Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G15550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072321: chaperone-mediated protein transport0.00E+00
2GO:0071433: cell wall repair0.00E+00
3GO:2001143: N-methylnicotinate transport0.00E+00
4GO:0072660: maintenance of protein location in plasma membrane0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0042430: indole-containing compound metabolic process0.00E+00
7GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
8GO:0045747: positive regulation of Notch signaling pathway0.00E+00
9GO:1900367: positive regulation of defense response to insect0.00E+00
10GO:2001142: nicotinate transport0.00E+00
11GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
12GO:2000072: regulation of defense response to fungus, incompatible interaction4.48E-06
13GO:0031349: positive regulation of defense response4.48E-06
14GO:0072661: protein targeting to plasma membrane1.59E-05
15GO:0000187: activation of MAPK activity3.55E-05
16GO:0015696: ammonium transport3.55E-05
17GO:0006886: intracellular protein transport5.62E-05
18GO:0006468: protein phosphorylation5.75E-05
19GO:0060548: negative regulation of cell death6.35E-05
20GO:0072488: ammonium transmembrane transport6.35E-05
21GO:0080142: regulation of salicylic acid biosynthetic process6.35E-05
22GO:0010942: positive regulation of cell death1.45E-04
23GO:0031348: negative regulation of defense response1.84E-04
24GO:0009814: defense response, incompatible interaction1.84E-04
25GO:0000911: cytokinesis by cell plate formation1.97E-04
26GO:0016192: vesicle-mediated transport2.29E-04
27GO:0019276: UDP-N-acetylgalactosamine metabolic process3.14E-04
28GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.14E-04
29GO:0006047: UDP-N-acetylglucosamine metabolic process3.14E-04
30GO:0043547: positive regulation of GTPase activity3.14E-04
31GO:0051245: negative regulation of cellular defense response3.14E-04
32GO:0006422: aspartyl-tRNA aminoacylation3.14E-04
33GO:1990022: RNA polymerase III complex localization to nucleus3.14E-04
34GO:1901183: positive regulation of camalexin biosynthetic process3.14E-04
35GO:0044376: RNA polymerase II complex import to nucleus3.14E-04
36GO:0043687: post-translational protein modification3.14E-04
37GO:0060862: negative regulation of floral organ abscission3.14E-04
38GO:0046244: salicylic acid catabolic process3.14E-04
39GO:0009968: negative regulation of signal transduction3.14E-04
40GO:0006083: acetate metabolic process3.14E-04
41GO:0010197: polar nucleus fusion3.22E-04
42GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.24E-04
43GO:2000031: regulation of salicylic acid mediated signaling pathway3.98E-04
44GO:0000302: response to reactive oxygen species4.24E-04
45GO:0009617: response to bacterium4.26E-04
46GO:1900426: positive regulation of defense response to bacterium5.66E-04
47GO:0042742: defense response to bacterium5.68E-04
48GO:0009626: plant-type hypersensitive response5.87E-04
49GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.87E-04
50GO:0010618: aerenchyma formation6.87E-04
51GO:0080181: lateral root branching6.87E-04
52GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.87E-04
53GO:0010541: acropetal auxin transport6.87E-04
54GO:0008535: respiratory chain complex IV assembly6.87E-04
55GO:0010235: guard mother cell cytokinesis6.87E-04
56GO:0051252: regulation of RNA metabolic process6.87E-04
57GO:0051258: protein polymerization6.87E-04
58GO:0002221: pattern recognition receptor signaling pathway6.87E-04
59GO:0006626: protein targeting to mitochondrion9.84E-04
60GO:0015031: protein transport1.01E-03
61GO:0050832: defense response to fungus1.05E-03
62GO:0006011: UDP-glucose metabolic process1.11E-03
63GO:0045039: protein import into mitochondrial inner membrane1.11E-03
64GO:0015695: organic cation transport1.11E-03
65GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.11E-03
66GO:1900140: regulation of seedling development1.11E-03
67GO:0002230: positive regulation of defense response to virus by host1.11E-03
68GO:0055074: calcium ion homeostasis1.11E-03
