co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G14970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
3	GO:0090470: shoot organ boundary specification	0.00E+00
4	GO:0061635: regulation of protein complex stability	0.00E+00
5	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
6	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
7	GO:0009773: photosynthetic electron transport in photosystem I	1.04E-13
8	GO:0015979: photosynthesis	8.35E-06
9	GO:0019252: starch biosynthetic process	9.07E-06
10	GO:0010205: photoinhibition	9.61E-06
11	GO:0010027: thylakoid membrane organization	2.28E-05
12	GO:0010021: amylopectin biosynthetic process	3.35E-05
13	GO:0015994: chlorophyll metabolic process	3.35E-05
14	GO:0010304: PSII associated light-harvesting complex II catabolic process	7.90E-05
15	GO:0009644: response to high light intensity	1.13E-04
16	GO:0030091: protein repair	1.85E-04
17	GO:1904966: positive regulation of vitamin E biosynthetic process	2.16E-04
18	GO:1904964: positive regulation of phytol biosynthetic process	2.16E-04
19	GO:0080051: cutin transport	2.16E-04
20	GO:0065002: intracellular protein transmembrane transport	2.16E-04
21	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.16E-04
22	GO:0043953: protein transport by the Tat complex	2.16E-04
23	GO:0071277: cellular response to calcium ion	2.16E-04
24	GO:0010206: photosystem II repair	2.78E-04
25	GO:0018298: protein-chromophore linkage	4.80E-04
26	GO:0016122: xanthophyll metabolic process	4.81E-04
27	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.81E-04
28	GO:0009915: phloem sucrose loading	4.81E-04
29	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.81E-04
30	GO:0015908: fatty acid transport	4.81E-04
31	GO:0034755: iron ion transmembrane transport	4.81E-04
32	GO:0080005: photosystem stoichiometry adjustment	4.81E-04
33	GO:0005983: starch catabolic process	5.15E-04
34	GO:0006094: gluconeogenesis	5.83E-04
35	GO:0010207: photosystem II assembly	6.57E-04
36	GO:0006954: inflammatory response	7.83E-04
37	GO:0051604: protein maturation	7.83E-04
38	GO:0016050: vesicle organization	7.83E-04
39	GO:1902448: positive regulation of shade avoidance	7.83E-04
40	GO:0006000: fructose metabolic process	7.83E-04
41	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.12E-03
42	GO:0010371: regulation of gibberellin biosynthetic process	1.12E-03
43	GO:0071484: cellular response to light intensity	1.12E-03
44	GO:0009152: purine ribonucleotide biosynthetic process	1.12E-03
45	GO:0046653: tetrahydrofolate metabolic process	1.12E-03
46	GO:0080170: hydrogen peroxide transmembrane transport	1.12E-03
47	GO:0010222: stem vascular tissue pattern formation	1.48E-03
48	GO:0009765: photosynthesis, light harvesting	1.48E-03
49	GO:0006109: regulation of carbohydrate metabolic process	1.48E-03
50	GO:0045727: positive regulation of translation	1.48E-03
51	GO:0009735: response to cytokinin	1.74E-03
52	GO:0032543: mitochondrial translation	1.89E-03
53	GO:0010117: photoprotection	1.89E-03
54	GO:0080110: sporopollenin biosynthetic process	1.89E-03
55	GO:0042549: photosystem II stabilization	2.33E-03
56	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.33E-03
57	GO:0016554: cytidine to uridine editing	2.33E-03
58	GO:0009913: epidermal cell differentiation	2.33E-03
59	GO:0010189: vitamin E biosynthetic process	2.80E-03
60	GO:0055085: transmembrane transport	3.10E-03
61	GO:0009645: response to low light intensity stimulus	3.30E-03
62	GO:0009395: phospholipid catabolic process	3.30E-03
63	GO:0009704: de-etiolation	3.82E-03
64	GO:0010492: maintenance of shoot apical meristem identity	3.82E-03
