GO Enrichment Analysis of Co-expressed Genes with
AT5G16715
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 7 | GO:0006573: valine metabolic process | 0.00E+00 |
| 8 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 9 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 10 | GO:0016117: carotenoid biosynthetic process | 1.09E-06 |
| 11 | GO:0009658: chloroplast organization | 4.76E-06 |
| 12 | GO:0019253: reductive pentose-phosphate cycle | 1.05E-05 |
| 13 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.47E-05 |
| 14 | GO:0006546: glycine catabolic process | 1.47E-05 |
| 15 | GO:0009902: chloroplast relocation | 1.47E-05 |
| 16 | GO:0016123: xanthophyll biosynthetic process | 2.41E-05 |
| 17 | GO:0042026: protein refolding | 5.10E-05 |
| 18 | GO:0006551: leucine metabolic process | 1.33E-04 |
| 19 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.33E-04 |
| 20 | GO:0010362: negative regulation of anion channel activity by blue light | 1.33E-04 |
| 21 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.33E-04 |
| 22 | GO:0071370: cellular response to gibberellin stimulus | 1.33E-04 |
| 23 | GO:0010480: microsporocyte differentiation | 1.33E-04 |
| 24 | GO:0019684: photosynthesis, light reaction | 2.29E-04 |
| 25 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.29E-04 |
| 26 | GO:0006810: transport | 2.76E-04 |
| 27 | GO:0009767: photosynthetic electron transport chain | 3.02E-04 |
| 28 | GO:0080183: response to photooxidative stress | 3.07E-04 |
| 29 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.07E-04 |
| 30 | GO:2000123: positive regulation of stomatal complex development | 3.07E-04 |
| 31 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.07E-04 |
| 32 | GO:0010020: chloroplast fission | 3.42E-04 |
| 33 | GO:0009744: response to sucrose | 3.83E-04 |
| 34 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.74E-04 |
| 35 | GO:2001295: malonyl-CoA biosynthetic process | 5.06E-04 |
| 36 | GO:0006000: fructose metabolic process | 5.06E-04 |
| 37 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 5.06E-04 |
| 38 | GO:0006696: ergosterol biosynthetic process | 5.06E-04 |
| 39 | GO:0061077: chaperone-mediated protein folding | 5.72E-04 |
| 40 | GO:0080092: regulation of pollen tube growth | 6.25E-04 |
| 41 | GO:0006730: one-carbon metabolic process | 6.25E-04 |
| 42 | GO:2001141: regulation of RNA biosynthetic process | 7.24E-04 |
| 43 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.24E-04 |
| 44 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.24E-04 |
| 45 | GO:0009855: determination of bilateral symmetry | 7.24E-04 |
| 46 | GO:0010731: protein glutathionylation | 7.24E-04 |
| 47 | GO:0043572: plastid fission | 7.24E-04 |
| 48 | GO:0009409: response to cold | 9.47E-04 |
| 49 | GO:0010037: response to carbon dioxide | 9.59E-04 |
| 50 | GO:0015976: carbon utilization | 9.59E-04 |
| 51 | GO:0009765: photosynthesis, light harvesting | 9.59E-04 |
| 52 | GO:0045727: positive regulation of translation | 9.59E-04 |
| 53 | GO:2000122: negative regulation of stomatal complex development | 9.59E-04 |
| 54 | GO:2000038: regulation of stomatal complex development | 9.59E-04 |
| 55 | GO:0009107: lipoate biosynthetic process | 1.21E-03 |
| 56 | GO:1902183: regulation of shoot apical meristem development | 1.21E-03 |
| 57 | GO:0010375: stomatal complex patterning | 1.21E-03 |
| 58 | GO:0016120: carotene biosynthetic process | 1.21E-03 |
| 59 | GO:0010236: plastoquinone biosynthetic process | 1.21E-03 |
| 60 | GO:0042549: photosystem II stabilization | 1.49E-03 |
| 61 | GO:0032973: amino acid export | 1.49E-03 |
| 62 | GO:0010190: cytochrome b6f complex assembly | 1.49E-03 |
| 63 | GO:0006633: fatty acid biosynthetic process | 1.52E-03 |
| 64 | GO:0010555: response to mannitol | 1.78E-03 |
| 65 | GO:2000067: regulation of root morphogenesis | 1.78E-03 |
| 66 | GO:0009955: adaxial/abaxial pattern specification | 1.78E-03 |
| 67 | GO:0080060: integument development | 1.78E-03 |
| 68 | GO:0010014: meristem initiation | 1.78E-03 |
| 69 | GO:0009082: branched-chain amino acid biosynthetic process | 1.78E-03 |
| 70 | GO:0006458: 'de novo' protein folding | 1.78E-03 |