69GO:0009737: response to abscisic acid1.21E-03
70GO:0042343: indole glucosinolate metabolic process1.24E-03
71GO:0045087: innate immune response1.28E-03
72GO:0006099: tricarboxylic acid cycle1.35E-03
73GO:0000027: ribosomal large subunit assembly1.52E-03
74GO:0019438: aromatic compound biosynthetic process1.60E-03
75GO:0048194: Golgi vesicle budding1.60E-03
76GO:0002239: response to oomycetes1.60E-03
77GO:0010306: rhamnogalacturonan II biosynthetic process1.60E-03
78GO:0006612: protein targeting to membrane1.60E-03
79GO:0071323: cellular response to chitin1.60E-03
80GO:0010148: transpiration1.60E-03
81GO:1902290: positive regulation of defense response to oomycetes1.60E-03
82GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery1.60E-03
83GO:0001676: long-chain fatty acid metabolic process1.60E-03
84GO:0010150: leaf senescence1.61E-03
85GO:0046345: abscisic acid catabolic process2.14E-03
86GO:0010363: regulation of plant-type hypersensitive response2.14E-03
87GO:2000038: regulation of stomatal complex development2.14E-03
88GO:0006221: pyrimidine nucleotide biosynthetic process2.14E-03
89GO:0045824: negative regulation of innate immune response2.14E-03
90GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.14E-03
91GO:0010188: response to microbial phytotoxin2.14E-03
92GO:0009625: response to insect2.20E-03
93GO:0006952: defense response2.40E-03
94GO:0010225: response to UV-C2.74E-03
95GO:0018279: protein N-linked glycosylation via asparagine2.74E-03
96GO:0046283: anthocyanin-containing compound metabolic process2.74E-03
97GO:0006662: glycerol ether metabolic process3.01E-03
98GO:0061025: membrane fusion3.24E-03
99GO:0060918: auxin transport3.38E-03
100GO:0045040: protein import into mitochondrial outer membrane3.38E-03
101GO:0047484: regulation of response to osmotic stress3.38E-03
102GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.38E-03
103GO:0000741: karyogamy3.38E-03
104GO:0009620: response to fungus3.59E-03
105GO:0009553: embryo sac development3.88E-03
106GO:2000037: regulation of stomatal complex patterning4.06E-03
107GO:0010310: regulation of hydrogen peroxide metabolic process4.06E-03
108GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.06E-03
109GO:0009612: response to mechanical stimulus4.06E-03
110GO:0006694: steroid biosynthetic process4.06E-03
111GO:0010200: response to chitin4.60E-03
112GO:0071446: cellular response to salicylic acid stimulus4.80E-03
113GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c4.80E-03
114GO:1900057: positive regulation of leaf senescence4.80E-03
115GO:0006102: isocitrate metabolic process5.57E-03
116GO:0009787: regulation of abscisic acid-activated signaling pathway5.57E-03
117GO:0043068: positive regulation of programmed cell death5.57E-03
118GO:0006605: protein targeting5.57E-03
119GO:0009816: defense response to bacterium, incompatible interaction5.68E-03
120GO:0045454: cell redox homeostasis5.74E-03
121GO:0006906: vesicle fusion6.00E-03
122GO:0006979: response to oxidative stress6.03E-03
123GO:0043562: cellular response to nitrogen levels6.39E-03
124GO:0009699: phenylpropanoid biosynthetic process6.39E-03
125GO:0010204: defense response signaling pathway, resistance gene-independent6.39E-03
126GO:0007338: single fertilization7.24E-03
127GO:0006499: N-terminal protein myristoylation7.74E-03
128GO:0010119: regulation of stomatal movement8.12E-03
129GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.14E-03
130GO:0006457: protein folding8.42E-03
131GO:0009867: jasmonic acid mediated signaling pathway8.90E-03
132GO:0043069: negative regulation of programmed cell death9.07E-03
133GO:0010162: seed dormancy process9.07E-03
134GO:0000103: sulfate assimilation9.07E-03
135GO:0006032: chitin catabolic process9.07E-03
136GO:0034599: cellular response to oxidative stress9.31E-03
137GO:0007166: cell surface receptor signaling pathway9.60E-03
138GO:0006887: exocytosis1.06E-02
139GO:0006897: endocytosis1.06E-02
140GO:0006631: fatty acid metabolic process1.06E-02
141GO:0009409: response to cold1.07E-02
