Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G18900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0006858: extracellular transport0.00E+00
4GO:0039694: viral RNA genome replication0.00E+00
5GO:0046686: response to cadmium ion1.80E-06
6GO:0030163: protein catabolic process5.15E-05
7GO:0015031: protein transport6.40E-05
8GO:0046685: response to arsenic-containing substance8.74E-05
9GO:0006098: pentose-phosphate shunt8.74E-05
10GO:0044376: RNA polymerase II complex import to nucleus9.88E-05
11GO:0048448: stamen morphogenesis9.88E-05
12GO:0006177: GMP biosynthetic process9.88E-05
13GO:0010450: inflorescence meristem growth9.88E-05
14GO:0080173: male-female gamete recognition during double fertilization9.88E-05
15GO:1990022: RNA polymerase III complex localization to nucleus9.88E-05
16GO:0007051: spindle organization2.32E-04
17GO:0019752: carboxylic acid metabolic process2.32E-04
18GO:0031648: protein destabilization2.32E-04
19GO:0071395: cellular response to jasmonic acid stimulus2.32E-04
20GO:2000072: regulation of defense response to fungus, incompatible interaction2.32E-04
21GO:0048833: specification of floral organ number2.32E-04
22GO:0019521: D-gluconate metabolic process2.32E-04
23GO:0019374: galactolipid metabolic process2.32E-04
24GO:0010167: response to nitrate2.54E-04
25GO:0009410: response to xenobiotic stimulus3.86E-04
26GO:0033014: tetrapyrrole biosynthetic process5.54E-04
27GO:0001676: long-chain fatty acid metabolic process5.54E-04
28GO:0048194: Golgi vesicle budding5.54E-04
29GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA7.37E-04
30GO:0010188: response to microbial phytotoxin7.37E-04
31GO:0046345: abscisic acid catabolic process7.37E-04
32GO:0006564: L-serine biosynthetic process9.32E-04
33GO:0006405: RNA export from nucleus9.32E-04
34GO:0010405: arabinogalactan protein metabolic process1.14E-03
35GO:0043248: proteasome assembly1.14E-03
36GO:0018258: protein O-linked glycosylation via hydroxyproline1.14E-03
37GO:0000060: protein import into nucleus, translocation1.14E-03
38GO:0000082: G1/S transition of mitotic cell cycle1.59E-03
39GO:0071446: cellular response to salicylic acid stimulus1.59E-03
40GO:1900056: negative regulation of leaf senescence1.59E-03
41GO:0006605: protein targeting1.84E-03
42GO:0006644: phospholipid metabolic process1.84E-03
43GO:0009880: embryonic pattern specification2.10E-03
44GO:0006783: heme biosynthetic process2.37E-03
45GO:0009051: pentose-phosphate shunt, oxidative branch2.37E-03
46GO:0006511: ubiquitin-dependent protein catabolic process2.48E-03
47GO:0009651: response to salt stress2.48E-03
48GO:0055114: oxidation-reduction process2.56E-03
49GO:0030042: actin filament depolymerization2.65E-03
50GO:0048354: mucilage biosynthetic process involved in seed coat development2.65E-03
51GO:0045454: cell redox homeostasis2.91E-03
52GO:0006896: Golgi to vacuole transport2.95E-03
53GO:0006886: intracellular protein transport3.03E-03
54GO:0015706: nitrate transport3.57E-03
55GO:0000266: mitochondrial fission3.57E-03
56GO:0006096: glycolytic process3.59E-03
57GO:0009408: response to heat3.80E-03
58GO:0006807: nitrogen compound metabolic process3.89E-03
59GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process3.89E-03
60GO:0006006: glucose metabolic process3.89E-03
61GO:0006094: gluconeogenesis3.89E-03
62GO:0018105: peptidyl-serine phosphorylation4.44E-03
63GO:0046688: response to copper ion4.57E-03
64GO:0006979: response to oxidative stress4.60E-03
65GO:0000027: ribosomal large subunit assembly5.28E-03
66GO:0009863: salicylic acid mediated signaling pathway5.28E-03
67GO:0030150: protein import into mitochondrial matrix5.28E-03
68GO:0010187: negative regulation of seed germination5.28E-03
69GO:0006825: copper ion transport5.65E-03
70GO:0009814: defense response, incompatible interaction6.42E-03
71GO:0031348: negative regulation of defense response6.42E-03
72GO:0080092: regulation of pollen tube growth6.42E-03
73GO:0040008: regulation of growth7.09E-03
74GO:0010091: trichome branching7.23E-03
75GO:0051028: mRNA transport7.64E-03
76GO:0009789: positive regulation of abscisic acid-activated signaling pathway7.64E-03
