Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G17990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0070212: protein poly-ADP-ribosylation0.00E+00
5GO:0045792: negative regulation of cell size0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0019428: allantoin biosynthetic process0.00E+00
8GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
9GO:0006721: terpenoid metabolic process0.00E+00
10GO:0009617: response to bacterium3.74E-13
11GO:0009626: plant-type hypersensitive response9.15E-08
12GO:0080142: regulation of salicylic acid biosynthetic process2.33E-07
13GO:0009751: response to salicylic acid2.38E-07
14GO:0042742: defense response to bacterium7.89E-07
15GO:0009816: defense response to bacterium, incompatible interaction1.41E-06
16GO:0080151: positive regulation of salicylic acid mediated signaling pathway2.65E-06
17GO:0031349: positive regulation of defense response2.65E-06
18GO:0006952: defense response4.06E-06
19GO:0006979: response to oxidative stress6.46E-06
20GO:0010112: regulation of systemic acquired resistance9.06E-06
21GO:0010200: response to chitin9.76E-06
22GO:0072334: UDP-galactose transmembrane transport2.19E-05
23GO:0009627: systemic acquired resistance3.79E-05
24GO:0002237: response to molecule of bacterial origin3.98E-05
25GO:0006465: signal peptide processing6.36E-05
26GO:0009697: salicylic acid biosynthetic process6.36E-05
27GO:0009863: salicylic acid mediated signaling pathway6.71E-05
28GO:0010942: positive regulation of cell death9.33E-05
29GO:0031348: negative regulation of defense response1.04E-04
30GO:0051707: response to other organism1.28E-04
31GO:0010150: leaf senescence1.39E-04
32GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.16E-04
33GO:0010224: response to UV-B2.27E-04
34GO:0019276: UDP-N-acetylgalactosamine metabolic process2.39E-04
35GO:0006436: tryptophanyl-tRNA aminoacylation2.39E-04
36GO:0001560: regulation of cell growth by extracellular stimulus2.39E-04
37GO:0019628: urate catabolic process2.39E-04
38GO:0006047: UDP-N-acetylglucosamine metabolic process2.39E-04
39GO:0016487: farnesol metabolic process2.39E-04
40GO:0051245: negative regulation of cellular defense response2.39E-04
41GO:0009609: response to symbiotic bacterium2.39E-04
42GO:1901183: positive regulation of camalexin biosynthetic process2.39E-04
43GO:0009700: indole phytoalexin biosynthetic process2.39E-04
44GO:0050691: regulation of defense response to virus by host2.39E-04
45GO:0010230: alternative respiration2.39E-04
46GO:0060862: negative regulation of floral organ abscission2.39E-04
47GO:0046244: salicylic acid catabolic process2.39E-04
48GO:0006144: purine nucleobase metabolic process2.39E-04
49GO:2000031: regulation of salicylic acid mediated signaling pathway2.67E-04
50GO:0010120: camalexin biosynthetic process2.67E-04
51GO:0030968: endoplasmic reticulum unfolded protein response2.67E-04
52GO:0015780: nucleotide-sugar transport3.23E-04
53GO:1900426: positive regulation of defense response to bacterium3.83E-04
54GO:0006032: chitin catabolic process4.48E-04
55GO:0080167: response to karrikin4.87E-04
56GO:0031204: posttranslational protein targeting to membrane, translocation5.29E-04
57GO:0010618: aerenchyma formation5.29E-04
58GO:0015865: purine nucleotide transport5.29E-04
59GO:0006468: protein phosphorylation7.56E-04
60GO:0072661: protein targeting to plasma membrane8.60E-04
61GO:0006011: UDP-glucose metabolic process8.60E-04
62GO:0048281: inflorescence morphogenesis8.60E-04
63GO:0006048: UDP-N-acetylglucosamine biosynthetic process8.60E-04
64GO:0010581: regulation of starch biosynthetic process8.60E-04
65GO:1900140: regulation of seedling development8.60E-04
66GO:0055074: calcium ion homeostasis8.60E-04
67GO:0000162: tryptophan biosynthetic process9.38E-04
68GO:0050832: defense response to fungus1.00E-03
69GO:0080147: root hair cell development1.04E-03
70GO:0006457: protein folding1.11E-03
