co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G18100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098586: cellular response to virus	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
4	GO:0010027: thylakoid membrane organization	2.69E-07
5	GO:1904966: positive regulation of vitamin E biosynthetic process	4.74E-05
6	GO:1904964: positive regulation of phytol biosynthetic process	4.74E-05
7	GO:0065002: intracellular protein transmembrane transport	4.74E-05
8	GO:0043953: protein transport by the Tat complex	4.74E-05
9	GO:0009773: photosynthetic electron transport in photosystem I	5.03E-05
10	GO:0080005: photosystem stoichiometry adjustment	1.17E-04
11	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.17E-04
12	GO:0046741: transport of virus in host, tissue to tissue	1.17E-04
13	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.17E-04
14	GO:0051604: protein maturation	2.00E-04
15	GO:0016050: vesicle organization	2.00E-04
16	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.00E-04
17	GO:0043572: plastid fission	2.94E-04
18	GO:0009152: purine ribonucleotide biosynthetic process	2.94E-04
19	GO:0046653: tetrahydrofolate metabolic process	2.94E-04
20	GO:0009765: photosynthesis, light harvesting	3.94E-04
21	GO:0006109: regulation of carbohydrate metabolic process	3.94E-04
22	GO:0045038: protein import into chloroplast thylakoid membrane	5.00E-04
23	GO:0010190: cytochrome b6f complex assembly	6.13E-04
24	GO:0010304: PSII associated light-harvesting complex II catabolic process	6.13E-04
25	GO:0042549: photosystem II stabilization	6.13E-04
26	GO:0000470: maturation of LSU-rRNA	6.13E-04
27	GO:0015979: photosynthesis	8.18E-04
28	GO:0006400: tRNA modification	8.54E-04
29	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	8.54E-04
30	GO:0009642: response to light intensity	9.81E-04
31	GO:0032544: plastid translation	1.11E-03
32	GO:0015996: chlorophyll catabolic process	1.11E-03
33	GO:0000373: Group II intron splicing	1.25E-03
34	GO:0006098: pentose-phosphate shunt	1.25E-03
35	GO:0043085: positive regulation of catalytic activity	1.70E-03
36	GO:0010628: positive regulation of gene expression	2.03E-03
37	GO:0006094: gluconeogenesis	2.03E-03
38	GO:0010020: chloroplast fission	2.20E-03
39	GO:0009451: RNA modification	2.91E-03
40	GO:0051302: regulation of cell division	2.93E-03
41	GO:0007017: microtubule-based process	2.93E-03
42	GO:0016226: iron-sulfur cluster assembly	3.32E-03
43	GO:0009561: megagametogenesis	3.73E-03
44	GO:0000413: protein peptidyl-prolyl isomerization	4.15E-03
45	GO:0006662: glycerol ether metabolic process	4.37E-03
46	GO:0000302: response to reactive oxygen species	5.04E-03
47	GO:0009567: double fertilization forming a zygote and endosperm	5.75E-03
48	GO:0001666: response to hypoxia	6.50E-03
49	GO:0018298: protein-chromophore linkage	7.81E-03
50	GO:0009853: photorespiration	9.22E-03
51	GO:0034599: cellular response to oxidative stress	9.51E-03
52	GO:0006364: rRNA processing	1.36E-02
53	GO:0006096: glycolytic process	1.53E-02
54	GO:0043086: negative regulation of catalytic activity	1.53E-02
55	GO:0009058: biosynthetic process	2.13E-02
56	GO:0006413: translational initiation	2.45E-02
57	GO:0010468: regulation of gene expression	2.92E-02
58	GO:0042254: ribosome biogenesis	3.56E-02
59	GO:0007049: cell cycle	3.80E-02
60	GO:0006810: transport	4.23E-02
61	GO:0046777: protein autophosphorylation	4.30E-02
62	GO:0045454: cell redox homeostasis	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0005048: signal sequence binding	0.00E+00
