GO Enrichment Analysis of Co-expressed Genes with
AT5G18850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 7 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.17E-09 |
| 8 | GO:0009853: photorespiration | 1.72E-08 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.51E-06 |
| 10 | GO:0009902: chloroplast relocation | 2.92E-06 |
| 11 | GO:0071482: cellular response to light stimulus | 2.60E-05 |
| 12 | GO:0009443: pyridoxal 5'-phosphate salvage | 5.18E-05 |
| 13 | GO:0000023: maltose metabolic process | 5.18E-05 |
| 14 | GO:0010362: negative regulation of anion channel activity by blue light | 5.18E-05 |
| 15 | GO:0009658: chloroplast organization | 5.66E-05 |
| 16 | GO:0019684: photosynthesis, light reaction | 5.75E-05 |
| 17 | GO:0009767: photosynthetic electron transport chain | 7.84E-05 |
| 18 | GO:0005986: sucrose biosynthetic process | 7.84E-05 |
| 19 | GO:0019253: reductive pentose-phosphate cycle | 9.00E-05 |
| 20 | GO:0009629: response to gravity | 1.27E-04 |
| 21 | GO:0007154: cell communication | 1.27E-04 |
| 22 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.27E-04 |
| 23 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.27E-04 |
| 24 | GO:0045910: negative regulation of DNA recombination | 2.17E-04 |
| 25 | GO:0000913: preprophase band assembly | 2.17E-04 |
| 26 | GO:0031022: nuclear migration along microfilament | 2.17E-04 |
| 27 | GO:0006000: fructose metabolic process | 2.17E-04 |
| 28 | GO:0016117: carotenoid biosynthetic process | 2.31E-04 |
| 29 | GO:2001141: regulation of RNA biosynthetic process | 3.17E-04 |
| 30 | GO:0006546: glycine catabolic process | 4.24E-04 |
| 31 | GO:0006810: transport | 4.43E-04 |
| 32 | GO:0016120: carotene biosynthetic process | 5.39E-04 |
| 33 | GO:0006544: glycine metabolic process | 5.39E-04 |
| 34 | GO:0043097: pyrimidine nucleoside salvage | 5.39E-04 |
| 35 | GO:0009904: chloroplast accumulation movement | 5.39E-04 |
| 36 | GO:0010236: plastoquinone biosynthetic process | 5.39E-04 |
| 37 | GO:0009107: lipoate biosynthetic process | 5.39E-04 |
| 38 | GO:0016123: xanthophyll biosynthetic process | 5.39E-04 |
| 39 | GO:0006206: pyrimidine nucleobase metabolic process | 6.60E-04 |
| 40 | GO:0006563: L-serine metabolic process | 6.60E-04 |
| 41 | GO:0042026: protein refolding | 7.87E-04 |
| 42 | GO:0006458: 'de novo' protein folding | 7.87E-04 |
| 43 | GO:0009903: chloroplast avoidance movement | 7.87E-04 |
| 44 | GO:0009854: oxidative photosynthetic carbon pathway | 7.87E-04 |
| 45 | GO:0009704: de-etiolation | 1.06E-03 |
| 46 | GO:0016559: peroxisome fission | 1.06E-03 |
| 47 | GO:0048564: photosystem I assembly | 1.06E-03 |
| 48 | GO:0009657: plastid organization | 1.20E-03 |
| 49 | GO:0006002: fructose 6-phosphate metabolic process | 1.20E-03 |
| 50 | GO:0009821: alkaloid biosynthetic process | 1.35E-03 |
| 51 | GO:0009638: phototropism | 1.50E-03 |
| 52 | GO:0035999: tetrahydrofolate interconversion | 1.50E-03 |
| 53 | GO:0055114: oxidation-reduction process | 1.57E-03 |
| 54 | GO:0006298: mismatch repair | 1.67E-03 |
| 55 | GO:0006415: translational termination | 1.84E-03 |
| 56 | GO:0006352: DNA-templated transcription, initiation | 1.84E-03 |
| 57 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 58 | GO:0009773: photosynthetic electron transport in photosystem I | 1.84E-03 |
| 59 | GO:0005983: starch catabolic process | 2.01E-03 |
| 60 | GO:0006094: gluconeogenesis | 2.19E-03 |
| 61 | GO:0009735: response to cytokinin | 2.37E-03 |
| 62 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 63 | GO:0046686: response to cadmium ion | 2.41E-03 |
| 64 | GO:0009058: biosynthetic process | 2.45E-03 |
| 65 | GO:0090351: seedling development | 2.56E-03 |
| 66 | GO:0007031: peroxisome organization | 2.56E-03 |
| 67 | GO:0042343: indole glucosinolate metabolic process | 2.56E-03 |
| 68 | GO:0006289: nucleotide-excision repair | 2.96E-03 |
| 69 | GO:0016575: histone deacetylation | 3.16E-03 |
| 70 | GO:0007623: circadian rhythm | 3.19E-03 |