65	GO:0016559: peroxisome fission	3.82E-03
66	GO:0034968: histone lysine methylation	3.82E-03
67	GO:0048564: photosystem I assembly	3.82E-03
68	GO:0008610: lipid biosynthetic process	3.82E-03
69	GO:0005978: glycogen biosynthetic process	3.82E-03
70	GO:0009642: response to light intensity	3.82E-03
71	GO:0007623: circadian rhythm	4.02E-03
72	GO:0032544: plastid translation	4.38E-03
73	GO:0017004: cytochrome complex assembly	4.38E-03
74	GO:0006002: fructose 6-phosphate metabolic process	4.38E-03
75	GO:0071482: cellular response to light stimulus	4.38E-03
76	GO:0090333: regulation of stomatal closure	4.95E-03
77	GO:0000373: Group II intron splicing	4.95E-03
78	GO:0048507: meristem development	4.95E-03
79	GO:0005982: starch metabolic process	5.56E-03
80	GO:0009638: phototropism	5.56E-03
81	GO:1900865: chloroplast RNA modification	5.56E-03
82	GO:0043085: positive regulation of catalytic activity	6.84E-03
83	GO:0006879: cellular iron ion homeostasis	6.84E-03
84	GO:0016485: protein processing	6.84E-03
85	GO:0000038: very long-chain fatty acid metabolic process	6.84E-03
86	GO:0008285: negative regulation of cell proliferation	6.84E-03
87	GO:0010628: positive regulation of gene expression	8.22E-03
88	GO:0005986: sucrose biosynthetic process	8.22E-03
89	GO:0010588: cotyledon vascular tissue pattern formation	8.22E-03
90	GO:0009785: blue light signaling pathway	8.22E-03
91	GO:0009266: response to temperature stimulus	8.94E-03
92	GO:0010020: chloroplast fission	8.94E-03
93	GO:0006364: rRNA processing	8.94E-03
94	GO:0019253: reductive pentose-phosphate cycle	8.94E-03
95	GO:0071732: cellular response to nitric oxide	9.69E-03
96	GO:0080188: RNA-directed DNA methylation	9.69E-03
97	GO:0005985: sucrose metabolic process	9.69E-03
98	GO:0010025: wax biosynthetic process	1.05E-02
99	GO:0006636: unsaturated fatty acid biosynthetic process	1.05E-02
100	GO:0009833: plant-type primary cell wall biogenesis	1.05E-02
101	GO:0006833: water transport	1.05E-02
102	GO:0009768: photosynthesis, light harvesting in photosystem I	1.21E-02
103	GO:0010073: meristem maintenance	1.21E-02
104	GO:0008299: isoprenoid biosynthetic process	1.21E-02
105	GO:0006418: tRNA aminoacylation for protein translation	1.21E-02
106	GO:0035428: hexose transmembrane transport	1.37E-02
107	GO:0016226: iron-sulfur cluster assembly	1.37E-02
108	GO:0005975: carbohydrate metabolic process	1.45E-02
109	GO:0009294: DNA mediated transformation	1.46E-02
110	GO:0071369: cellular response to ethylene stimulus	1.46E-02
111	GO:0010227: floral organ abscission	1.46E-02
112	GO:0055114: oxidation-reduction process	1.51E-02
113	GO:0010584: pollen exine formation	1.55E-02
114	GO:0008152: metabolic process	1.71E-02
115	GO:0034220: ion transmembrane transport	1.74E-02
116	GO:0042335: cuticle development	1.74E-02
117	GO:0006508: proteolysis	1.78E-02
118	GO:0006662: glycerol ether metabolic process	1.83E-02
119	GO:0046323: glucose import	1.83E-02
120	GO:0048544: recognition of pollen	1.93E-02
121	GO:0006814: sodium ion transport	1.93E-02
122	GO:0006633: fatty acid biosynthetic process	2.01E-02
123	GO:0016032: viral process	2.23E-02
124	GO:0030163: protein catabolic process	2.33E-02
125	GO:0071281: cellular response to iron ion	2.33E-02
126	GO:0006979: response to oxidative stress	2.39E-02
127	GO:0009567: double fertilization forming a zygote and endosperm	2.44E-02
128	GO:0007166: cell surface receptor signaling pathway	2.53E-02
129	GO:0071805: potassium ion transmembrane transport	2.54E-02
130	GO:0009416: response to light stimulus	3.11E-02
