borate transport	1.63E-03
77	GO:0016998: cell wall macromolecule catabolic process	1.91E-03
78	GO:0045088: regulation of innate immune response	2.19E-03
79	GO:0072488: ammonium transmembrane transport	2.19E-03
80	GO:0010363: regulation of plant-type hypersensitive response	2.19E-03
81	GO:0010188: response to microbial phytotoxin	2.19E-03
82	GO:0080142: regulation of salicylic acid biosynthetic process	2.19E-03
83	GO:0009306: protein secretion	2.47E-03
84	GO:0055085: transmembrane transport	2.54E-03
85	GO:0006465: signal peptide processing	2.80E-03
86	GO:0000304: response to singlet oxygen	2.80E-03
87	GO:0009697: salicylic acid biosynthetic process	2.80E-03
88	GO:0046283: anthocyanin-containing compound metabolic process	2.80E-03
89	GO:0031365: N-terminal protein amino acid modification	2.80E-03
90	GO:0010197: polar nucleus fusion	3.12E-03
91	GO:0060918: auxin transport	3.46E-03
92	GO:0009759: indole glucosinolate biosynthetic process	3.46E-03
93	GO:0006623: protein targeting to vacuole	3.60E-03
94	GO:0002229: defense response to oomycetes	3.85E-03
95	GO:0000302: response to reactive oxygen species	3.85E-03
96	GO:0006891: intra-Golgi vesicle-mediated transport	3.85E-03
97	GO:0009409: response to cold	3.90E-03
98	GO:0010310: regulation of hydrogen peroxide metabolic process	4.17E-03
99	GO:0006694: steroid biosynthetic process	4.17E-03
100	GO:0030163: protein catabolic process	4.38E-03
101	GO:0009610: response to symbiotic fungus	4.92E-03
102	GO:0071446: cellular response to salicylic acid stimulus	4.92E-03
103	GO:1900056: negative regulation of leaf senescence	4.92E-03
104	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.92E-03
105	GO:0009615: response to virus	5.57E-03
106	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.71E-03
107	GO:0030162: regulation of proteolysis	5.71E-03
108	GO:0006605: protein targeting	5.71E-03
109	GO:0031540: regulation of anthocyanin biosynthetic process	5.71E-03
110	GO:0009816: defense response to bacterium, incompatible interaction	5.89E-03
111	GO:0045454: cell redox homeostasis	6.06E-03
112	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.55E-03
113	GO:0009699: phenylpropanoid biosynthetic process	6.55E-03
114	GO:0006002: fructose 6-phosphate metabolic process	6.55E-03
115	GO:0001510: RNA methylation	6.55E-03
116	GO:0010497: plasmodesmata-mediated intercellular transport	6.55E-03
117	GO:0010204: defense response signaling pathway, resistance gene-independent	6.55E-03
118	GO:0030968: endoplasmic reticulum unfolded protein response	6.55E-03
119	GO:0009817: defense response to fungus, incompatible interaction	7.27E-03
120	GO:0015780: nucleotide-sugar transport	7.42E-03
121	GO:0010205: photoinhibition	8.34E-03
122	GO:0048268: clathrin coat assembly	8.34E-03
123	GO:2000280: regulation of root development	8.34E-03
124	GO:0010119: regulation of stomatal movement	8.41E-03
125	GO:0006508: proteolysis	8.88E-03
126	GO:0009867: jasmonic acid mediated signaling pathway	9.22E-03
127	GO:0010215: cellulose microfibril organization	9.30E-03
128	GO:0006032: chitin catabolic process	9.30E-03
129	GO:0006099: tricarboxylic acid cycle	9.65E-03
130	GO:0019684: photosynthesis, light reaction	1.03E-02
131	GO:0072593: reactive oxygen species metabolic process	1.03E-02
132	GO:0006887: exocytosis	1.10E-02
133	GO:0012501: programmed cell death	1.13E-02
134	GO:0016925: protein sumoylation	1.13E-02
135	GO:0006829: zinc II ion transport	1.24E-02
136	GO:0010075: regulation of meristem growth	1.24E-02
137	GO:0008643: carbohydrate transport	1.29E-02
138	GO:0009934: regulation of meristem structural organization	1.35E-02
139	GO:0002237: response to molecule of bacterial origin	1.35E-02
140	GO:0031347: regulation of defense response	1.45E-02
141	GO:0042343: indole glucosinolate metabolic process	1.46E-02
142	GO:0000162: tryptophan biosynthetic process	1.58E-02
143	GO:0080167: response to karrikin	1.94E-02
144	GO:0098542: defense response to other organism	1.95E-02
145	GO:0048278: vesicle docking	1.95E-02
146	GO:0015992: proton transport	1.95E-02
147	GO:0006979: response to oxidative stress	1.96E-02
148	GO:0009814: defense response, incompatible interaction	2.08E-02
149	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.08E-02