142GO:0071365: cellular response to auxin stimulus1.11E-02
143GO:0002213: defense response to insect1.11E-02
144GO:0010105: negative regulation of ethylene-activated signaling pathway1.11E-02
145GO:0051707: response to other organism1.15E-02
146GO:0010229: inflorescence development1.21E-02
147GO:0000165: MAPK cascade1.40E-02
148GO:0046686: response to cadmium ion1.41E-02
149GO:0046688: response to copper ion1.43E-02
150GO:0009825: multidimensional cell growth1.43E-02
151GO:0070588: calcium ion transmembrane transport1.43E-02
152GO:0034976: response to endoplasmic reticulum stress1.54E-02
153GO:0006364: rRNA processing1.55E-02
154GO:0006487: protein N-linked glycosylation1.66E-02
155GO:0009944: polarity specification of adaxial/abaxial axis1.66E-02
156GO:0080147: root hair cell development1.66E-02
157GO:0009863: salicylic acid mediated signaling pathway1.66E-02
158GO:0030150: protein import into mitochondrial matrix1.66E-02
159GO:0006406: mRNA export from nucleus1.66E-02
160GO:0010187: negative regulation of seed germination1.66E-02
161GO:0006825: copper ion transport1.78E-02
162GO:0016575: histone deacetylation1.78E-02
163GO:0080167: response to karrikin1.85E-02
164GO:0015992: proton transport1.91E-02
165GO:0098542: defense response to other organism1.91E-02
166GO:0048278: vesicle docking1.91E-02
167GO:0016998: cell wall macromolecule catabolic process1.91E-02
168GO:0046777: protein autophosphorylation2.02E-02
169GO:0019748: secondary metabolic process2.03E-02
170GO:2000022: regulation of jasmonic acid mediated signaling pathway2.03E-02
171GO:0030433: ubiquitin-dependent ERAD pathway2.03E-02
172GO:0006508: proteolysis2.07E-02
173GO:0010227: floral organ abscission2.16E-02
174GO:0009294: DNA mediated transformation2.16E-02
175GO:0018105: peptidyl-serine phosphorylation2.28E-02
176GO:0042127: regulation of cell proliferation2.29E-02
177GO:0009306: protein secretion2.29E-02
178GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.43E-02
179GO:0006606: protein import into nucleus2.57E-02
180GO:0042631: cellular response to water deprivation2.57E-02
181GO:0042391: regulation of membrane potential2.57E-02
182GO:0008033: tRNA processing2.57E-02
183GO:0000413: protein peptidyl-prolyl isomerization2.57E-02
184GO:0010051: xylem and phloem pattern formation2.57E-02
185GO:0010182: sugar mediated signaling pathway2.71E-02
186GO:0009646: response to absence of light2.85E-02
187GO:0032259: methylation2.86E-02
188GO:0016042: lipid catabolic process2.92E-02
189GO:0006623: protein targeting to vacuole3.00E-02
190GO:0009749: response to glucose3.00E-02
191GO:0009845: seed germination3.00E-02
192GO:0009408: response to heat3.02E-02
193GO:0002229: defense response to oomycetes3.15E-02
194GO:0006891: intra-Golgi vesicle-mediated transport3.15E-02
195GO:0010193: response to ozone3.15E-02
196GO:0009790: embryo development3.24E-02
197GO:0030163: protein catabolic process3.45E-02
198GO:0009567: double fertilization forming a zygote and endosperm3.61E-02
199GO:0040008: regulation of growth3.66E-02
200GO:0001666: response to hypoxia4.09E-02
201GO:0006470: protein dephosphorylation4.37E-02
202GO:0009627: systemic acquired resistance4.42E-02
203GO:0008219: cell death4.93E-02
204GO:0009817: defense response to fungus, incompatible interaction4.93E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0090416: nicotinate transporter activity0.00E+00
3GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
4GO:0004164: diphthine synthase activity0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0090417: N-methylnicotinate transporter activity0.00E+00
7GO:0005524: ATP binding2.92E-05
8GO:0004190: aspartic-type endopeptidase activity8.78E-05
9GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.00E-04
10GO:0008519: ammonium transmembrane transporter activity1.45E-04
11GO:0004656: procollagen-proline 4-dioxygenase activity1.97E-04
12GO:0008320: protein transmembrane transporter activity2.57E-04
13GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.14E-04
14GO:0003987: acetate-CoA ligase activity3.14E-04
15GO:0015085: calcium ion transmembrane transporter activity3.14E-04
