GO Enrichment Analysis of Co-expressed Genes with
AT5G18570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010027: thylakoid membrane organization | 1.22E-06 |
| 2 | GO:0090391: granum assembly | 1.31E-06 |
| 3 | GO:0010196: nonphotochemical quenching | 3.00E-05 |
| 4 | GO:0043686: co-translational protein modification | 7.90E-05 |
| 5 | GO:0005991: trehalose metabolic process | 7.90E-05 |
| 6 | GO:0071588: hydrogen peroxide mediated signaling pathway | 7.90E-05 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 1.08E-04 |
| 8 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.89E-04 |
| 9 | GO:0010289: homogalacturonan biosynthetic process | 1.89E-04 |
| 10 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.89E-04 |
| 11 | GO:0015675: nickel cation transport | 3.17E-04 |
| 12 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.17E-04 |
| 13 | GO:0051604: protein maturation | 3.17E-04 |
| 14 | GO:0010239: chloroplast mRNA processing | 4.58E-04 |
| 15 | GO:0010021: amylopectin biosynthetic process | 6.09E-04 |
| 16 | GO:0031365: N-terminal protein amino acid modification | 7.72E-04 |
| 17 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.72E-04 |
| 18 | GO:0016554: cytidine to uridine editing | 9.42E-04 |
| 19 | GO:0006655: phosphatidylglycerol biosynthetic process | 9.42E-04 |
| 20 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 9.42E-04 |
| 21 | GO:0015995: chlorophyll biosynthetic process | 9.59E-04 |
| 22 | GO:0010019: chloroplast-nucleus signaling pathway | 1.12E-03 |
| 23 | GO:1901259: chloroplast rRNA processing | 1.12E-03 |
| 24 | GO:0009395: phospholipid catabolic process | 1.31E-03 |
| 25 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.31E-03 |
| 26 | GO:0016559: peroxisome fission | 1.51E-03 |
| 27 | GO:0008610: lipid biosynthetic process | 1.51E-03 |
| 28 | GO:0006353: DNA-templated transcription, termination | 1.51E-03 |
| 29 | GO:0070413: trehalose metabolism in response to stress | 1.51E-03 |
| 30 | GO:0006605: protein targeting | 1.51E-03 |
| 31 | GO:1900865: chloroplast RNA modification | 2.18E-03 |
| 32 | GO:0006949: syncytium formation | 2.41E-03 |
| 33 | GO:0006629: lipid metabolic process | 2.61E-03 |
| 34 | GO:0071555: cell wall organization | 2.89E-03 |
| 35 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.92E-03 |
| 36 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.18E-03 |
| 37 | GO:0010020: chloroplast fission | 3.45E-03 |
| 38 | GO:0010207: photosystem II assembly | 3.45E-03 |
| 39 | GO:0005992: trehalose biosynthetic process | 4.31E-03 |
| 40 | GO:0019953: sexual reproduction | 4.61E-03 |
| 41 | GO:0007017: microtubule-based process | 4.61E-03 |
| 42 | GO:0009695: jasmonic acid biosynthetic process | 4.61E-03 |
| 43 | GO:0031408: oxylipin biosynthetic process | 4.92E-03 |
| 44 | GO:0016998: cell wall macromolecule catabolic process | 4.92E-03 |
| 45 | GO:0006810: transport | 5.18E-03 |
| 46 | GO:0030245: cellulose catabolic process | 5.24E-03 |
| 47 | GO:0005975: carbohydrate metabolic process | 5.44E-03 |
| 48 | GO:0009306: protein secretion | 5.89E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 6.57E-03 |
| 50 | GO:0010182: sugar mediated signaling pathway | 6.92E-03 |
| 51 | GO:0019252: starch biosynthetic process | 7.64E-03 |
| 52 | GO:0000302: response to reactive oxygen species | 8.01E-03 |
| 53 | GO:0010583: response to cyclopentenone | 8.39E-03 |
| 54 | GO:0009828: plant-type cell wall loosening | 9.16E-03 |
| 55 | GO:0042128: nitrate assimilation | 1.12E-02 |
| 56 | GO:0010411: xyloglucan metabolic process | 1.16E-02 |
| 57 | GO:0009832: plant-type cell wall biogenesis | 1.29E-02 |
| 58 | GO:0009631: cold acclimation | 1.38E-02 |
| 59 | GO:0016051: carbohydrate biosynthetic process | 1.48E-02 |
| 60 | GO:0034599: cellular response to oxidative stress | 1.52E-02 |
| 61 | GO:0008152: metabolic process | 1.73E-02 |
| 62 | GO:0042546: cell wall biogenesis | 1.82E-02 |
| 63 | GO:0009664: plant-type cell wall organization | 2.08E-02 |
| 64 | GO:0006857: oligopeptide transport | 2.29E-02 |
| 65 | GO:0006096: glycolytic process | 2.46E-02 |
| 66 | GO:0009742: brassinosteroid mediated signaling pathway | 2.93E-02 |
| 67 | GO:0051301: cell division | 3.04E-02 |
| 68 | GO:0045893: positive regulation of transcription, DNA-templated | 3.20E-02 |
| 69 | GO:0006457: protein folding | 3.61E-02 |
| 70 | GO:0042744: hydrogen peroxide catabolic process | 3.62E-02 |
| 71 | GO:0009790: embryo development | 3.68E-02 |
| 72 | GO:0007623: circadian rhythm | 4.14E-02 |
| 73 | GO:0007166: cell surface receptor signaling pathway | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 4 | GO:0050139: nicotinate-N-glucosyltransferase activity | 7.90E-05 |
| 5 | GO:0042586: peptide deformylase activity | 7.90E-05 |
| 6 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 7.90E-05 |
| 7 | GO:0004321: fatty-acyl-CoA synthase activity | 7.90E-05 |
| 8 | GO:0005080: protein kinase C binding | 7.90E-05 |