131	GO:0030244: cellulose biosynthetic process	3.34E-02
132	GO:0009658: chloroplast organization	3.42E-02
133	GO:0000160: phosphorelay signal transduction system	3.46E-02
134	GO:0009409: response to cold	3.68E-02
135	GO:0009853: photorespiration	3.95E-02
136	GO:0034599: cellular response to oxidative stress	4.07E-02
137	GO:0006810: transport	4.13E-02
138	GO:0080167: response to karrikin	4.23E-02
139	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.38E-02
140	GO:0006631: fatty acid metabolic process	4.46E-02
141	GO:0051707: response to other organism	4.73E-02
142	GO:0009640: photomorphogenesis	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0004823: leucine-tRNA ligase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
4	GO:0010303: limit dextrinase activity	0.00E+00
5	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
6	GO:0009976: tocopherol cyclase activity	0.00E+00
7	GO:0051060: pullulanase activity	0.00E+00
8	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
9	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
10	GO:0009011: starch synthase activity	3.35E-05
11	GO:0004222: metalloendopeptidase activity	4.71E-05
12	GO:0004176: ATP-dependent peptidase activity	7.26E-05
13	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.10E-04
14	GO:0019203: carbohydrate phosphatase activity	2.16E-04
15	GO:0015245: fatty acid transporter activity	2.16E-04
16	GO:0035671: enone reductase activity	2.16E-04
17	GO:0050139: nicotinate-N-glucosyltransferase activity	2.16E-04
18	GO:0050308: sugar-phosphatase activity	2.16E-04
19	GO:0045485: omega-6 fatty acid desaturase activity	2.16E-04
20	GO:0004856: xylulokinase activity	2.16E-04
21	GO:0008237: metallopeptidase activity	2.91E-04
22	GO:0016168: chlorophyll binding	3.65E-04
23	GO:0047746: chlorophyllase activity	4.81E-04
24	GO:0009977: proton motive force dependent protein transmembrane transporter activity	4.81E-04
25	GO:0033201: alpha-1,4-glucan synthase activity	4.81E-04
26	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.81E-04
27	GO:0003844: 1,4-alpha-glucan branching enzyme activity	4.81E-04
28	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	7.83E-04
29	GO:0070402: NADPH binding	7.83E-04
30	GO:0008864: formyltetrahydrofolate deformylase activity	7.83E-04
31	GO:0043169: cation binding	7.83E-04
32	GO:0004373: glycogen (starch) synthase activity	7.83E-04
33	GO:0002161: aminoacyl-tRNA editing activity	7.83E-04
34	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.01E-03
35	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.12E-03
36	GO:0008508: bile acid:sodium symporter activity	1.12E-03
37	GO:0022891: substrate-specific transmembrane transporter activity	1.29E-03
38	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.48E-03
39	GO:0080032: methyl jasmonate esterase activity	1.48E-03
40	GO:0043495: protein anchor	1.48E-03
41	GO:0050662: coenzyme binding	1.89E-03
42	GO:0016853: isomerase activity	1.89E-03
43	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.89E-03
44	GO:0004556: alpha-amylase activity	2.33E-03
45	GO:2001070: starch binding	2.33E-03
46	GO:0004332: fructose-bisphosphate aldolase activity	2.33E-03
47	GO:0042578: phosphoric ester hydrolase activity	2.33E-03
48	GO:0019899: enzyme binding	3.30E-03
49	GO:0043022: ribosome binding	3.82E-03
50	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.95E-03
51	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	4.95E-03
52	GO:0042802: identical protein binding	5.46E-03
53	GO:0005381: iron ion transmembrane transporter activity	5.56E-03
54	GO:0008047: enzyme activator activity	6.18E-03