| 71 | GO:0017148: negative regulation of translation | 1.78E-03 |
| 72 | GO:0009099: valine biosynthetic process | 1.78E-03 |
| 73 | GO:0043090: amino acid import | 2.09E-03 |
| 74 | GO:0048437: floral organ development | 2.09E-03 |
| 75 | GO:0016559: peroxisome fission | 2.42E-03 |
| 76 | GO:0048564: photosystem I assembly | 2.42E-03 |
| 77 | GO:0009853: photorespiration | 2.64E-03 |
| 78 | GO:0017004: cytochrome complex assembly | 2.77E-03 |
| 79 | GO:0006002: fructose 6-phosphate metabolic process | 2.77E-03 |
| 80 | GO:0071482: cellular response to light stimulus | 2.77E-03 |
| 81 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.77E-03 |
| 82 | GO:0007186: G-protein coupled receptor signaling pathway | 2.77E-03 |
| 83 | GO:0048193: Golgi vesicle transport | 2.77E-03 |
| 84 | GO:0009657: plastid organization | 2.77E-03 |
| 85 | GO:0009097: isoleucine biosynthetic process | 2.77E-03 |
| 86 | GO:0032544: plastid translation | 2.77E-03 |
| 87 | GO:0010206: photosystem II repair | 3.13E-03 |
| 88 | GO:0080144: amino acid homeostasis | 3.13E-03 |
| 89 | GO:2000024: regulation of leaf development | 3.13E-03 |
| 90 | GO:0009638: phototropism | 3.50E-03 |
| 91 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.89E-03 |
| 92 | GO:0046777: protein autophosphorylation | 4.26E-03 |
| 93 | GO:0048229: gametophyte development | 4.30E-03 |
| 94 | GO:0009773: photosynthetic electron transport in photosystem I | 4.30E-03 |
| 95 | GO:0010072: primary shoot apical meristem specification | 4.30E-03 |
| 96 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.30E-03 |
| 97 | GO:0006415: translational termination | 4.30E-03 |
| 98 | GO:0006352: DNA-templated transcription, initiation | 4.30E-03 |
| 99 | GO:0000272: polysaccharide catabolic process | 4.30E-03 |
| 100 | GO:0009750: response to fructose | 4.30E-03 |
| 101 | GO:0046686: response to cadmium ion | 4.65E-03 |
| 102 | GO:0045037: protein import into chloroplast stroma | 4.72E-03 |
| 103 | GO:0010075: regulation of meristem growth | 5.15E-03 |
| 104 | GO:0006094: gluconeogenesis | 5.15E-03 |
| 105 | GO:0005986: sucrose biosynthetic process | 5.15E-03 |
| 106 | GO:0006006: glucose metabolic process | 5.15E-03 |
| 107 | GO:0006096: glycolytic process | 5.39E-03 |
| 108 | GO:0009934: regulation of meristem structural organization | 5.60E-03 |
| 109 | GO:0010207: photosystem II assembly | 5.60E-03 |
| 110 | GO:0007031: peroxisome organization | 6.06E-03 |
| 111 | GO:0005985: sucrose metabolic process | 6.06E-03 |
| 112 | GO:0090351: seedling development | 6.06E-03 |
| 113 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.53E-03 |
| 114 | GO:0016575: histone deacetylation | 7.51E-03 |
| 115 | GO:0007005: mitochondrion organization | 8.55E-03 |
| 116 | GO:0010118: stomatal movement | 1.08E-02 |
| 117 | GO:0048653: anther development | 1.08E-02 |
| 118 | GO:0042631: cellular response to water deprivation | 1.08E-02 |
| 119 | GO:0080022: primary root development | 1.08E-02 |
| 120 | GO:0007623: circadian rhythm | 1.12E-02 |
| 121 | GO:0008360: regulation of cell shape | 1.13E-02 |
| 122 | GO:0009749: response to glucose | 1.25E-02 |
| 123 | GO:0019252: starch biosynthetic process | 1.25E-02 |
| 124 | GO:0006635: fatty acid beta-oxidation | 1.32E-02 |
| 125 | GO:0009416: response to light stimulus | 1.33E-02 |
| 126 | GO:0007264: small GTPase mediated signal transduction | 1.38E-02 |
| 127 | GO:1901657: glycosyl compound metabolic process | 1.44E-02 |
| 128 | GO:0010286: heat acclimation | 1.57E-02 |
| 129 | GO:0007267: cell-cell signaling | 1.57E-02 |
| 130 | GO:0009627: systemic acquired resistance | 1.85E-02 |
| 131 | GO:0042128: nitrate assimilation | 1.85E-02 |
| 132 | GO:0055114: oxidation-reduction process | 1.94E-02 |
| 133 | GO:0008219: cell death | 2.06E-02 |
| 134 | GO:0009817: defense response to fungus, incompatible interaction | 2.06E-02 |
| 135 | GO:0048481: plant ovule development | 2.06E-02 |
| 136 | GO:0018298: protein-chromophore linkage | 2.06E-02 |
| 137 | GO:0000160: phosphorelay signal transduction system | 2.14E-02 |
| 138 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.24E-02 |