| 71 | GO:0098542: defense response to other organism | 3.37E-03 |
| 72 | GO:0061077: chaperone-mediated protein folding | 3.37E-03 |
| 73 | GO:0006730: one-carbon metabolic process | 3.59E-03 |
| 74 | GO:0016226: iron-sulfur cluster assembly | 3.59E-03 |
| 75 | GO:0070417: cellular response to cold | 4.26E-03 |
| 76 | GO:0010118: stomatal movement | 4.49E-03 |
| 77 | GO:0042631: cellular response to water deprivation | 4.49E-03 |
| 78 | GO:0007018: microtubule-based movement | 4.96E-03 |
| 79 | GO:0019252: starch biosynthetic process | 5.21E-03 |
| 80 | GO:0009791: post-embryonic development | 5.21E-03 |
| 81 | GO:0016032: viral process | 5.71E-03 |
| 82 | GO:0000910: cytokinesis | 6.76E-03 |
| 83 | GO:0018298: protein-chromophore linkage | 8.46E-03 |
| 84 | GO:0009817: defense response to fungus, incompatible interaction | 8.46E-03 |
| 85 | GO:0000160: phosphorelay signal transduction system | 8.76E-03 |
| 86 | GO:0009631: cold acclimation | 9.36E-03 |
| 87 | GO:0016051: carbohydrate biosynthetic process | 9.99E-03 |
| 88 | GO:0009637: response to blue light | 9.99E-03 |
| 89 | GO:0005975: carbohydrate metabolic process | 1.10E-02 |
| 90 | GO:0006417: regulation of translation | 1.58E-02 |
| 91 | GO:0009626: plant-type hypersensitive response | 1.74E-02 |
| 92 | GO:0009624: response to nematode | 1.89E-02 |
| 93 | GO:0006396: RNA processing | 1.93E-02 |
| 94 | GO:0009845: seed germination | 2.35E-02 |
| 95 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 96 | GO:0009409: response to cold | 4.37E-02 |
| 97 | GO:0080167: response to karrikin | 4.44E-02 |
| 98 | GO:0046777: protein autophosphorylation | 4.66E-02 |
| 99 | GO:0044550: secondary metabolite biosynthetic process | 4.71E-02 |
| 100 | GO:0015979: photosynthesis | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 2 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 3 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 4 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 8 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 9 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 10 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 11 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 12 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 13 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 14 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.51E-06 |
| 15 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.92E-06 |
| 16 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.10E-05 |
| 17 | GO:0004033: aldo-keto reductase (NADP) activity | 2.02E-05 |
| 18 | GO:0008266: poly(U) RNA binding | 9.00E-05 |
| 19 | GO:0030385: ferredoxin:thioredoxin reductase activity | 1.27E-04 |
| 20 | GO:0010291: carotene beta-ring hydroxylase activity | 1.27E-04 |
| 21 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.27E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.27E-04 |
| 23 | GO:0032947: protein complex scaffold | 2.17E-04 |
| 24 | GO:0050307: sucrose-phosphate phosphatase activity | 2.17E-04 |
| 25 | GO:0070402: NADPH binding | 2.17E-04 |
| 26 | GO:0016992: lipoate synthase activity | 2.17E-04 |
| 27 | GO:0048487: beta-tubulin binding | 3.17E-04 |
| 28 | GO:0016149: translation release factor activity, codon specific | 3.17E-04 |
| 29 | GO:0009882: blue light photoreceptor activity | 3.17E-04 |
| 30 | GO:0048038: quinone binding | 3.35E-04 |
| 31 | GO:0001053: plastid sigma factor activity | 4.24E-04 |
| 32 | GO:0008453: alanine-glyoxylate transaminase activity | 4.24E-04 |
| 33 | GO:0016987: sigma factor activity | 4.24E-04 |
| 34 | GO:0004372: glycine hydroxymethyltransferase activity | 5.39E-04 |
| 35 | GO:0042578: phosphoric ester hydrolase activity | 6.60E-04 |
| 36 | GO:0030983: mismatched DNA binding | 6.60E-04 |
| 37 | GO:0080030: methyl indole-3-acetate esterase activity | 6.60E-04 |
| 38 | GO:0004849: uridine kinase activity | 7.87E-04 |
| 39 | GO:0005198: structural molecule activity | 1.11E-03 |