16GO:0004815: aspartate-tRNA ligase activity3.14E-04
17GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.14E-04
18GO:0051669: fructan beta-fructosidase activity3.14E-04
19GO:0048037: cofactor binding3.14E-04
20GO:0031219: levanase activity3.14E-04
21GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.14E-04
22GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.14E-04
23GO:0004714: transmembrane receptor protein tyrosine kinase activity3.24E-04
24GO:0004708: MAP kinase kinase activity3.24E-04
25GO:0004672: protein kinase activity4.60E-04
26GO:0008428: ribonuclease inhibitor activity6.87E-04
27GO:0004775: succinate-CoA ligase (ADP-forming) activity6.87E-04
28GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity6.87E-04
29GO:0004776: succinate-CoA ligase (GDP-forming) activity6.87E-04
30GO:0016301: kinase activity6.88E-04
31GO:0004683: calmodulin-dependent protein kinase activity8.37E-04
32GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.50E-04
33GO:0005516: calmodulin binding9.72E-04
34GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.84E-04
35GO:0016531: copper chaperone activity1.11E-03
36GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.11E-03
37GO:0004148: dihydrolipoyl dehydrogenase activity1.11E-03
38GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.11E-03
39GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.28E-03
40GO:0008565: protein transporter activity1.30E-03
41GO:0000166: nucleotide binding1.47E-03
42GO:0004407: histone deacetylase activity1.52E-03
43GO:0009678: hydrogen-translocating pyrophosphatase activity1.60E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.60E-03
45GO:0005484: SNAP receptor activity1.76E-03
46GO:0033612: receptor serine/threonine kinase binding1.84E-03
47GO:0004576: oligosaccharyl transferase activity2.14E-03
48GO:0043495: protein anchor2.14E-03
49GO:0004930: G-protein coupled receptor activity2.14E-03
50GO:0047134: protein-disulfide reductase activity2.59E-03
51GO:0008948: oxaloacetate decarboxylase activity2.74E-03
52GO:0004040: amidase activity2.74E-03
53GO:0004791: thioredoxin-disulfide reductase activity3.24E-03
54GO:0031593: polyubiquitin binding3.38E-03
55GO:0004029: aldehyde dehydrogenase (NAD) activity3.38E-03
56GO:0016208: AMP binding3.38E-03
57GO:0035252: UDP-xylosyltransferase activity3.38E-03
58GO:0102391: decanoate--CoA ligase activity4.06E-03
59GO:0004012: phospholipid-translocating ATPase activity4.06E-03
60GO:0004674: protein serine/threonine kinase activity4.23E-03
61GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.23E-03
62GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.79E-03
63GO:0004467: long-chain fatty acid-CoA ligase activity4.80E-03
64GO:0004427: inorganic diphosphatase activity4.80E-03
65GO:0008121: ubiquinol-cytochrome-c reductase activity4.80E-03
66GO:0030515: snoRNA binding4.80E-03
67GO:0017056: structural constituent of nuclear pore5.57E-03
68GO:0009931: calcium-dependent protein serine/threonine kinase activity6.00E-03
69GO:0004806: triglyceride lipase activity6.33E-03
70GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.39E-03
71GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.40E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.14E-03
73GO:0005487: nucleocytoplasmic transporter activity8.14E-03
74GO:0004568: chitinase activity9.07E-03
75GO:0008171: O-methyltransferase activity9.07E-03
76GO:0004713: protein tyrosine kinase activity9.07E-03
77GO:0000149: SNARE binding9.73E-03
78GO:0008559: xenobiotic-transporting ATPase activity1.00E-02
79GO:0031072: heat shock protein binding1.21E-02
80GO:0005388: calcium-transporting ATPase activity1.21E-02
81GO:0008168: methyltransferase activity1.34E-02
82GO:0030552: cAMP binding1.43E-02
83GO:0030553: cGMP binding1.43E-02
84GO:0008061: chitin binding1.43E-02
85GO:0003712: transcription cofactor activity1.43E-02
86GO:0016298: lipase activity1.61E-02
87GO:0031418: L-ascorbic acid binding1.66E-02
88GO:0003954: NADH dehydrogenase activity1.66E-02
89GO:0043130: ubiquitin binding1.66E-02