150	GO:0030433: ubiquitin-dependent ERAD pathway	2.08E-02
151	GO:0019748: secondary metabolic process	2.08E-02
152	GO:0009411: response to UV	2.22E-02
153	GO:0009625: response to insect	2.22E-02
154	GO:0009742: brassinosteroid mediated signaling pathway	2.44E-02
155	GO:0007165: signal transduction	2.60E-02
156	GO:0000413: protein peptidyl-prolyl isomerization	2.63E-02
157	GO:0010051: xylem and phloem pattern formation	2.63E-02
158	GO:0055114: oxidation-reduction process	2.71E-02
159	GO:0015031: protein transport	2.90E-02
160	GO:0061025: membrane fusion	2.92E-02
161	GO:0010183: pollen tube guidance	3.07E-02
162	GO:0006629: lipid metabolic process	3.16E-02
163	GO:0010193: response to ozone	3.23E-02
164	GO:0006904: vesicle docking involved in exocytosis	3.86E-02
165	GO:0010150: leaf senescence	3.96E-02
166	GO:0051607: defense response to virus	4.03E-02
167	GO:0016126: sterol biosynthetic process	4.19E-02
168	GO:0001666: response to hypoxia	4.19E-02
169	GO:0009607: response to biotic stimulus	4.36E-02
170	GO:0006906: vesicle fusion	4.53E-02
171	GO:0016049: cell growth	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0090416: nicotinate transporter activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
5	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
6	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
7	GO:0005212: structural constituent of eye lens	0.00E+00
8	GO:0000247: C-8 sterol isomerase activity	0.00E+00
9	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
10	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
11	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
12	GO:0008752: FMN reductase activity	0.00E+00
13	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
14	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
15	GO:0005524: ATP binding	7.16E-08
16	GO:0016301: kinase activity	3.31E-07
17	GO:0004656: procollagen-proline 4-dioxygenase activity	3.88E-06
18	GO:0051082: unfolded protein binding	1.03E-05
19	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.36E-05
20	GO:0004674: protein serine/threonine kinase activity	2.48E-05
21	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.71E-05
22	GO:0005388: calcium-transporting ATPase activity	6.40E-05
23	GO:0004576: oligosaccharyl transferase activity	6.61E-05
24	GO:0004190: aspartic-type endopeptidase activity	9.25E-05
25	GO:0005459: UDP-galactose transmembrane transporter activity	1.04E-04
26	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.04E-04
27	GO:0004602: glutathione peroxidase activity	2.05E-04
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.86E-04
29	GO:1901149: salicylic acid binding	3.22E-04
30	GO:0015085: calcium ion transmembrane transporter activity	3.22E-04
31	GO:0004048: anthranilate phosphoribosyltransferase activity	3.22E-04
32	GO:0004348: glucosylceramidase activity	3.22E-04
33	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	3.22E-04
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.36E-04
35	GO:0008428: ribonuclease inhibitor activity	7.02E-04
36	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	7.02E-04
37	GO:0004806: triglyceride lipase activity	8.73E-04
38	GO:0005516: calmodulin binding	1.05E-03
39	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	1.14E-03
40	GO:0004148: dihydrolipoyl dehydrogenase activity	1.14E-03
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.14E-03
42	GO:0008061: chitin binding	1.28E-03
43	GO:0008565: protein transporter activity	1.37E-03
44	GO:0031418: L-ascorbic acid binding	1.57E-03
45	GO:0035529: NADH pyrophosphatase activity	1.63E-03
46	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.63E-03
47	GO:0005460: UDP-glucose transmembrane transporter activity	1.63E-03
48	GO:0005509: calcium ion binding	1.68E-03
49	GO:0033612: receptor serine/threonine kinase binding	1.91E-03
50	GO:0043495: protein anchor	2.19E-03
51	GO:0003756: protein disulfide isomerase activity	2.47E-03
52	GO:0008948: oxaloacetate decarboxylase activity	2.80E-03
53	GO:0031386: protein tag	2.80E-03
54	GO:0047631: ADP-ribose diphosphatase activity	2.80E-03
55	GO:0005471: ATP:ADP antiporter activity	2.80E-03
56	GO:0016298: lipase activity	2.81E-03
