Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G16030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
3GO:0090627: plant epidermal cell differentiation0.00E+00
4GO:0009734: auxin-activated signaling pathway1.98E-06
5GO:0009733: response to auxin3.34E-06
6GO:0046620: regulation of organ growth2.11E-05
7GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.34E-05
8GO:0000476: maturation of 4.5S rRNA5.34E-05
9GO:0000967: rRNA 5'-end processing5.34E-05
10GO:0015671: oxygen transport5.34E-05
11GO:0010480: microsporocyte differentiation5.34E-05
12GO:0009926: auxin polar transport6.88E-05
13GO:0009664: plant-type cell wall organization9.66E-05
14GO:0034470: ncRNA processing1.30E-04
15GO:0007275: multicellular organism development1.50E-04
16GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.02E-04
17GO:0045493: xylan catabolic process2.22E-04
18GO:0034220: ion transmembrane transport2.60E-04
19GO:0051513: regulation of monopolar cell growth3.25E-04
20GO:0080170: hydrogen peroxide transmembrane transport3.25E-04
21GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.25E-04
22GO:0010306: rhamnogalacturonan II biosynthetic process3.25E-04
23GO:0009828: plant-type cell wall loosening4.21E-04
24GO:0030104: water homeostasis4.35E-04
25GO:0015995: chlorophyll biosynthetic process5.86E-04
26GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway6.76E-04
27GO:0009228: thiamine biosynthetic process6.76E-04
28GO:0009913: epidermal cell differentiation6.76E-04
29GO:0009942: longitudinal axis specification8.05E-04
30GO:0034599: cellular response to oxidative stress8.46E-04
31GO:0048437: floral organ development9.40E-04
32GO:0050829: defense response to Gram-negative bacterium9.40E-04
33GO:0009642: response to light intensity1.08E-03
34GO:0007389: pattern specification process1.23E-03
35GO:0009245: lipid A biosynthetic process1.38E-03
36GO:0019432: triglyceride biosynthetic process1.38E-03
37GO:0010206: photosystem II repair1.38E-03
38GO:0048589: developmental growth1.38E-03
39GO:0010205: photoinhibition1.54E-03
40GO:0006949: syncytium formation1.71E-03
41GO:0009698: phenylpropanoid metabolic process1.88E-03
42GO:0043085: positive regulation of catalytic activity1.88E-03
43GO:0048229: gametophyte development1.88E-03
44GO:0010152: pollen maturation2.06E-03
45GO:0010075: regulation of meristem growth2.25E-03
46GO:0010588: cotyledon vascular tissue pattern formation2.25E-03
47GO:0009934: regulation of meristem structural organization2.43E-03
48GO:0010030: positive regulation of seed germination2.63E-03
49GO:0006833: water transport2.83E-03
50GO:0040008: regulation of growth3.16E-03
51GO:0007017: microtubule-based process3.24E-03
52GO:0045490: pectin catabolic process3.30E-03
53GO:0048511: rhythmic process3.46E-03
54GO:0016114: terpenoid biosynthetic process3.46E-03
55GO:0010082: regulation of root meristem growth3.90E-03
56GO:0048443: stamen development4.13E-03
57GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.36E-03
58GO:0010087: phloem or xylem histogenesis4.60E-03
59GO:0048653: anther development4.60E-03
60GO:0042631: cellular response to water deprivation4.60E-03
61GO:0042335: cuticle development4.60E-03
62GO:0080022: primary root development4.60E-03
63GO:0048868: pollen tube development4.84E-03
64GO:0010305: leaf vascular tissue pattern formation4.84E-03
65GO:0006662: glycerol ether metabolic process4.84E-03
66GO:0009826: unidimensional cell growth4.90E-03
67GO:0042752: regulation of circadian rhythm5.09E-03
68GO:0048825: cotyledon development5.34E-03
69GO:0010193: response to ozone5.60E-03
70GO:0000302: response to reactive oxygen species5.60E-03
71GO:0010583: response to cyclopentenone5.86E-03
72GO:0010252: auxin homeostasis6.39E-03
73GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.52E-03
74GO:0015979: photosynthesis7.20E-03
75GO:0045454: cell redox homeostasis7.55E-03
76GO:0009627: systemic acquired resistance7.79E-03
77GO:0010411: xyloglucan metabolic process8.09E-03
78GO:0006631: fatty acid metabolic process1.16E-02
79GO:0009735: response to cytokinin1.51E-02
80GO:0010224: response to UV-B1.55E-02
81GO:0009416: response to light stimulus1.66E-02
82GO:0048367: shoot system development1.74E-02
83GO:0042545: cell wall modification1.90E-02