90GO:0005216: ion channel activity1.78E-02
91GO:0004707: MAP kinase activity1.91E-02
92GO:0016779: nucleotidyltransferase activity2.03E-02
93GO:0022857: transmembrane transporter activity2.09E-02
94GO:0022891: substrate-specific transmembrane transporter activity2.16E-02
95GO:0051082: unfolded protein binding2.22E-02
96GO:0005515: protein binding2.24E-02
97GO:0015035: protein disulfide oxidoreductase activity2.28E-02
98GO:0016746: transferase activity, transferring acyl groups2.28E-02
99GO:0008514: organic anion transmembrane transporter activity2.29E-02
100GO:0003756: protein disulfide isomerase activity2.29E-02
101GO:0016740: transferase activity2.52E-02
102GO:0005249: voltage-gated potassium channel activity2.57E-02
103GO:0030551: cyclic nucleotide binding2.57E-02
104GO:0030276: clathrin binding2.71E-02
105GO:0004527: exonuclease activity2.71E-02
106GO:0010181: FMN binding2.85E-02
107GO:0004197: cysteine-type endopeptidase activity3.30E-02
108GO:0051213: dioxygenase activity4.09E-02
109GO:0046872: metal ion binding4.20E-02
110GO:0004721: phosphoprotein phosphatase activity4.59E-02
111GO:0005509: calcium ion binding4.68E-02
112GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.76E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0042719: mitochondrial intermembrane space protein transporter complex0.00E+00
3GO:0005886: plasma membrane5.39E-10
4GO:0005783: endoplasmic reticulum2.06E-06
5GO:0016021: integral component of membrane9.32E-06
6GO:0008250: oligosaccharyltransferase complex1.00E-04
7GO:0045252: oxoglutarate dehydrogenase complex3.14E-04
8GO:0005802: trans-Golgi network3.14E-04
9GO:0030131: clathrin adaptor complex3.24E-04
10GO:0009504: cell plate3.89E-04
11GO:0009514: glyoxysome3.98E-04
12GO:0030665: clathrin-coated vesicle membrane5.66E-04
13GO:0031304: intrinsic component of mitochondrial inner membrane6.87E-04
14GO:0005901: caveola6.87E-04
15GO:0030134: ER to Golgi transport vesicle6.87E-04
16GO:0005788: endoplasmic reticulum lumen7.31E-04
17GO:0046861: glyoxysomal membrane1.11E-03
18GO:0031080: nuclear pore outer ring1.11E-03
19GO:0005768: endosome1.47E-03
20GO:0005758: mitochondrial intermembrane space1.52E-03
21GO:0005789: endoplasmic reticulum membrane1.57E-03
22GO:0030658: transport vesicle membrane1.60E-03
23GO:0005774: vacuolar membrane1.61E-03
24GO:0005794: Golgi apparatus1.89E-03
25GO:0030660: Golgi-associated vesicle membrane2.14E-03
26GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.14E-03
27GO:0005744: mitochondrial inner membrane presequence translocase complex2.39E-03
28GO:0000164: protein phosphatase type 1 complex2.74E-03
29GO:0031428: box C/D snoRNP complex3.38E-03
30GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.62E-03
31GO:0005801: cis-Golgi network4.06E-03
32GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.80E-03
33GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.57E-03
34GO:0005742: mitochondrial outer membrane translocase complex6.39E-03
35GO:0009506: plasmodesma6.45E-03
36GO:0019005: SCF ubiquitin ligase complex7.02E-03
37GO:0005743: mitochondrial inner membrane7.07E-03
38GO:0031901: early endosome membrane7.24E-03
39GO:0005829: cytosol7.52E-03
40GO:0017119: Golgi transport complex9.07E-03
41GO:0005765: lysosomal membrane1.00E-02
42GO:0031201: SNARE complex1.06E-02
43GO:0032040: small-subunit processome1.11E-02
44GO:0031012: extracellular matrix1.21E-02
45GO:0005887: integral component of plasma membrane1.25E-02
46GO:0005750: mitochondrial respiratory chain complex III1.32E-02
47GO:0005795: Golgi stack1.43E-02
48GO:0005741: mitochondrial outer membrane1.91E-02
49GO:0005905: clathrin-coated pit1.91E-02
50GO:0030136: clathrin-coated vesicle2.43E-02
51GO:0016020: membrane2.80E-02
52GO:0019898: extrinsic component of membrane3.00E-02
53GO:0016592: mediator complex3.30E-02
54GO:0005759: mitochondrial matrix3.49E-02
55GO:0032580: Golgi cisterna membrane3.61E-02
56GO:0000932: P-body4.09E-02
57GO:0005730: nucleolus4.38E-02
58GO:0000151: ubiquitin ligase complex4.93E-02
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Gene type



Gene DE type