57	GO:0030276: clathrin binding	3.12E-03
58	GO:0000210: NAD+ diphosphatase activity	3.46E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.46E-03
60	GO:0008519: ammonium transmembrane transporter activity	3.46E-03
61	GO:0004672: protein kinase activity	4.65E-03
62	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.92E-03
63	GO:0008235: metalloexopeptidase activity	4.92E-03
64	GO:0004427: inorganic diphosphatase activity	4.92E-03
65	GO:0003872: 6-phosphofructokinase activity	4.92E-03
66	GO:0004708: MAP kinase kinase activity	5.71E-03
67	GO:0008173: RNA methyltransferase activity	6.55E-03
68	GO:0030247: polysaccharide binding	6.56E-03
69	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.34E-03
70	GO:0004568: chitinase activity	9.30E-03
71	GO:0005545: 1-phosphatidylinositol binding	9.30E-03
72	GO:0004713: protein tyrosine kinase activity	9.30E-03
73	GO:0004177: aminopeptidase activity	1.03E-02
74	GO:0008559: xenobiotic-transporting ATPase activity	1.03E-02
75	GO:0005262: calcium channel activity	1.24E-02
76	GO:0031072: heat shock protein binding	1.24E-02
77	GO:0051287: NAD binding	1.45E-02
78	GO:0046872: metal ion binding	1.49E-02
79	GO:0043531: ADP binding	1.66E-02
80	GO:0031625: ubiquitin protein ligase binding	1.79E-02
81	GO:0008324: cation transmembrane transporter activity	1.83E-02
82	GO:0005506: iron ion binding	1.89E-02
83	GO:0004707: MAP kinase activity	1.95E-02
84	GO:0022857: transmembrane transporter activity	2.16E-02
85	GO:0022891: substrate-specific transmembrane transporter activity	2.22E-02
86	GO:0008810: cellulase activity	2.22E-02
87	GO:0008514: organic anion transmembrane transporter activity	2.35E-02
88	GO:0004871: signal transducer activity	2.58E-02
89	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.68E-02
90	GO:0046873: metal ion transmembrane transporter activity	2.78E-02
91	GO:0010181: FMN binding	2.92E-02
92	GO:0030246: carbohydrate binding	3.07E-02
93	GO:0015297: antiporter activity	3.78E-02
94	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.86E-02
95	GO:0051213: dioxygenase activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.30E-17
2	GO:0005783: endoplasmic reticulum	2.82E-13
3	GO:0016021: integral component of membrane	5.19E-10
4	GO:0005788: endoplasmic reticulum lumen	4.46E-09
5	GO:0005774: vacuolar membrane	1.13E-07
6	GO:0009506: plasmodesma	3.21E-06
7	GO:0030665: clathrin-coated vesicle membrane	2.51E-05
8	GO:0005794: Golgi apparatus	7.67E-05
9	GO:0008250: oligosaccharyltransferase complex	1.04E-04
10	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	3.22E-04
11	GO:0005787: signal peptidase complex	3.22E-04
12	GO:0005773: vacuole	3.64E-04
13	GO:0005789: endoplasmic reticulum membrane	5.62E-04
14	GO:0005740: mitochondrial envelope	6.82E-04
15	GO:0017119: Golgi transport complex	6.82E-04
16	GO:0005887: integral component of plasma membrane	9.32E-04
17	GO:0005795: Golgi stack	1.28E-03
18	GO:0070062: extracellular exosome	1.63E-03
19	GO:0030660: Golgi-associated vesicle membrane	2.19E-03
20	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.19E-03
21	GO:0005945: 6-phosphofructokinase complex	2.80E-03
22	GO:0000164: protein phosphatase type 1 complex	2.80E-03
23	GO:0009505: plant-type cell wall	3.29E-03
24	GO:0005802: trans-Golgi network	4.02E-03
25	GO:0030173: integral component of Golgi membrane	4.17E-03
26	GO:0030131: clathrin adaptor complex	5.71E-03
27	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.71E-03
28	GO:0005618: cell wall	6.51E-03
29	GO:0031090: organelle membrane	7.42E-03
30	GO:0005765: lysosomal membrane	1.03E-02
31	GO:0031902: late endosome membrane	1.10E-02
32	GO:0046658: anchored component of plasma membrane	1.21E-02
33	GO:0031012: extracellular matrix	1.24E-02
34	GO:0031225: anchored component of membrane	1.24E-02
35	GO:0048046: apoplast	1.31E-02
36	GO:0030176: integral component of endoplasmic reticulum membrane	1.46E-02
37	GO:0005768: endosome	1.62E-02
38	GO:0005741: mitochondrial outer membrane	1.95E-02
39	GO:0005905: clathrin-coated pit	1.95E-02
40	GO:0030136: clathrin-coated vesicle	2.49E-02
41	GO:0009504: cell plate	3.07E-02
42	GO:0000139: Golgi membrane	3.22E-02
43	GO:0016592: mediator complex	3.38E-02
44	GO:0000145: exocyst	3.38E-02