| 9 | GO:0033201: alpha-1,4-glucan synthase activity | 1.89E-04 |
| 10 | GO:0015099: nickel cation transmembrane transporter activity | 1.89E-04 |
| 11 | GO:0004373: glycogen (starch) synthase activity | 3.17E-04 |
| 12 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 4.58E-04 |
| 13 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 4.58E-04 |
| 14 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 6.09E-04 |
| 15 | GO:0080032: methyl jasmonate esterase activity | 6.09E-04 |
| 16 | GO:0009011: starch synthase activity | 6.09E-04 |
| 17 | GO:0080030: methyl indole-3-acetate esterase activity | 9.42E-04 |
| 18 | GO:0004130: cytochrome-c peroxidase activity | 9.42E-04 |
| 19 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 9.42E-04 |
| 20 | GO:0016688: L-ascorbate peroxidase activity | 9.42E-04 |
| 21 | GO:0016788: hydrolase activity, acting on ester bonds | 1.25E-03 |
| 22 | GO:0004620: phospholipase activity | 1.31E-03 |
| 23 | GO:0008312: 7S RNA binding | 1.51E-03 |
| 24 | GO:0004033: aldo-keto reductase (NADP) activity | 1.51E-03 |
| 25 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.51E-03 |
| 26 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.95E-03 |
| 27 | GO:0016207: 4-coumarate-CoA ligase activity | 1.95E-03 |
| 28 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.97E-03 |
| 29 | GO:0003924: GTPase activity | 2.61E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 2.66E-03 |
| 31 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.94E-03 |
| 32 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.94E-03 |
| 33 | GO:0031072: heat shock protein binding | 3.18E-03 |
| 34 | GO:0004565: beta-galactosidase activity | 3.18E-03 |
| 35 | GO:0008081: phosphoric diester hydrolase activity | 3.18E-03 |
| 36 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.45E-03 |
| 37 | GO:0019843: rRNA binding | 4.02E-03 |
| 38 | GO:0043424: protein histidine kinase binding | 4.61E-03 |
| 39 | GO:0004176: ATP-dependent peptidase activity | 4.92E-03 |
| 40 | GO:0016757: transferase activity, transferring glycosyl groups | 5.19E-03 |
| 41 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 5.24E-03 |
| 42 | GO:0008810: cellulase activity | 5.56E-03 |
| 43 | GO:0008194: UDP-glycosyltransferase activity | 6.18E-03 |
| 44 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.01E-03 |
| 45 | GO:0016791: phosphatase activity | 9.16E-03 |
| 46 | GO:0008237: metallopeptidase activity | 9.56E-03 |
| 47 | GO:0005200: structural constituent of cytoskeleton | 9.56E-03 |
| 48 | GO:0005525: GTP binding | 1.01E-02 |
| 49 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.16E-02 |
| 50 | GO:0008236: serine-type peptidase activity | 1.21E-02 |
| 51 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.25E-02 |
| 52 | GO:0005215: transporter activity | 1.50E-02 |
| 53 | GO:0003993: acid phosphatase activity | 1.52E-02 |
| 54 | GO:0043621: protein self-association | 1.87E-02 |
| 55 | GO:0015293: symporter activity | 1.92E-02 |
| 56 | GO:0008289: lipid binding | 2.19E-02 |
| 57 | GO:0016874: ligase activity | 2.69E-02 |
| 58 | GO:0051082: unfolded protein binding | 2.81E-02 |
| 59 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.94E-02 |
| 60 | GO:0008017: microtubule binding | 4.28E-02 |
| 61 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.91E-02 |
| 62 | GO:0042802: identical protein binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.39E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.66E-11 |
| 4 | GO:0009534: chloroplast thylakoid | 8.04E-09 |
| 5 | GO:0009570: chloroplast stroma | 3.25E-06 |
| 6 | GO:0009941: chloroplast envelope | 5.56E-06 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.25E-05 |
| 8 | GO:0046658: anchored component of plasma membrane | 1.18E-04 |
| 9 | GO:0031977: thylakoid lumen | 1.31E-04 |
| 10 | GO:0080085: signal recognition particle, chloroplast targeting | 1.89E-04 |
| 11 | GO:0009579: thylakoid | 2.33E-04 |
| 12 | GO:0015630: microtubule cytoskeleton | 4.58E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 4.76E-04 |
| 14 | GO:0009526: plastid envelope | 6.09E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 7.72E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.31E-03 |
| 17 | GO:0009501: amyloplast | 1.51E-03 |
| 18 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.72E-03 |
| 19 | GO:0005618: cell wall | 1.90E-03 |
| 20 | GO:0016021: integral component of membrane | 2.44E-03 |
| 21 | GO:0005578: proteinaceous extracellular matrix | 3.18E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 4.61E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 7.64E-03 |
| 24 | GO:0009707: chloroplast outer membrane | 1.25E-02 |
| 25 | GO:0005886: plasma membrane | 1.28E-02 |
| 26 | GO:0015934: large ribosomal subunit | 1.38E-02 |
| 27 | GO:0043231: intracellular membrane-bounded organelle | 1.73E-02 |
| 28 | GO:0048046: apoplast | 2.03E-02 |
| 29 | GO:0005777: peroxisome | 3.20E-02 |
| 30 | GO:0031225: anchored component of membrane | 4.34E-02 |