Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007638: mechanosensory behavior0.00E+00
2GO:0015739: sialic acid transport0.00E+00
3GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation0.00E+00
4GO:0071555: cell wall organization1.61E-07
5GO:0015780: nucleotide-sugar transport7.55E-05
6GO:0048640: negative regulation of developmental growth8.96E-05
7GO:0010442: guard cell morphogenesis8.96E-05
8GO:0042371: vitamin K biosynthetic process8.96E-05
9GO:1902458: positive regulation of stomatal opening8.96E-05
10GO:0071588: hydrogen peroxide mediated signaling pathway8.96E-05
11GO:0060627: regulation of vesicle-mediated transport8.96E-05
12GO:0042761: very long-chain fatty acid biosynthetic process9.17E-05
13GO:1903426: regulation of reactive oxygen species biosynthetic process2.12E-04
14GO:0052541: plant-type cell wall cellulose metabolic process2.12E-04
15GO:0042254: ribosome biogenesis2.13E-04
16GO:0010025: wax biosynthetic process2.49E-04
17GO:0042538: hyperosmotic salinity response2.53E-04
18GO:0019722: calcium-mediated signaling4.38E-04
19GO:0051016: barbed-end actin filament capping5.10E-04
20GO:0006168: adenine salvage5.10E-04
21GO:0006166: purine ribonucleoside salvage5.10E-04
22GO:0007231: osmosensory signaling pathway5.10E-04
23GO:0042335: cuticle development5.13E-04
24GO:0016132: brassinosteroid biosynthetic process6.76E-04
25GO:0006183: GTP biosynthetic process6.78E-04
26GO:0033500: carbohydrate homeostasis6.78E-04
27GO:0009956: radial pattern formation6.78E-04
28GO:0009765: photosynthesis, light harvesting6.78E-04
29GO:0006633: fatty acid biosynthetic process7.81E-04
30GO:0048359: mucilage metabolic process involved in seed coat development8.59E-04
31GO:0016120: carotene biosynthetic process8.59E-04
32GO:0046785: microtubule polymerization8.59E-04
33GO:0045038: protein import into chloroplast thylakoid membrane8.59E-04
34GO:0016123: xanthophyll biosynthetic process8.59E-04
35GO:0044209: AMP salvage8.59E-04
36GO:0007267: cell-cell signaling8.61E-04
37GO:0010358: leaf shaping1.05E-03
38GO:0018258: protein O-linked glycosylation via hydroxyproline1.05E-03
39GO:0035435: phosphate ion transmembrane transport1.05E-03
40GO:0010405: arabinogalactan protein metabolic process1.05E-03
41GO:0030244: cellulose biosynthetic process1.24E-03
42GO:1901259: chloroplast rRNA processing1.25E-03
43GO:0006694: steroid biosynthetic process1.25E-03
44GO:0010019: chloroplast-nucleus signaling pathway1.25E-03
45GO:0009955: adaxial/abaxial pattern specification1.25E-03
46GO:0009834: plant-type secondary cell wall biogenesis1.36E-03
47GO:0006412: translation1.36E-03
48GO:0051693: actin filament capping1.46E-03
49GO:0009819: drought recovery1.69E-03
50GO:2000070: regulation of response to water deprivation1.69E-03
51GO:0009827: plant-type cell wall modification1.93E-03
52GO:0007186: G-protein coupled receptor signaling pathway1.93E-03
53GO:0032544: plastid translation1.93E-03
54GO:0009808: lignin metabolic process1.93E-03
55GO:0015996: chlorophyll catabolic process1.93E-03
56GO:0008643: carbohydrate transport2.16E-03
57GO:0000902: cell morphogenesis2.18E-03
58GO:0006869: lipid transport2.78E-03
59GO:0006816: calcium ion transport2.98E-03
60GO:0010015: root morphogenesis2.98E-03
61GO:0045037: protein import into chloroplast stroma3.26E-03
62GO:0010102: lateral root morphogenesis3.56E-03
63GO:0030036: actin cytoskeleton organization3.56E-03
64GO:0009725: response to hormone3.56E-03
65GO:0010143: cutin biosynthetic process3.86E-03
66GO:0009933: meristem structural organization3.86E-03
67GO:0010207: photosystem II assembly3.86E-03
68GO:0007015: actin filament organization3.86E-03
69GO:0009825: multidimensional cell growth4.18E-03
70GO:0070588: calcium ion transmembrane transport4.18E-03
71GO:0009833: plant-type primary cell wall biogenesis4.50E-03
72GO:0006071: glycerol metabolic process4.50E-03
73GO:0006833: water transport4.50E-03
74GO:0010026: trichome differentiation5.17E-03
75GO:0007017: microtubule-based process5.17E-03
76GO:0051302: regulation of cell division5.17E-03
77GO:0061077: chaperone-mediated protein folding5.52E-03
78GO:0016998: cell wall macromolecule catabolic process5.52E-03
79GO:0030245: cellulose catabolic process5.87E-03