71GO:0000187: activation of MAPK activity1.23E-03
72GO:0002239: response to oomycetes1.23E-03
73GO:0043207: response to external biotic stimulus1.23E-03
74GO:0046902: regulation of mitochondrial membrane permeability1.23E-03
75GO:0006612: protein targeting to membrane1.23E-03
76GO:0010148: transpiration1.23E-03
77GO:0051289: protein homotetramerization1.23E-03
78GO:0016998: cell wall macromolecule catabolic process1.25E-03
79GO:0031347: regulation of defense response1.35E-03
80GO:0071456: cellular response to hypoxia1.36E-03
81GO:0009814: defense response, incompatible interaction1.36E-03
82GO:0009625: response to insect1.48E-03
83GO:1901141: regulation of lignin biosynthetic process1.64E-03
84GO:0080037: negative regulation of cytokinin-activated signaling pathway1.64E-03
85GO:0060548: negative regulation of cell death1.64E-03
86GO:0010483: pollen tube reception1.64E-03
87GO:0048638: regulation of developmental growth1.64E-03
88GO:0009652: thigmotropism1.64E-03
89GO:0010387: COP9 signalosome assembly1.64E-03
90GO:0045088: regulation of innate immune response1.64E-03
91GO:0010363: regulation of plant-type hypersensitive response1.64E-03
92GO:0071219: cellular response to molecule of bacterial origin1.64E-03
93GO:0000003: reproduction1.64E-03
94GO:0010225: response to UV-C2.09E-03
95GO:0006090: pyruvate metabolic process2.09E-03
96GO:2000762: regulation of phenylpropanoid metabolic process2.09E-03
97GO:0018279: protein N-linked glycosylation via asparagine2.09E-03
98GO:0046283: anthocyanin-containing compound metabolic process2.09E-03
99GO:0009620: response to fungus2.16E-03
100GO:0009646: response to absence of light2.18E-03
101GO:0009553: embryo sac development2.33E-03
102GO:0000302: response to reactive oxygen species2.50E-03
103GO:0002229: defense response to oomycetes2.50E-03
104GO:0006891: intra-Golgi vesicle-mediated transport2.50E-03
105GO:0010193: response to ozone2.50E-03
106GO:0060918: auxin transport2.57E-03
107GO:0009117: nucleotide metabolic process2.57E-03
108GO:0055114: oxidation-reduction process2.95E-03
109GO:0010310: regulation of hydrogen peroxide metabolic process3.09E-03
110GO:0019509: L-methionine salvage from methylthioadenosine3.09E-03
111GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.09E-03
112GO:0009612: response to mechanical stimulus3.09E-03
113GO:0009094: L-phenylalanine biosynthetic process3.09E-03
114GO:0006886: intracellular protein transport3.26E-03
115GO:0001666: response to hypoxia3.61E-03
116GO:0009610: response to symbiotic fungus3.64E-03
117GO:0071446: cellular response to salicylic acid stimulus3.64E-03
118GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.64E-03
119GO:0000338: protein deneddylation3.64E-03
120GO:0050829: defense response to Gram-negative bacterium3.64E-03
121GO:0007165: signal transduction3.81E-03
122GO:0031540: regulation of anthocyanin biosynthetic process4.23E-03
123GO:0006102: isocitrate metabolic process4.23E-03
124GO:0030091: protein repair4.23E-03
125GO:0009787: regulation of abscisic acid-activated signaling pathway4.23E-03
126GO:0006605: protein targeting4.23E-03
127GO:0030162: regulation of proteolysis4.23E-03
128GO:0008219: cell death4.70E-03
129GO:0043562: cellular response to nitrogen levels4.84E-03
130GO:0009699: phenylpropanoid biosynthetic process4.84E-03
131GO:0010262: somatic embryogenesis4.84E-03
132GO:0010497: plasmodesmata-mediated intercellular transport4.84E-03
133GO:0010204: defense response signaling pathway, resistance gene-independent4.84E-03
134GO:0009867: jasmonic acid mediated signaling pathway5.96E-03
135GO:2000280: regulation of root development6.15E-03
136GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.15E-03
137GO:0006099: tricarboxylic acid cycle6.23E-03
138GO:0043069: negative regulation of programmed cell death6.85E-03
139GO:0010215: cellulose microfibril organization6.85E-03
140GO:0009870: defense response signaling pathway, resistance gene-dependent6.85E-03