| 139 | GO:0010119: regulation of stomatal movement | 2.29E-02 |
| 140 | GO:0009637: response to blue light | 2.44E-02 |
| 141 | GO:0016051: carbohydrate biosynthetic process | 2.44E-02 |
| 142 | GO:0009636: response to toxic substance | 3.18E-02 |
| 143 | GO:0042538: hyperosmotic salinity response | 3.44E-02 |
| 144 | GO:0030154: cell differentiation | 3.58E-02 |
| 145 | GO:0006364: rRNA processing | 3.62E-02 |
| 146 | GO:0006813: potassium ion transport | 3.62E-02 |
| 147 | GO:0048316: seed development | 4.17E-02 |
| 148 | GO:0006396: RNA processing | 4.74E-02 |
| 149 | GO:0018105: peptidyl-serine phosphorylation | 4.74E-02 |
| 150 | GO:0009742: brassinosteroid mediated signaling pathway | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 9 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 10 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 11 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 12 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 8.92E-07 |
| 13 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.85E-06 |
| 14 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.10E-05 |
| 15 | GO:0051996: squalene synthase activity | 1.33E-04 |
| 16 | GO:0010313: phytochrome binding | 1.33E-04 |
| 17 | GO:0003984: acetolactate synthase activity | 1.33E-04 |
| 18 | GO:0044183: protein binding involved in protein folding | 2.29E-04 |
| 19 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.29E-04 |
| 20 | GO:0010291: carotene beta-ring hydroxylase activity | 3.07E-04 |
| 21 | GO:0017118: lipoyltransferase activity | 3.07E-04 |
| 22 | GO:0042389: omega-3 fatty acid desaturase activity | 3.07E-04 |
| 23 | GO:0004618: phosphoglycerate kinase activity | 3.07E-04 |
| 24 | GO:0010297: heteropolysaccharide binding | 3.07E-04 |
| 25 | GO:0016415: octanoyltransferase activity | 3.07E-04 |
| 26 | GO:0004047: aminomethyltransferase activity | 3.07E-04 |
| 27 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.07E-04 |
| 28 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.07E-04 |
| 29 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.07E-04 |
| 30 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.07E-04 |
| 31 | GO:0005528: FK506 binding | 4.74E-04 |
| 32 | GO:0070402: NADPH binding | 5.06E-04 |
| 33 | GO:0001664: G-protein coupled receptor binding | 5.06E-04 |
| 34 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.06E-04 |
| 35 | GO:0031683: G-protein beta/gamma-subunit complex binding | 5.06E-04 |
| 36 | GO:0004075: biotin carboxylase activity | 5.06E-04 |
| 37 | GO:0030267: glyoxylate reductase (NADP) activity | 5.06E-04 |
| 38 | GO:0009882: blue light photoreceptor activity | 7.24E-04 |
| 39 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 7.24E-04 |
| 40 | GO:0048027: mRNA 5'-UTR binding | 7.24E-04 |
| 41 | GO:0048487: beta-tubulin binding | 7.24E-04 |
| 42 | GO:0016149: translation release factor activity, codon specific | 7.24E-04 |
| 43 | GO:0001053: plastid sigma factor activity | 9.59E-04 |
| 44 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.59E-04 |
| 45 | GO:0016987: sigma factor activity | 9.59E-04 |
| 46 | GO:0003989: acetyl-CoA carboxylase activity | 1.21E-03 |
| 47 | GO:0080030: methyl indole-3-acetate esterase activity | 1.49E-03 |
| 48 | GO:0042578: phosphoric ester hydrolase activity | 1.49E-03 |
| 49 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.49E-03 |
| 50 | GO:0016597: amino acid binding | 1.52E-03 |
| 51 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.78E-03 |
| 52 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.78E-03 |
| 53 | GO:0042802: identical protein binding | 2.32E-03 |
| 54 | GO:0004564: beta-fructofuranosidase activity | 2.42E-03 |
| 55 | GO:0004033: aldo-keto reductase (NADP) activity | 2.42E-03 |
| 56 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.77E-03 |
| 57 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.77E-03 |
| 58 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.77E-03 |
| 59 | GO:0003747: translation release factor activity | 3.13E-03 |
| 60 | GO:0004575: sucrose alpha-glucosidase activity | 3.50E-03 |
| 61 | GO:0043621: protein self-association | 3.67E-03 |
