Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009249: protein lipoylation0.00E+00
2GO:0042821: pyridoxal biosynthetic process0.00E+00
3GO:0005996: monosaccharide metabolic process0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0009106: lipoate metabolic process0.00E+00
6GO:0090042: tubulin deacetylation0.00E+00
7GO:0042820: vitamin B6 catabolic process0.00E+00
8GO:0009658: chloroplast organization2.04E-10
9GO:0019464: glycine decarboxylation via glycine cleavage system1.34E-07
10GO:0009773: photosynthetic electron transport in photosystem I1.75E-07
11GO:0006810: transport1.12E-06
12GO:0010275: NAD(P)H dehydrogenase complex assembly1.77E-06
13GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.50E-05
14GO:0009767: photosynthetic electron transport chain2.00E-05
15GO:0019253: reductive pentose-phosphate cycle2.45E-05
16GO:0006546: glycine catabolic process2.77E-05
17GO:0009853: photorespiration4.56E-05
18GO:0042026: protein refolding9.18E-05
19GO:0016117: carotenoid biosynthetic process9.70E-05
20GO:0048564: photosystem I assembly1.56E-04
21GO:0000023: maltose metabolic process1.93E-04
22GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process1.93E-04
23GO:0006438: valyl-tRNA aminoacylation1.93E-04
24GO:0009443: pyridoxal 5'-phosphate salvage1.93E-04
25GO:0071482: cellular response to light stimulus1.95E-04
26GO:0009657: plastid organization1.95E-04
27GO:0032544: plastid translation1.95E-04
28GO:0046686: response to cadmium ion2.85E-04
29GO:0018119: peptidyl-cysteine S-nitrosylation3.85E-04
30GO:0006415: translational termination3.85E-04
31GO:0080183: response to photooxidative stress4.33E-04
32GO:0030388: fructose 1,6-bisphosphate metabolic process4.33E-04
33GO:0009629: response to gravity4.33E-04
34GO:0007154: cell communication4.33E-04
35GO:0010020: chloroplast fission5.65E-04
36GO:0010207: photosystem II assembly5.65E-04
37GO:0090351: seedling development6.32E-04
38GO:0006696: ergosterol biosynthetic process7.06E-04
39GO:0006000: fructose metabolic process7.06E-04
40GO:0006518: peptide metabolic process7.06E-04
41GO:0009409: response to cold7.59E-04
42GO:0009768: photosynthesis, light harvesting in photosystem I8.55E-04
43GO:0061077: chaperone-mediated protein folding9.35E-04
44GO:0051085: chaperone mediated protein folding requiring cofactor1.01E-03
45GO:0010239: chloroplast mRNA processing1.01E-03
46GO:0033014: tetrapyrrole biosynthetic process1.01E-03
47GO:0010731: protein glutathionylation1.01E-03
48GO:0016556: mRNA modification1.01E-03
49GO:0043572: plastid fission1.01E-03
50GO:0080092: regulation of pollen tube growth1.02E-03
51GO:0006730: one-carbon metabolic process1.02E-03
52GO:0006542: glutamine biosynthetic process1.34E-03
53GO:0019676: ammonia assimilation cycle1.34E-03
54GO:0051781: positive regulation of cell division1.34E-03
55GO:0045727: positive regulation of translation1.34E-03
56GO:0071483: cellular response to blue light1.34E-03
57GO:0009902: chloroplast relocation1.34E-03
58GO:0042631: cellular response to water deprivation1.40E-03
59GO:0006461: protein complex assembly1.70E-03
60GO:0009107: lipoate biosynthetic process1.70E-03
61GO:1902183: regulation of shoot apical meristem development1.70E-03
62GO:0016123: xanthophyll biosynthetic process1.70E-03
63GO:0006544: glycine metabolic process1.70E-03
64GO:0010236: plastoquinone biosynthetic process1.70E-03
65GO:0015979: photosynthesis1.82E-03
66GO:0006563: L-serine metabolic process2.10E-03
67GO:0042549: photosystem II stabilization2.10E-03
68GO:0010190: cytochrome b6f complex assembly2.10E-03
69GO:0009854: oxidative photosynthetic carbon pathway2.52E-03
70GO:0006458: 'de novo' protein folding2.52E-03
71GO:0010196: nonphotochemical quenching2.96E-03
72GO:0009645: response to low light intensity stimulus2.96E-03
73GO:0007623: circadian rhythm3.29E-03
74GO:0016559: peroxisome fission3.43E-03