80GO:0009294: DNA mediated transformation6.23E-03
81GO:0016117: carotenoid biosynthetic process6.99E-03
82GO:0034220: ion transmembrane transport7.37E-03
83GO:0000413: protein peptidyl-prolyl isomerization7.37E-03
84GO:0045489: pectin biosynthetic process7.77E-03
85GO:0010305: leaf vascular tissue pattern formation7.77E-03
86GO:0010182: sugar mediated signaling pathway7.77E-03
87GO:0009741: response to brassinosteroid7.77E-03
88GO:0010268: brassinosteroid homeostasis7.77E-03
89GO:0007018: microtubule-based movement8.17E-03
90GO:0000302: response to reactive oxygen species8.99E-03
91GO:0010583: response to cyclopentenone9.42E-03
92GO:0007264: small GTPase mediated signal transduction9.42E-03
93GO:0009826: unidimensional cell growth9.73E-03
94GO:0010090: trichome morphogenesis9.85E-03
95GO:0016125: sterol metabolic process1.03E-02
96GO:0010027: thylakoid membrane organization1.17E-02
97GO:0016126: sterol biosynthetic process1.17E-02
98GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.21E-02
99GO:0010411: xyloglucan metabolic process1.31E-02
100GO:0016311: dephosphorylation1.36E-02
101GO:0010311: lateral root formation1.46E-02
102GO:0009832: plant-type cell wall biogenesis1.46E-02
103GO:0009631: cold acclimation1.56E-02
104GO:0007568: aging1.56E-02
105GO:0009867: jasmonic acid mediated signaling pathway1.66E-02
106GO:0034599: cellular response to oxidative stress1.72E-02
107GO:0006631: fatty acid metabolic process1.88E-02
108GO:0009744: response to sucrose1.99E-02
109GO:0042546: cell wall biogenesis2.05E-02
110GO:0006813: potassium ion transport2.46E-02
111GO:0051603: proteolysis involved in cellular protein catabolic process2.52E-02
112GO:0055114: oxidation-reduction process2.54E-02
113GO:0006857: oligopeptide transport2.58E-02
114GO:0005975: carbohydrate metabolic process2.76E-02
115GO:0009742: brassinosteroid mediated signaling pathway3.30E-02
116GO:0042744: hydrogen peroxide catabolic process4.07E-02
117GO:0006457: protein folding4.25E-02
RankGO TermAdjusted P value
1GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity0.00E+00
2GO:0045435: lycopene epsilon cyclase activity0.00E+00
3GO:0050613: delta14-sterol reductase activity0.00E+00
4GO:0015136: sialic acid transmembrane transporter activity0.00E+00
5GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity0.00E+00
6GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
7GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
8GO:0050614: delta24-sterol reductase activity0.00E+00
9GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
10GO:0019843: rRNA binding5.34E-05
11GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity8.96E-05
12GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity8.96E-05
13GO:0031957: very long-chain fatty acid-CoA ligase activity8.96E-05
14GO:0010012: steroid 22-alpha hydroxylase activity8.96E-05
15GO:0047259: glucomannan 4-beta-mannosyltransferase activity8.96E-05
16GO:0008805: carbon-monoxide oxygenase activity2.12E-04
17GO:0003938: IMP dehydrogenase activity2.12E-04
18GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.30E-04
19GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor5.10E-04
20GO:0003999: adenine phosphoribosyltransferase activity5.10E-04
21GO:0008097: 5S rRNA binding5.10E-04
22GO:1990137: plant seed peroxidase activity6.78E-04
23GO:0052793: pectin acetylesterase activity6.78E-04
24GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed6.78E-04
25GO:0003735: structural constituent of ribosome6.84E-04
26GO:0016759: cellulose synthase activity8.13E-04
27GO:0004040: amidase activity8.59E-04
28GO:0008289: lipid binding8.92E-04
29GO:0008017: microtubule binding9.26E-04
30GO:0004130: cytochrome-c peroxidase activity1.05E-03
31GO:0016688: L-ascorbate peroxidase activity1.05E-03
32GO:1990714: hydroxyproline O-galactosyltransferase activity1.05E-03
33GO:0102391: decanoate--CoA ligase activity1.25E-03
34GO:0051753: mannan synthase activity1.25E-03
35GO:0051920: peroxiredoxin activity1.25E-03
36GO:0004467: long-chain fatty acid-CoA ligase activity1.46E-03
37GO:0005338: nucleotide-sugar transmembrane transporter activity1.46E-03
38GO:0016209: antioxidant activity1.69E-03
39GO:0008889: glycerophosphodiester phosphodiesterase activity2.18E-03