141GO:0009682: induced systemic resistance7.58E-03
142GO:0000272: polysaccharide catabolic process7.58E-03
143GO:0015770: sucrose transport7.58E-03
144GO:0048229: gametophyte development7.58E-03
145GO:0008643: carbohydrate transport8.31E-03
146GO:0012501: programmed cell death8.33E-03
147GO:0002213: defense response to insect8.33E-03
148GO:0010105: negative regulation of ethylene-activated signaling pathway8.33E-03
149GO:0010075: regulation of meristem growth9.11E-03
150GO:0006108: malate metabolic process9.11E-03
151GO:0009266: response to temperature stimulus9.92E-03
152GO:0009934: regulation of meristem structural organization9.92E-03
153GO:0006541: glutamine metabolic process9.92E-03
154GO:0009555: pollen development1.02E-02
155GO:0009611: response to wounding1.06E-02
156GO:0042343: indole glucosinolate metabolic process1.07E-02
157GO:0070588: calcium ion transmembrane transport1.07E-02
158GO:0034976: response to endoplasmic reticulum stress1.16E-02
159GO:0006487: protein N-linked glycosylation1.25E-02
160GO:0009116: nucleoside metabolic process1.25E-02
161GO:0000027: ribosomal large subunit assembly1.25E-02
162GO:0006418: tRNA aminoacylation for protein translation1.34E-02
163GO:0045454: cell redox homeostasis1.40E-02
164GO:0098542: defense response to other organism1.43E-02
165GO:0048278: vesicle docking1.43E-02
166GO:0055085: transmembrane transport1.47E-02
167GO:0009409: response to cold1.53E-02
168GO:0019748: secondary metabolic process1.53E-02
169GO:2000022: regulation of jasmonic acid mediated signaling pathway1.53E-02
170GO:0035428: hexose transmembrane transport1.53E-02
171GO:0009742: brassinosteroid mediated signaling pathway1.57E-02
172GO:0009411: response to UV1.62E-02
173GO:0001944: vasculature development1.62E-02
174GO:0009306: protein secretion1.72E-02
175GO:0070417: cellular response to cold1.82E-02
176GO:0042391: regulation of membrane potential1.93E-02
177GO:0010501: RNA secondary structure unwinding1.93E-02
178GO:0000413: protein peptidyl-prolyl isomerization1.93E-02
179GO:0010051: xylem and phloem pattern formation1.93E-02
180GO:0046686: response to cadmium ion1.95E-02
181GO:0046323: glucose import2.03E-02
182GO:0061025: membrane fusion2.14E-02
183GO:0006623: protein targeting to vacuole2.25E-02
184GO:0032502: developmental process2.47E-02
185GO:0009651: response to salt stress2.79E-02
186GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
187GO:0051607: defense response to virus2.95E-02
188GO:0009615: response to virus3.07E-02
189GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.19E-02
190GO:0006906: vesicle fusion3.32E-02
191GO:0016049: cell growth3.58E-02
192GO:0009407: toxin catabolic process3.97E-02
193GO:0007568: aging4.11E-02
194GO:0048527: lateral root development4.11E-02
195GO:0010119: regulation of stomatal movement4.11E-02
196GO:0009631: cold acclimation4.11E-02
197GO:0015031: protein transport4.15E-02
198GO:0045087: innate immune response4.39E-02
199GO:0006887: exocytosis4.95E-02
RankGO TermAdjusted P value
1GO:0008752: FMN reductase activity0.00E+00
2GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0052873: FMN reductase (NADPH) activity0.00E+00
7GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
8GO:0047886: farnesol dehydrogenase activity0.00E+00
9GO:0005212: structural constituent of eye lens0.00E+00
10GO:0033971: hydroxyisourate hydrolase activity0.00E+00
11GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
12GO:0005459: UDP-galactose transmembrane transporter activity5.31E-07
13GO:0005460: UDP-glucose transmembrane transporter activity2.19E-05
14GO:0051082: unfolded protein binding4.25E-05
15GO:0047631: ADP-ribose diphosphatase activity6.36E-05
16GO:0000210: NAD+ diphosphatase activity9.33E-05
17GO:0008565: protein transporter activity1.03E-04
18GO:0004656: procollagen-proline 4-dioxygenase activity1.29E-04
19GO:0051287: NAD binding1.78E-04
20GO:0004714: transmembrane receptor protein tyrosine kinase activity2.16E-04