| 40 | GO:0008135: translation factor activity, RNA binding | 1.20E-03 |
| 41 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.20E-03 |
| 42 | GO:0003747: translation release factor activity | 1.35E-03 |
| 43 | GO:0016844: strictosidine synthase activity | 1.50E-03 |
| 44 | GO:0044183: protein binding involved in protein folding | 1.84E-03 |
| 45 | GO:0051082: unfolded protein binding | 1.86E-03 |
| 46 | GO:0031072: heat shock protein binding | 2.19E-03 |
| 47 | GO:0000155: phosphorelay sensor kinase activity | 2.19E-03 |
| 48 | GO:0051536: iron-sulfur cluster binding | 2.96E-03 |
| 49 | GO:0004407: histone deacetylase activity | 2.96E-03 |
| 50 | GO:0005528: FK506 binding | 2.96E-03 |
| 51 | GO:0003756: protein disulfide isomerase activity | 4.03E-03 |
| 52 | GO:0042802: identical protein binding | 4.04E-03 |
| 53 | GO:0010181: FMN binding | 4.96E-03 |
| 54 | GO:0016788: hydrolase activity, acting on ester bonds | 5.00E-03 |
| 55 | GO:0004518: nuclease activity | 5.71E-03 |
| 56 | GO:0003684: damaged DNA binding | 6.23E-03 |
| 57 | GO:0005506: iron ion binding | 6.35E-03 |
| 58 | GO:0004222: metalloendopeptidase activity | 9.06E-03 |
| 59 | GO:0003746: translation elongation factor activity | 9.99E-03 |
| 60 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.09E-02 |
| 61 | GO:0043621: protein self-association | 1.26E-02 |
| 62 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.33E-02 |
| 63 | GO:0051287: NAD binding | 1.37E-02 |
| 64 | GO:0016887: ATPase activity | 1.39E-02 |
| 65 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.47E-02 |
| 66 | GO:0003777: microtubule motor activity | 1.58E-02 |
| 67 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.26E-02 |
| 68 | GO:0019825: oxygen binding | 2.28E-02 |
| 69 | GO:0030170: pyridoxal phosphate binding | 2.39E-02 |
| 70 | GO:0008017: microtubule binding | 2.88E-02 |
| 71 | GO:0005509: calcium ion binding | 2.99E-02 |
| 72 | GO:0008168: methyltransferase activity | 3.71E-02 |
| 73 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 74 | GO:0005515: protein binding | 3.90E-02 |
| 75 | GO:0016491: oxidoreductase activity | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.17E-25 |
| 4 | GO:0009941: chloroplast envelope | 1.09E-11 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.89E-10 |
| 6 | GO:0009570: chloroplast stroma | 1.31E-09 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.32E-08 |
| 8 | GO:0009534: chloroplast thylakoid | 1.56E-08 |
| 9 | GO:0005960: glycine cleavage complex | 1.51E-06 |
| 10 | GO:0030095: chloroplast photosystem II | 9.00E-05 |
| 11 | GO:0048046: apoplast | 1.02E-04 |
| 12 | GO:0031357: integral component of chloroplast inner membrane | 1.27E-04 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 1.45E-04 |
| 14 | GO:0009509: chromoplast | 2.17E-04 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 2.30E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 3.13E-04 |
| 17 | GO:0010319: stromule | 4.31E-04 |
| 18 | GO:0009840: chloroplastic endopeptidase Clp complex | 7.87E-04 |
| 19 | GO:0005779: integral component of peroxisomal membrane | 1.20E-03 |
| 20 | GO:0009706: chloroplast inner membrane | 1.86E-03 |
| 21 | GO:0009508: plastid chromosome | 2.19E-03 |
| 22 | GO:0005623: cell | 2.38E-03 |
| 23 | GO:0005759: mitochondrial matrix | 2.90E-03 |
| 24 | GO:0005777: peroxisome | 3.16E-03 |
| 25 | GO:0009579: thylakoid | 3.33E-03 |
| 26 | GO:0005871: kinesin complex | 4.26E-03 |
| 27 | GO:0009504: cell plate | 5.21E-03 |
| 28 | GO:0005694: chromosome | 5.71E-03 |
| 29 | GO:0009295: nucleoid | 6.49E-03 |
| 30 | GO:0005778: peroxisomal membrane | 6.49E-03 |
| 31 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 32 | GO:0005819: spindle | 1.06E-02 |
| 33 | GO:0016020: membrane | 1.64E-02 |
| 34 | GO:0010287: plastoglobule | 2.14E-02 |
| 35 | GO:0009524: phragmoplast | 2.31E-02 |
| 36 | GO:0005874: microtubule | 4.33E-02 |
| 37 | GO:0031969: chloroplast membrane | 4.44E-02 |