77GO:0010501: RNA secondary structure unwinding8.07E-03
78GO:0006520: cellular amino acid metabolic process8.50E-03
79GO:0006662: glycerol ether metabolic process8.50E-03
80GO:0009617: response to bacterium8.86E-03
81GO:0006623: protein targeting to vacuole9.39E-03
82GO:0010183: pollen tube guidance9.39E-03
83GO:0010193: response to ozone9.85E-03
84GO:0032502: developmental process1.03E-02
85GO:0007264: small GTPase mediated signal transduction1.03E-02
86GO:0010286: heat acclimation1.18E-02
87GO:0009860: pollen tube growth1.24E-02
88GO:0009615: response to virus1.28E-02
89GO:0042128: nitrate assimilation1.38E-02
90GO:0015995: chlorophyll biosynthetic process1.43E-02
91GO:0016192: vesicle-mediated transport1.50E-02
92GO:0046777: protein autophosphorylation1.53E-02
93GO:0009867: jasmonic acid mediated signaling pathway1.82E-02
94GO:0045087: innate immune response1.82E-02
95GO:0034599: cellular response to oxidative stress1.88E-02
96GO:0006897: endocytosis2.06E-02
97GO:0006631: fatty acid metabolic process2.06E-02
98GO:0051707: response to other organism2.18E-02
99GO:0000209: protein polyubiquitination2.24E-02
100GO:0008152: metabolic process2.33E-02
101GO:0009965: leaf morphogenesis2.37E-02
102GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.50E-02
103GO:0009846: pollen germination2.57E-02
104GO:0006364: rRNA processing2.70E-02
105GO:0006486: protein glycosylation2.70E-02
106GO:0009909: regulation of flower development2.90E-02
107GO:0009734: auxin-activated signaling pathway2.98E-02
108GO:0009553: embryo sac development3.39E-02
109GO:0006468: protein phosphorylation3.54E-02
110GO:0009611: response to wounding3.83E-02
111GO:0035556: intracellular signal transduction3.95E-02
112GO:0051301: cell division4.08E-02
113GO:0009058: biosynthetic process4.22E-02
114GO:0009790: embryo development4.54E-02
115GO:0006457: protein folding4.83E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0008320: protein transmembrane transporter activity4.27E-05
3GO:0004325: ferrochelatase activity9.88E-05
4GO:0043141: ATP-dependent 5'-3' DNA helicase activity2.32E-04
5GO:0004634: phosphopyruvate hydratase activity2.32E-04
6GO:0004617: phosphoglycerate dehydrogenase activity2.32E-04
7GO:0003938: IMP dehydrogenase activity2.32E-04
8GO:0052692: raffinose alpha-galactosidase activity3.86E-04
9GO:0005093: Rab GDP-dissociation inhibitor activity3.86E-04
10GO:0016531: copper chaperone activity3.86E-04
11GO:0004557: alpha-galactosidase activity3.86E-04
12GO:0047134: protein-disulfide reductase activity5.38E-04
13GO:0004791: thioredoxin-disulfide reductase activity6.69E-04
14GO:0004345: glucose-6-phosphate dehydrogenase activity7.37E-04
15GO:0005509: calcium ion binding8.99E-04
16GO:0031593: polyubiquitin binding1.14E-03
17GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.14E-03
18GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.14E-03
19GO:1990714: hydroxyproline O-galactosyltransferase activity1.14E-03
20GO:0004332: fructose-bisphosphate aldolase activity1.14E-03
21GO:0009931: calcium-dependent protein serine/threonine kinase activity1.21E-03
22GO:0004683: calmodulin-dependent protein kinase activity1.27E-03
23GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.36E-03
24GO:0102391: decanoate--CoA ligase activity1.36E-03
25GO:0004012: phospholipid-translocating ATPase activity1.36E-03
26GO:0005096: GTPase activator activity1.47E-03
27GO:0000166: nucleotide binding1.56E-03
28GO:0004620: phospholipase activity1.59E-03
29GO:0004467: long-chain fatty acid-CoA ligase activity1.59E-03
30GO:0016831: carboxy-lyase activity1.59E-03
31GO:0008121: ubiquinol-cytochrome-c reductase activity1.59E-03
32GO:0008135: translation factor activity, RNA binding2.10E-03
33GO:0005524: ATP binding2.17E-03
34GO:0003678: DNA helicase activity2.37E-03
35GO:0005198: structural molecule activity2.54E-03
36GO:0047617: acyl-CoA hydrolase activity2.65E-03
37GO:0015112: nitrate transmembrane transporter activity2.65E-03
38GO:0005515: protein binding2.85E-03
39GO:0008794: arsenate reductase (glutaredoxin) activity3.25E-03
40GO:0008378: galactosyltransferase activity3.57E-03
41GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.89E-03
42GO:0031624: ubiquitin conjugating enzyme binding4.22E-03
43GO:0051082: unfolded protein binding4.31E-03
44GO:0015035: protein disulfide oxidoreductase activity4.44E-03
45GO:0004190: aspartic-type endopeptidase activity4.57E-03
46GO:0016758: transferase activity, transferring hexosyl groups5.24E-03
47GO:0030170: pyridoxal phosphate binding5.98E-03
48GO:0004298: threonine-type endopeptidase activity6.03E-03
49GO:0008194: UDP-glycosyltransferase activity8.31E-03
50GO:0008536: Ran GTPase binding8.50E-03
51GO:0042802: identical protein binding9.44E-03
52GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.08E-02
53GO:0000287: magnesium ion binding1.13E-02
54GO:0016597: amino acid binding1.23E-02
55GO:0005516: calmodulin binding1.32E-02
56GO:0004721: phosphoprotein phosphatase activity1.43E-02
57GO:0004004: ATP-dependent RNA helicase activity1.43E-02
58GO:0003746: translation elongation factor activity1.82E-02
59GO:0004712: protein serine/threonine/tyrosine kinase activity1.94E-02
60GO:0050661: NADP binding2.00E-02
61GO:0003924: GTPase activity2.11E-02
62GO:0051537: 2 iron, 2 sulfur cluster binding2.31E-02
63GO:0051287: NAD binding2.50E-02
64GO:0016491: oxidoreductase activity2.72E-02
65GO:0016298: lipase activity2.77E-02
66GO:0004672: protein kinase activity3.11E-02
67GO:0080043: quercetin 3-O-glucosyltransferase activity3.25E-02
68GO:0080044: quercetin 7-O-glucosyltransferase activity3.25E-02
69GO:0016887: ATPase activity3.27E-02
70GO:0022857: transmembrane transporter activity3.32E-02
71GO:0003779: actin binding3.39E-02
72GO:0008026: ATP-dependent helicase activity3.62E-02
73GO:0004386: helicase activity3.69E-02
74GO:0004674: protein serine/threonine kinase activity4.88E-02
75GO:0016787: hydrolase activity4.94E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0034455: t-UTP complex0.00E+00
3GO:0019034: viral replication complex0.00E+00
4GO:0005829: cytosol6.22E-08
5GO:0000015: phosphopyruvate hydratase complex2.32E-04
6GO:0030134: ER to Golgi transport vesicle2.32E-04
7GO:0005737: cytoplasm3.82E-04
8GO:0030658: transport vesicle membrane5.54E-04
9GO:0005886: plasma membrane8.64E-04
10GO:0005759: mitochondrial matrix9.16E-04
11GO:0005801: cis-Golgi network1.36E-03
12GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane1.59E-03
13GO:0019773: proteasome core complex, alpha-subunit complex2.10E-03
14GO:0048046: apoplast2.91E-03
15GO:0005740: mitochondrial envelope2.95E-03
16GO:0017119: Golgi transport complex2.95E-03
17GO:0000502: proteasome complex3.04E-03
18GO:0005802: trans-Golgi network3.19E-03
19GO:0008541: proteasome regulatory particle, lid subcomplex3.25E-03
20GO:0005750: mitochondrial respiratory chain complex III4.22E-03
21GO:0043234: protein complex4.92E-03
22GO:0009506: plasmodesma5.05E-03
23GO:0005758: mitochondrial intermembrane space5.28E-03
24GO:0009524: phragmoplast5.68E-03
25GO:0005741: mitochondrial outer membrane6.03E-03
26GO:0005839: proteasome core complex6.03E-03
27GO:0015629: actin cytoskeleton6.82E-03
28GO:0005744: mitochondrial inner membrane presequence translocase complex7.23E-03
29GO:0030136: clathrin-coated vesicle7.64E-03
30GO:0005789: endoplasmic reticulum membrane8.65E-03
31GO:0005730: nucleolus1.01E-02
32GO:0005794: Golgi apparatus1.02E-02
33GO:0032580: Golgi cisterna membrane1.13E-02
34GO:0016020: membrane1.25E-02
35GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.26E-02
36GO:0000932: P-body1.28E-02
37GO:0005874: microtubule1.38E-02
38GO:0000151: ubiquitin ligase complex1.54E-02
39GO:0005643: nuclear pore1.54E-02
40GO:0019005: SCF ubiquitin ligase complex1.54E-02
41GO:0005768: endosome1.68E-02
42GO:0005819: spindle1.94E-02
43GO:0009536: plastid2.49E-02
44GO:0000139: Golgi membrane2.81E-02
45GO:0005635: nuclear envelope2.83E-02
46GO:0005783: endoplasmic reticulum2.99E-02
47GO:0005834: heterotrimeric G-protein complex3.18E-02
48GO:0005618: cell wall3.58E-02
49GO:0010287: plastoglobule3.92E-02
50GO:0005623: cell4.15E-02
51GO:0005777: peroxisome4.29E-02
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Gene type



Gene DE type