| 62 | GO:0005198: structural molecule activity | 3.81E-03 |
| 63 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.95E-03 |
| 64 | GO:0004089: carbonate dehydratase activity | 5.15E-03 |
| 65 | GO:0000155: phosphorelay sensor kinase activity | 5.15E-03 |
| 66 | GO:0003924: GTPase activity | 6.41E-03 |
| 67 | GO:0051082: unfolded protein binding | 6.48E-03 |
| 68 | GO:0004407: histone deacetylase activity | 7.01E-03 |
| 69 | GO:0005515: protein binding | 7.13E-03 |
| 70 | GO:0008324: cation transmembrane transporter activity | 7.51E-03 |
| 71 | GO:0005509: calcium ion binding | 7.55E-03 |
| 72 | GO:0004176: ATP-dependent peptidase activity | 8.02E-03 |
| 73 | GO:0033612: receptor serine/threonine kinase binding | 8.02E-03 |
| 74 | GO:0019843: rRNA binding | 8.12E-03 |
| 75 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 8.34E-03 |
| 76 | GO:0010181: FMN binding | 1.19E-02 |
| 77 | GO:0050662: coenzyme binding | 1.19E-02 |
| 78 | GO:0019901: protein kinase binding | 1.25E-02 |
| 79 | GO:0048038: quinone binding | 1.32E-02 |
| 80 | GO:0004518: nuclease activity | 1.38E-02 |
| 81 | GO:0008483: transaminase activity | 1.57E-02 |
| 82 | GO:0008237: metallopeptidase activity | 1.57E-02 |
| 83 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.85E-02 |
| 84 | GO:0004683: calmodulin-dependent protein kinase activity | 1.92E-02 |
| 85 | GO:0102483: scopolin beta-glucosidase activity | 1.92E-02 |
| 86 | GO:0008236: serine-type peptidase activity | 1.99E-02 |
| 87 | GO:0004222: metalloendopeptidase activity | 2.21E-02 |
| 88 | GO:0050897: cobalt ion binding | 2.29E-02 |
| 89 | GO:0003746: translation elongation factor activity | 2.44E-02 |
| 90 | GO:0005525: GTP binding | 2.49E-02 |
| 91 | GO:0008422: beta-glucosidase activity | 2.60E-02 |
| 92 | GO:0050661: NADP binding | 2.68E-02 |
| 93 | GO:0004364: glutathione transferase activity | 2.84E-02 |
| 94 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.09E-02 |
| 95 | GO:0051287: NAD binding | 3.35E-02 |
| 96 | GO:0003824: catalytic activity | 3.62E-02 |
| 97 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.62E-02 |
| 98 | GO:0015171: amino acid transmembrane transporter activity | 3.89E-02 |
| 99 | GO:0022857: transmembrane transporter activity | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.49E-32 |
| 4 | GO:0009941: chloroplast envelope | 4.76E-14 |
| 5 | GO:0009570: chloroplast stroma | 9.28E-13 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.88E-10 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.70E-08 |
| 8 | GO:0010319: stromule | 9.71E-08 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-06 |
| 10 | GO:0009579: thylakoid | 2.32E-06 |
| 11 | GO:0005960: glycine cleavage complex | 7.85E-06 |
| 12 | GO:0030095: chloroplast photosystem II | 1.05E-05 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 2.19E-05 |
| 14 | GO:0019898: extrinsic component of membrane | 7.07E-05 |
| 15 | GO:0031969: chloroplast membrane | 9.78E-05 |
| 16 | GO:0009534: chloroplast thylakoid | 1.72E-04 |
| 17 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.07E-04 |
| 18 | GO:0042170: plastid membrane | 3.07E-04 |
| 19 | GO:0048046: apoplast | 6.40E-04 |
| 20 | GO:0005775: vacuolar lumen | 7.24E-04 |
| 21 | GO:0009706: chloroplast inner membrane | 8.70E-04 |
| 22 | GO:0005759: mitochondrial matrix | 1.52E-03 |
| 23 | GO:0005779: integral component of peroxisomal membrane | 2.77E-03 |
| 24 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.77E-03 |
| 25 | GO:0031977: thylakoid lumen | 3.13E-03 |
| 26 | GO:0016324: apical plasma membrane | 3.89E-03 |
| 27 | GO:0042651: thylakoid membrane | 7.51E-03 |
| 28 | GO:0010287: plastoglobule | 7.69E-03 |
| 29 | GO:0009532: plastid stroma | 8.02E-03 |
| 30 | GO:0005623: cell | 8.34E-03 |
| 31 | GO:0009523: photosystem II | 1.25E-02 |
| 32 | GO:0005778: peroxisomal membrane | 1.57E-02 |
| 33 | GO:0009707: chloroplast outer membrane | 2.06E-02 |
| 34 | GO:0000325: plant-type vacuole | 2.29E-02 |
| 35 | GO:0031902: late endosome membrane | 2.76E-02 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 4.17E-02 |
| 37 | GO:0005834: heterotrimeric G-protein complex | 4.26E-02 |