21GO:0008930: methylthioadenosine nucleosidase activity2.39E-04
22GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.39E-04
23GO:0004425: indole-3-glycerol-phosphate synthase activity2.39E-04
24GO:0015157: oligosaccharide transmembrane transporter activity2.39E-04
25GO:0080042: ADP-glucose pyrophosphohydrolase activity2.39E-04
26GO:0004830: tryptophan-tRNA ligase activity2.39E-04
27GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.39E-04
28GO:0008782: adenosylhomocysteine nucleosidase activity2.39E-04
29GO:0005524: ATP binding4.27E-04
30GO:0004568: chitinase activity4.48E-04
31GO:0004674: protein serine/threonine kinase activity5.02E-04
32GO:0080041: ADP-ribose pyrophosphohydrolase activity5.29E-04
33GO:0017110: nucleoside-diphosphatase activity5.29E-04
34GO:0004775: succinate-CoA ligase (ADP-forming) activity5.29E-04
35GO:0004338: glucan exo-1,3-beta-glucosidase activity5.29E-04
36GO:0004385: guanylate kinase activity5.29E-04
37GO:0004776: succinate-CoA ligase (GDP-forming) activity5.29E-04
38GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.79E-04
39GO:0004049: anthranilate synthase activity8.60E-04
40GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.60E-04
41GO:0004148: dihydrolipoyl dehydrogenase activity8.60E-04
42GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity8.60E-04
43GO:0035529: NADH pyrophosphatase activity1.23E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.23E-03
45GO:0005507: copper ion binding1.33E-03
46GO:0047769: arogenate dehydratase activity1.64E-03
47GO:0004664: prephenate dehydratase activity1.64E-03
48GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.64E-03
49GO:0005086: ARF guanyl-nucleotide exchange factor activity1.64E-03
50GO:0004470: malic enzyme activity1.64E-03
51GO:0043495: protein anchor1.64E-03
52GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.64E-03
53GO:0016301: kinase activity1.65E-03
54GO:0005471: ATP:ADP antiporter activity2.09E-03
55GO:0015145: monosaccharide transmembrane transporter activity2.09E-03
56GO:0008641: small protein activating enzyme activity2.09E-03
57GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.09E-03
58GO:0005509: calcium ion binding2.28E-03
59GO:0004029: aldehyde dehydrogenase (NAD) activity2.57E-03
60GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.09E-03
61GO:0004602: glutathione peroxidase activity3.09E-03
62GO:0008506: sucrose:proton symporter activity3.64E-03
63GO:0005338: nucleotide-sugar transmembrane transporter activity3.64E-03
64GO:0008121: ubiquinol-cytochrome-c reductase activity3.64E-03
65GO:0004564: beta-fructofuranosidase activity4.23E-03
66GO:0004708: MAP kinase kinase activity4.23E-03
67GO:0004806: triglyceride lipase activity4.25E-03
68GO:0009055: electron carrier activity4.76E-03
69GO:0004222: metalloendopeptidase activity5.18E-03
70GO:0005516: calmodulin binding5.42E-03
71GO:0050897: cobalt ion binding5.43E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.15E-03
73GO:0004575: sucrose alpha-glucosidase activity6.15E-03
74GO:0004713: protein tyrosine kinase activity6.85E-03
75GO:0008559: xenobiotic-transporting ATPase activity7.58E-03
76GO:0008794: arsenate reductase (glutaredoxin) activity7.58E-03
77GO:0015095: magnesium ion transmembrane transporter activity9.11E-03
78GO:0005262: calcium channel activity9.11E-03
79GO:0005388: calcium-transporting ATPase activity9.11E-03
80GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.92E-03
81GO:0004190: aspartic-type endopeptidase activity1.07E-02
82GO:0016298: lipase activity1.07E-02
83GO:0030552: cAMP binding1.07E-02
84GO:0004867: serine-type endopeptidase inhibitor activity1.07E-02
85GO:0030553: cGMP binding1.07E-02
86GO:0008061: chitin binding1.07E-02
87GO:0031625: ubiquitin protein ligase binding1.15E-02
88GO:0031418: L-ascorbic acid binding1.25E-02
89GO:0005216: ion channel activity1.34E-02
90GO:0033612: receptor serine/threonine kinase binding1.43E-02