40GO:0003777: microtubule motor activity2.96E-03
41GO:0003924: GTPase activity3.22E-03
42GO:0015114: phosphate ion transmembrane transporter activity3.56E-03
43GO:0004565: beta-galactosidase activity3.56E-03
44GO:0005262: calcium channel activity3.56E-03
45GO:0004725: protein tyrosine phosphatase activity4.50E-03
46GO:0005528: FK506 binding4.83E-03
47GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.86E-03
48GO:0008324: cation transmembrane transporter activity5.17E-03
49GO:0019706: protein-cysteine S-palmitoyltransferase activity5.52E-03
50GO:0008810: cellulase activity6.23E-03
51GO:0016760: cellulose synthase (UDP-forming) activity6.23E-03
52GO:0008514: organic anion transmembrane transporter activity6.61E-03
53GO:0004872: receptor activity8.58E-03
54GO:0016762: xyloglucan:xyloglucosyl transferase activity8.99E-03
55GO:0051015: actin filament binding9.85E-03
56GO:0016722: oxidoreductase activity, oxidizing metal ions1.07E-02
57GO:0005200: structural constituent of cytoskeleton1.07E-02
58GO:0016413: O-acetyltransferase activity1.12E-02
59GO:0015250: water channel activity1.17E-02
60GO:0005525: GTP binding1.25E-02
61GO:0016798: hydrolase activity, acting on glycosyl bonds1.31E-02
62GO:0052689: carboxylic ester hydrolase activity1.39E-02
63GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.56E-02
64GO:0030145: manganese ion binding1.56E-02
65GO:0004871: signal transducer activity1.58E-02
66GO:0003993: acid phosphatase activity1.72E-02
67GO:0005215: transporter activity1.85E-02
68GO:0004185: serine-type carboxypeptidase activity1.99E-02
69GO:0016757: transferase activity, transferring glycosyl groups2.36E-02
70GO:0045735: nutrient reservoir activity2.77E-02
71GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.84E-02
72GO:0004650: polygalacturonase activity2.96E-02
73GO:0030599: pectinesterase activity3.03E-02
74GO:0016758: transferase activity, transferring hexosyl groups3.64E-02
75GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.33E-02
76GO:0030246: carbohydrate binding4.42E-02
77GO:0005351: sugar:proton symporter activity4.59E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane9.68E-06
2GO:0046658: anchored component of plasma membrane1.21E-05
3GO:0048046: apoplast2.77E-05
4GO:0009941: chloroplast envelope6.71E-05
5GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex8.96E-05
6GO:0009923: fatty acid elongase complex8.96E-05
7GO:0005840: ribosome1.77E-04
8GO:0009570: chloroplast stroma1.92E-04
9GO:0008290: F-actin capping protein complex2.12E-04
10GO:0009507: chloroplast2.56E-04
11GO:0009505: plant-type cell wall2.64E-04
12GO:0005874: microtubule2.78E-04
13GO:0009579: thylakoid3.21E-04
14GO:0009534: chloroplast thylakoid3.27E-04
15GO:0009528: plastid inner membrane3.54E-04
16GO:0009543: chloroplast thylakoid lumen5.88E-04
17GO:0009527: plastid outer membrane6.78E-04
18GO:0005618: cell wall7.53E-04
19GO:0005886: plasma membrane8.83E-04
20GO:0005794: Golgi apparatus1.00E-03
21GO:0009506: plasmodesma1.27E-03
22GO:0000139: Golgi membrane1.39E-03
23GO:0009533: chloroplast stromal thylakoid1.46E-03
24GO:0016021: integral component of membrane1.62E-03
25GO:0031977: thylakoid lumen1.84E-03
26GO:0005811: lipid particle1.93E-03
27GO:0045298: tubulin complex2.18E-03
28GO:0005763: mitochondrial small ribosomal subunit2.18E-03
29GO:0005783: endoplasmic reticulum2.59E-03
30GO:0005802: trans-Golgi network2.61E-03
31GO:0055028: cortical microtubule2.70E-03
32GO:0005884: actin filament2.98E-03
33GO:0005768: endosome3.18E-03
34GO:0000311: plastid large ribosomal subunit3.26E-03
35GO:0009535: chloroplast thylakoid membrane3.36E-03
36GO:0030659: cytoplasmic vesicle membrane3.86E-03
37GO:0030176: integral component of endoplasmic reticulum membrane4.18E-03
38GO:0005576: extracellular region4.81E-03
39GO:0009532: plastid stroma5.52E-03
40GO:0005871: kinesin complex6.99E-03
41GO:0016020: membrane8.51E-03
42GO:0010319: stromule1.07E-02
43GO:0009707: chloroplast outer membrane1.41E-02
44GO:0015934: large ribosomal subunit1.56E-02
45GO:0005819: spindle1.77E-02
46GO:0005856: cytoskeleton2.16E-02
47GO:0005887: integral component of plasma membrane2.52E-02
48GO:0010287: plastoglobule3.57E-02
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Gene type



Gene DE type