3	GO:0034256: chlorophyll(ide) b reductase activity	4.74E-05
4	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.17E-04
5	GO:0004047: aminomethyltransferase activity	1.17E-04
6	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	2.00E-04
7	GO:0008864: formyltetrahydrofolate deformylase activity	2.00E-04
8	GO:0043495: protein anchor	3.94E-04
9	GO:0004332: fructose-bisphosphate aldolase activity	6.13E-04
10	GO:0019899: enzyme binding	8.54E-04
11	GO:0043022: ribosome binding	9.81E-04
12	GO:0008312: 7S RNA binding	9.81E-04
13	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.03E-03
14	GO:0008047: enzyme activator activity	1.55E-03
15	GO:0031072: heat shock protein binding	2.03E-03
16	GO:0019843: rRNA binding	2.07E-03
17	GO:0004857: enzyme inhibitor activity	2.74E-03
18	GO:0005528: FK506 binding	2.74E-03
19	GO:0043424: protein histidine kinase binding	2.93E-03
20	GO:0004176: ATP-dependent peptidase activity	3.12E-03
21	GO:0022891: substrate-specific transmembrane transporter activity	3.52E-03
22	GO:0047134: protein-disulfide reductase activity	3.93E-03
23	GO:0004791: thioredoxin-disulfide reductase activity	4.59E-03
24	GO:0008233: peptidase activity	5.33E-03
25	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.52E-03
26	GO:0016168: chlorophyll binding	6.75E-03
27	GO:0008236: serine-type peptidase activity	7.54E-03
28	GO:0004519: endonuclease activity	8.69E-03
29	GO:0003777: microtubule motor activity	1.46E-02
30	GO:0016874: ligase activity	1.67E-02
31	GO:0051082: unfolded protein binding	1.75E-02
32	GO:0015035: protein disulfide oxidoreductase activity	1.78E-02
33	GO:0016829: lyase activity	2.16E-02
34	GO:0003723: RNA binding	2.30E-02
35	GO:0003743: translation initiation factor activity	2.88E-02
36	GO:0042802: identical protein binding	3.05E-02
37	GO:0008168: methyltransferase activity	3.42E-02

Rank	GO Term	Adjusted P value
1	GO:0043235: receptor complex	0.00E+00
2	GO:0009575: chromoplast stroma	0.00E+00
3	GO:0009507: chloroplast	2.04E-27
4	GO:0009535: chloroplast thylakoid membrane	3.54E-20
5	GO:0009534: chloroplast thylakoid	3.55E-10
6	GO:0009570: chloroplast stroma	6.17E-10
7	GO:0009579: thylakoid	2.18E-07
8	GO:0009543: chloroplast thylakoid lumen	2.82E-07
9	GO:0031361: integral component of thylakoid membrane	4.74E-05
10	GO:0031977: thylakoid lumen	4.82E-05
11	GO:0080085: signal recognition particle, chloroplast targeting	1.17E-04
12	GO:0042651: thylakoid membrane	1.28E-04
13	GO:0009941: chloroplast envelope	1.46E-04
14	GO:0033281: TAT protein transport complex	2.00E-04
15	GO:0009526: plastid envelope	3.94E-04
16	GO:0030286: dynein complex	3.94E-04
17	GO:0055035: plastid thylakoid membrane	5.00E-04
18	GO:0009533: chloroplast stromal thylakoid	8.54E-04
19	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.11E-03
20	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.25E-03
21	GO:0009508: plastid chromosome	2.03E-03
22	GO:0005875: microtubule associated complex	2.56E-03
23	GO:0009654: photosystem II oxygen evolving complex	2.93E-03
24	GO:0009523: photosystem II	4.81E-03
25	GO:0019898: extrinsic component of membrane	4.81E-03
26	GO:0005840: ribosome	5.94E-03
27	GO:0009295: nucleoid	6.00E-03
28	GO:0030529: intracellular ribonucleoprotein complex	6.50E-03
29	GO:0009707: chloroplast outer membrane	7.81E-03
30	GO:0015934: large ribosomal subunit	8.65E-03
31	GO:0043231: intracellular membrane-bounded organelle	8.81E-03
32	GO:0009706: chloroplast inner membrane	1.75E-02
33	GO:0010287: plastoglobule	1.97E-02
34	GO:0005623: cell	2.09E-02
35	GO:0022625: cytosolic large ribosomal subunit	4.24E-02