75GO:0008610: lipid biosynthetic process3.43E-03
76GO:0009704: de-etiolation3.43E-03
77GO:0018298: protein-chromophore linkage3.47E-03
78GO:0017004: cytochrome complex assembly3.93E-03
79GO:0006002: fructose 6-phosphate metabolic process3.93E-03
80GO:0006075: (1->3)-beta-D-glucan biosynthetic process3.93E-03
81GO:0010100: negative regulation of photomorphogenesis3.93E-03
82GO:0010206: photosystem II repair4.44E-03
83GO:2000024: regulation of leaf development4.44E-03
84GO:0006783: heme biosynthetic process4.44E-03
85GO:0006779: porphyrin-containing compound biosynthetic process4.99E-03
86GO:0035999: tetrahydrofolate interconversion4.99E-03
87GO:1900865: chloroplast RNA modification4.99E-03
88GO:0006631: fatty acid metabolic process5.22E-03
89GO:0006535: cysteine biosynthetic process from serine5.55E-03
90GO:0009735: response to cytokinin5.61E-03
91GO:0009744: response to sucrose5.66E-03
92GO:0019684: photosynthesis, light reaction6.13E-03
93GO:0006352: DNA-templated transcription, initiation6.13E-03
94GO:0000272: polysaccharide catabolic process6.13E-03
95GO:0009636: response to toxic substance6.36E-03
96GO:0009416: response to light stimulus6.43E-03
97GO:0005983: starch catabolic process6.73E-03
98GO:0045037: protein import into chloroplast stroma6.73E-03
99GO:0006094: gluconeogenesis7.36E-03
100GO:0005986: sucrose biosynthetic process7.36E-03
101GO:0006006: glucose metabolic process7.36E-03
102GO:0080167: response to karrikin7.54E-03
103GO:0007031: peroxisome organization8.67E-03
104GO:0042343: indole glucosinolate metabolic process8.67E-03
105GO:0006096: glycolytic process9.03E-03
106GO:0019344: cysteine biosynthetic process1.01E-02
107GO:0009944: polarity specification of adaxial/abaxial axis1.01E-02
108GO:0006289: nucleotide-excision repair1.01E-02
109GO:0016575: histone deacetylation1.08E-02
110GO:0006418: tRNA aminoacylation for protein translation1.08E-02
111GO:0098542: defense response to other organism1.15E-02
112GO:0007005: mitochondrion organization1.23E-02
113GO:0016226: iron-sulfur cluster assembly1.23E-02
114GO:0008360: regulation of cell shape1.63E-02
115GO:0006814: sodium ion transport1.72E-02
116GO:0019252: starch biosynthetic process1.81E-02
117GO:0009791: post-embryonic development1.81E-02
118GO:0080156: mitochondrial mRNA modification1.90E-02
119GO:0007264: small GTPase mediated signal transduction1.99E-02
120GO:1901657: glycosyl compound metabolic process2.08E-02
121GO:0009793: embryo development ending in seed dormancy2.26E-02
122GO:0010286: heat acclimation2.27E-02
123GO:0010027: thylakoid membrane organization2.47E-02
124GO:0009627: systemic acquired resistance2.67E-02
125GO:0042128: nitrate assimilation2.67E-02
126GO:0008219: cell death2.98E-02
127GO:0009817: defense response to fungus, incompatible interaction2.98E-02
128GO:0009407: toxin catabolic process3.20E-02
129GO:0010218: response to far red light3.20E-02
130GO:0007568: aging3.31E-02
131GO:0005975: carbohydrate metabolic process3.45E-02
132GO:0006457: protein folding3.52E-02
133GO:0009637: response to blue light3.53E-02
134GO:0016051: carbohydrate biosynthetic process3.53E-02
135GO:0006508: proteolysis3.63E-02
136GO:0046777: protein autophosphorylation3.87E-02
137GO:0010114: response to red light4.23E-02
138GO:0045454: cell redox homeostasis4.32E-02
139GO:0009644: response to high light intensity4.47E-02
140GO:0006855: drug transmembrane transport4.71E-02
141GO:0042538: hyperosmotic salinity response4.96E-02
RankGO TermAdjusted P value
1GO:0008465: glycerate dehydrogenase activity0.00E+00
2GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
3GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
4GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
5GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
6GO:0005363: maltose transmembrane transporter activity0.00E+00
7GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
8GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
9GO:0051721: protein phosphatase 2A binding0.00E+00
10GO:0042903: tubulin deacetylase activity0.00E+00
11GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
12GO:0046905: phytoene synthase activity0.00E+00
13GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
14GO:0043014: alpha-tubulin binding0.00E+00
15GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.77E-06
16GO:0004375: glycine dehydrogenase (decarboxylating) activity1.50E-05
17GO:0016149: translation release factor activity, codon specific1.50E-05
18GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.77E-05
19GO:0004222: metalloendopeptidase activity3.47E-05
20GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.18E-05
21GO:0004033: aldo-keto reductase (NADP) activity1.56E-04
22GO:0003867: 4-aminobutyrate transaminase activity1.93E-04
23GO:0009496: plastoquinol--plastocyanin reductase activity1.93E-04
24GO:0004325: ferrochelatase activity1.93E-04
25GO:0051996: squalene synthase activity1.93E-04
26GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity1.93E-04
27GO:0004832: valine-tRNA ligase activity1.93E-04
28GO:0051082: unfolded protein binding2.33E-04
29GO:0003747: translation release factor activity2.36E-04
30GO:0044183: protein binding involved in protein folding3.85E-04
31GO:0005089: Rho guanyl-nucleotide exchange factor activity3.85E-04
32GO:0050017: L-3-cyanoalanine synthase activity4.33E-04
33GO:0010291: carotene beta-ring hydroxylase activity4.33E-04
34GO:0017118: lipoyltransferase activity4.33E-04
35GO:0004618: phosphoglycerate kinase activity4.33E-04
36GO:0010297: heteropolysaccharide binding4.33E-04
37GO:0016415: octanoyltransferase activity4.33E-04
38GO:0004047: aminomethyltransferase activity4.33E-04
39GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.33E-04
40GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity4.33E-04
41GO:0008967: phosphoglycolate phosphatase activity4.33E-04
42GO:0004310: farnesyl-diphosphate farnesyltransferase activity4.33E-04
43GO:0031072: heat shock protein binding5.01E-04
44GO:0008266: poly(U) RNA binding5.65E-04
45GO:0031409: pigment binding7.02E-04
46GO:0070402: NADPH binding7.06E-04
47GO:0070330: aromatase activity7.06E-04
48GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity7.06E-04
49GO:0032947: protein complex scaffold7.06E-04
50GO:0004148: dihydrolipoyl dehydrogenase activity7.06E-04
51GO:0005528: FK506 binding7.77E-04
52GO:0051537: 2 iron, 2 sulfur cluster binding8.08E-04
53GO:0005198: structural molecule activity8.48E-04
54GO:0004300: enoyl-CoA hydratase activity1.01E-03
55GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.01E-03
56GO:0008508: bile acid:sodium symporter activity1.01E-03
57GO:0048487: beta-tubulin binding1.01E-03
58GO:0001053: plastid sigma factor activity1.34E-03
59GO:0016987: sigma factor activity1.34E-03
60GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.34E-03
61GO:0004356: glutamate-ammonia ligase activity1.70E-03
62GO:0008374: O-acyltransferase activity1.70E-03
63GO:0004372: glycine hydroxymethyltransferase activity1.70E-03
64GO:0018685: alkane 1-monooxygenase activity1.70E-03
65GO:0048038: quinone binding1.85E-03
66GO:0080030: methyl indole-3-acetate esterase activity2.10E-03
67GO:0042578: phosphoric ester hydrolase activity2.10E-03
68GO:0008237: metallopeptidase activity2.38E-03
69GO:0004124: cysteine synthase activity2.52E-03
70GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.52E-03
71GO:0016168: chlorophyll binding2.82E-03
72GO:0043295: glutathione binding2.96E-03
73GO:0008135: translation factor activity, RNA binding3.93E-03
74GO:0003843: 1,3-beta-D-glucan synthase activity3.93E-03
75GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.93E-03
76GO:0004364: glutathione transferase activity5.44E-03
77GO:0015386: potassium:proton antiporter activity6.13E-03
78GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.60E-03
79GO:0051287: NAD binding6.85E-03
80GO:0051536: iron-sulfur cluster binding1.01E-02
81GO:0004407: histone deacetylase activity1.01E-02
82GO:0015079: potassium ion transmembrane transporter activity1.08E-02
83GO:0019825: oxygen binding1.10E-02
84GO:0004176: ATP-dependent peptidase activity1.15E-02
85GO:0003924: GTPase activity1.24E-02
86GO:0019843: rRNA binding1.36E-02
87GO:0004519: endonuclease activity1.38E-02
88GO:0003756: protein disulfide isomerase activity1.39E-02
89GO:0004812: aminoacyl-tRNA ligase activity1.47E-02
90GO:0030170: pyridoxal phosphate binding1.52E-02
91GO:0005515: protein binding1.60E-02
92GO:0005509: calcium ion binding1.65E-02
93GO:0050662: coenzyme binding1.72E-02
94GO:0005506: iron ion binding1.82E-02
95GO:0004518: nuclease activity1.99E-02
96GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.08E-02
97GO:0008483: transaminase activity2.27E-02
98GO:0016597: amino acid binding2.37E-02
99GO:0042802: identical protein binding2.40E-02
100GO:0009931: calcium-dependent protein serine/threonine kinase activity2.67E-02
101GO:0004683: calmodulin-dependent protein kinase activity2.77E-02
102GO:0102483: scopolin beta-glucosidase activity2.77E-02
103GO:0008236: serine-type peptidase activity2.88E-02
104GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding2.88E-02
105GO:0015238: drug transmembrane transporter activity3.09E-02
106GO:0050897: cobalt ion binding3.31E-02
107GO:0003746: translation elongation factor activity3.53E-02
108GO:0000987: core promoter proximal region sequence-specific DNA binding3.64E-02
109GO:0008422: beta-glucosidase activity3.76E-02
110GO:0050661: NADP binding3.87E-02
111GO:0043621: protein self-association4.47E-02
112GO:0005525: GTP binding4.72E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
2GO:0009571: proplastid stroma0.00E+00
3GO:0009507: chloroplast2.88E-52
4GO:0009535: chloroplast thylakoid membrane2.57E-27
5GO:0009941: chloroplast envelope7.54E-23
6GO:0009570: chloroplast stroma1.50E-16
7GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.67E-12
8GO:0009579: thylakoid8.28E-10
9GO:0009543: chloroplast thylakoid lumen4.23E-09
10GO:0010319: stromule8.52E-09
11GO:0009534: chloroplast thylakoid1.23E-08
12GO:0031969: chloroplast membrane2.15E-07
13GO:0030095: chloroplast photosystem II4.50E-07
14GO:0005960: glycine cleavage complex1.50E-05
15GO:0010287: plastoglobule3.13E-05
16GO:0009654: photosystem II oxygen evolving complex4.93E-05
17GO:0048046: apoplast6.01E-05
18GO:0019898: extrinsic component of membrane1.50E-04
19GO:0009782: photosystem I antenna complex1.93E-04
20GO:0009706: chloroplast inner membrane2.33E-04
21GO:0000427: plastid-encoded plastid RNA polymerase complex4.33E-04
22GO:0030076: light-harvesting complex6.32E-04
23GO:0031977: thylakoid lumen6.61E-04
24GO:0042651: thylakoid membrane8.55E-04
25GO:0055035: plastid thylakoid membrane1.70E-03
26GO:0009512: cytochrome b6f complex1.70E-03
27GO:0009523: photosystem II1.73E-03
28GO:0009536: plastid2.18E-03
29GO:0009840: chloroplastic endopeptidase Clp complex2.52E-03
30GO:0005759: mitochondrial matrix2.92E-03
31GO:0009533: chloroplast stromal thylakoid2.96E-03
32GO:0009707: chloroplast outer membrane3.47E-03
33GO:0005779: integral component of peroxisomal membrane3.93E-03
34GO:0000148: 1,3-beta-D-glucan synthase complex3.93E-03
35GO:0016324: apical plasma membrane5.55E-03
36GO:0022626: cytosolic ribosome6.01E-03
37GO:0016020: membrane6.93E-03
38GO:0009508: plastid chromosome7.36E-03
39GO:0009532: plastid stroma1.15E-02
40GO:0005623: cell1.40E-02
41GO:0009522: photosystem I1.72E-02
42GO:0005778: peroxisomal membrane2.27E-02
43GO:0009295: nucleoid2.27E-02
44GO:0005777: peroxisome3.03E-02
45GO:0005819: spindle3.76E-02
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Gene type



Gene DE type