91GO:0015035: protein disulfide oxidoreductase activity1.52E-02
92GO:0016779: nucleotidyltransferase activity1.53E-02
93GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.54E-02
94GO:0030246: carbohydrate binding1.60E-02
95GO:0022891: substrate-specific transmembrane transporter activity1.62E-02
96GO:0008810: cellulase activity1.62E-02
97GO:0004672: protein kinase activity1.76E-02
98GO:0004812: aminoacyl-tRNA ligase activity1.82E-02
99GO:0005249: voltage-gated potassium channel activity1.93E-02
100GO:0030551: cyclic nucleotide binding1.93E-02
101GO:0005355: glucose transmembrane transporter activity2.14E-02
102GO:0050662: coenzyme binding2.14E-02
103GO:0010181: FMN binding2.14E-02
104GO:0015297: antiporter activity2.45E-02
105GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.83E-02
106GO:0005506: iron ion binding2.87E-02
107GO:0016597: amino acid binding2.95E-02
108GO:0051213: dioxygenase activity3.07E-02
109GO:0042802: identical protein binding3.26E-02
110GO:0003824: catalytic activity3.36E-02
111GO:0004004: ATP-dependent RNA helicase activity3.45E-02
112GO:0030247: polysaccharide binding3.45E-02
113GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.71E-02
114GO:0015238: drug transmembrane transporter activity3.84E-02
115GO:0030145: manganese ion binding4.11E-02
116GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.11E-02
117GO:0043531: ADP binding4.34E-02
118GO:0000987: core promoter proximal region sequence-specific DNA binding4.53E-02
119GO:0050660: flavin adenine dinucleotide binding4.57E-02
120GO:0000149: SNARE binding4.67E-02
121GO:0004712: protein serine/threonine/tyrosine kinase activity4.67E-02
RankGO TermAdjusted P value
1GO:0005784: Sec61 translocon complex0.00E+00
2GO:0031205: endoplasmic reticulum Sec complex0.00E+00
3GO:0005783: endoplasmic reticulum4.16E-10
4GO:0005886: plasma membrane3.02E-08
5GO:0031090: organelle membrane9.06E-06
6GO:0005773: vacuole1.52E-05
7GO:0005788: endoplasmic reticulum lumen3.40E-05
8GO:0005774: vacuolar membrane4.04E-05
9GO:0031234: extrinsic component of cytoplasmic side of plasma membrane2.39E-04
10GO:0005787: signal peptidase complex2.39E-04
11GO:0005618: cell wall2.52E-04
12GO:0005829: cytosol2.91E-04
13GO:0031225: anchored component of membrane4.28E-04
14GO:0005740: mitochondrial envelope4.48E-04
15GO:0048046: apoplast5.93E-04
16GO:0005750: mitochondrial respiratory chain complex III7.56E-04
17GO:0005795: Golgi stack8.45E-04
18GO:0030176: integral component of endoplasmic reticulum membrane8.45E-04
19GO:0016021: integral component of membrane1.41E-03
20GO:0030660: Golgi-associated vesicle membrane1.64E-03
21GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.64E-03
22GO:0000164: protein phosphatase type 1 complex2.09E-03
23GO:0008250: oligosaccharyltransferase complex2.09E-03
24GO:0030173: integral component of Golgi membrane3.09E-03
25GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.23E-03
26GO:0008180: COP9 signalosome5.48E-03
27GO:0030665: clathrin-coated vesicle membrane6.15E-03
28GO:0005789: endoplasmic reticulum membrane6.17E-03
29GO:0005887: integral component of plasma membrane6.81E-03
30GO:0017119: Golgi transport complex6.85E-03
31GO:0046658: anchored component of plasma membrane6.93E-03
32GO:0005576: extracellular region7.08E-03
33GO:0005765: lysosomal membrane7.58E-03
34GO:0009506: plasmodesma8.95E-03
35GO:0031012: extracellular matrix9.11E-03
36GO:0005769: early endosome1.16E-02
37GO:0005741: mitochondrial outer membrane1.43E-02
38GO:0005794: Golgi apparatus2.07E-02
39GO:0009504: cell plate2.25E-02
40GO:0019005: SCF ubiquitin ligase complex3.71E-02
41GO:0000151: ubiquitin ligase complex3.71E-02
42GO:0005643: nuclear pore3.71E-02
43GO:0009505: plant-type cell wall4.07E-02
44GO:0000325: plant-type vacuole4.11E-02
45GO:0009507: chloroplast4.90E-02
46GO:0031201: SNARE complex4.95E-02
47GO:0031902: late endosome membrane4.95E-02
<
Gene type



Gene DE type