84GO:0009624: response to nematode1.94E-02
85GO:0055085: transmembrane transport2.11E-02
86GO:0009845: seed germination2.41E-02
87GO:0042744: hydrogen peroxide catabolic process2.50E-02
88GO:0006633: fatty acid biosynthetic process2.68E-02
89GO:0016567: protein ubiquitination2.78E-02
90GO:0006468: protein phosphorylation2.85E-02
91GO:0007623: circadian rhythm2.87E-02
92GO:0071555: cell wall organization3.36E-02
93GO:0009860: pollen tube growth4.12E-02
94GO:0009409: response to cold4.53E-02
95GO:0046777: protein autophosphorylation4.78E-02
96GO:0006810: transport4.90E-02
RankGO TermAdjusted P value
1GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
2GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
3GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
4GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
5GO:0005344: oxygen transporter activity5.34E-05
6GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.34E-05
7GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity1.30E-04
8GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.30E-04
9GO:0010011: auxin binding4.35E-04
10GO:0009044: xylan 1,4-beta-xylosidase activity4.35E-04
11GO:0046556: alpha-L-arabinofuranosidase activity4.35E-04
12GO:0015250: water channel activity5.00E-04
13GO:0004130: cytochrome-c peroxidase activity6.76E-04
14GO:0031177: phosphopantetheine binding6.76E-04
15GO:0000035: acyl binding8.05E-04
16GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.08E-03
17GO:0009672: auxin:proton symporter activity1.54E-03
18GO:0008047: enzyme activator activity1.71E-03
19GO:0031072: heat shock protein binding2.25E-03
20GO:0010329: auxin efflux transmembrane transporter activity2.25E-03
21GO:0016829: lyase activity2.60E-03
22GO:0005528: FK506 binding3.03E-03
23GO:0033612: receptor serine/threonine kinase binding3.46E-03
24GO:0030570: pectate lyase activity3.90E-03
25GO:0003756: protein disulfide isomerase activity4.13E-03
26GO:0047134: protein-disulfide reductase activity4.36E-03
27GO:0004791: thioredoxin-disulfide reductase activity5.09E-03
28GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.12E-03
29GO:0005200: structural constituent of cytoskeleton6.66E-03
30GO:0005096: GTPase activator activity8.99E-03
31GO:0030145: manganese ion binding9.61E-03
32GO:0004712: protein serine/threonine/tyrosine kinase activity1.09E-02
33GO:0004185: serine-type carboxypeptidase activity1.23E-02
34GO:0008289: lipid binding1.30E-02
35GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.37E-02
36GO:0004674: protein serine/threonine kinase activity1.46E-02
37GO:0045330: aspartyl esterase activity1.63E-02
38GO:0004650: polygalacturonase activity1.82E-02
39GO:0030599: pectinesterase activity1.86E-02
40GO:0051082: unfolded protein binding1.94E-02
41GO:0015035: protein disulfide oxidoreductase activity1.98E-02
42GO:0046910: pectinesterase inhibitor activity2.73E-02
43GO:0004601: peroxidase activity3.91E-02
44GO:0016788: hydrolase activity, acting on ester bonds3.96E-02
45GO:0005515: protein binding4.27E-02
46GO:0052689: carboxylic ester hydrolase activity4.89E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009534: chloroplast thylakoid1.82E-08
3GO:0009535: chloroplast thylakoid membrane2.36E-07
4GO:0009543: chloroplast thylakoid lumen1.37E-05
5GO:0009507: chloroplast3.35E-05
6GO:0043674: columella5.34E-05
7GO:0031977: thylakoid lumen6.08E-05
8GO:0030095: chloroplast photosystem II9.37E-05
9GO:0009570: chloroplast stroma1.06E-04
10GO:0009531: secondary cell wall3.25E-04
11GO:0009533: chloroplast stromal thylakoid9.40E-04
12GO:0042807: central vacuole9.40E-04
13GO:0009538: photosystem I reaction center1.08E-03
14GO:0045298: tubulin complex1.38E-03
15GO:0005886: plasma membrane1.43E-03
16GO:0005618: cell wall2.69E-03
17GO:0009579: thylakoid3.49E-03
18GO:0009523: photosystem II5.34E-03
19GO:0071944: cell periphery6.12E-03
20GO:0009505: plant-type cell wall9.06E-03
21GO:0005887: integral component of plasma membrane1.27E-02
22GO:0016020: membrane1.79E-02
23GO:0005623: cell2.32E-02
24GO:0009705: plant-type vacuole membrane2.87E-02
25GO:0005874: microtubule4.45E-02
26GO:0031969: chloroplast membrane4.56E-02
27GO:0009941: chloroplast envelope4.74E-02
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Gene type



Gene DE type