55	GO:0016788: hydrolase activity, acting on ester bonds	7.18E-03
56	GO:0004565: beta-galactosidase activity	8.22E-03
57	GO:0016787: hydrolase activity	8.92E-03
58	GO:0008266: poly(U) RNA binding	8.94E-03
59	GO:0008233: peptidase activity	9.02E-03
60	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.05E-02
61	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.05E-02
62	GO:0031409: pigment binding	1.05E-02
63	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.05E-02
64	GO:0051536: iron-sulfur cluster binding	1.12E-02
65	GO:0004857: enzyme inhibitor activity	1.12E-02
66	GO:0016491: oxidoreductase activity	1.13E-02
67	GO:0015079: potassium ion transmembrane transporter activity	1.21E-02
68	GO:0016760: cellulose synthase (UDP-forming) activity	1.46E-02
69	GO:0047134: protein-disulfide reductase activity	1.64E-02
70	GO:0004812: aminoacyl-tRNA ligase activity	1.64E-02
71	GO:0018024: histone-lysine N-methyltransferase activity	1.64E-02
72	GO:0009055: electron carrier activity	1.65E-02
73	GO:0005515: protein binding	1.73E-02
74	GO:0004791: thioredoxin-disulfide reductase activity	1.93E-02
75	GO:0005355: glucose transmembrane transporter activity	1.93E-02
76	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.06E-02
77	GO:0048038: quinone binding	2.12E-02
78	GO:0004518: nuclease activity	2.23E-02
79	GO:0000156: phosphorelay response regulator activity	2.33E-02
80	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.33E-02
81	GO:0016759: cellulose synthase activity	2.44E-02
82	GO:0046872: metal ion binding	2.56E-02
83	GO:0003824: catalytic activity	2.71E-02
84	GO:0015250: water channel activity	2.76E-02
85	GO:0004721: phosphoprotein phosphatase activity	3.10E-02
86	GO:0008236: serine-type peptidase activity	3.22E-02
87	GO:0008168: methyltransferase activity	3.29E-02
88	GO:0030145: manganese ion binding	3.70E-02
89	GO:0003993: acid phosphatase activity	4.07E-02
90	GO:0004672: protein kinase activity	4.13E-02
91	GO:0042393: histone binding	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0043235: receptor complex	0.00E+00
2	GO:0009575: chromoplast stroma	0.00E+00
3	GO:0009507: chloroplast	3.49E-41
4	GO:0009535: chloroplast thylakoid membrane	2.05E-22
5	GO:0009941: chloroplast envelope	2.31E-17
6	GO:0009534: chloroplast thylakoid	8.17E-17
7	GO:0009570: chloroplast stroma	1.05E-15
8	GO:0010287: plastoglobule	3.13E-06
9	GO:0009579: thylakoid	3.15E-06
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.07E-06
11	GO:0016021: integral component of membrane	1.30E-04
12	GO:0009501: amyloplast	1.85E-04
13	GO:0031361: integral component of thylakoid membrane	2.16E-04
14	GO:0009782: photosystem I antenna complex	2.16E-04
15	GO:0009706: chloroplast inner membrane	3.02E-04
16	GO:0009897: external side of plasma membrane	7.83E-04
17	GO:0033281: TAT protein transport complex	7.83E-04
18	GO:0042651: thylakoid membrane	9.92E-04
19	GO:0009526: plastid envelope	1.48E-03
20	GO:0055035: plastid thylakoid membrane	1.89E-03
21	GO:0009523: photosystem II	2.03E-03
22	GO:0010319: stromule	2.78E-03
23	GO:0031977: thylakoid lumen	6.11E-03
24	GO:0009508: plastid chromosome	8.22E-03
25	GO:0031969: chloroplast membrane	9.22E-03
26	GO:0030076: light-harvesting complex	9.69E-03
27	GO:0009654: photosystem II oxygen evolving complex	1.21E-02
28	GO:0016020: membrane	1.24E-02
29	GO:0000775: chromosome, centromeric region	1.37E-02
30	GO:0019898: extrinsic component of membrane	2.02E-02
31	GO:0048046: apoplast	2.45E-02
32	GO:0009295: nucleoid	2.54E-02
33	GO:0009707: chloroplast outer membrane	3.34E-02
34	GO:0000151: ubiquitin ligase complex	3.34E-02