Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0080053: response to phenylalanine0.00E+00
6GO:0080052: response to histidine0.00E+00
7GO:0006793: phosphorus metabolic process0.00E+00
8GO:0034976: response to endoplasmic reticulum stress2.71E-06
9GO:0046686: response to cadmium ion3.57E-06
10GO:0045454: cell redox homeostasis3.81E-06
11GO:0016998: cell wall macromolecule catabolic process5.34E-06
12GO:0006099: tricarboxylic acid cycle1.01E-05
13GO:0006979: response to oxidative stress1.95E-05
14GO:0006032: chitin catabolic process2.50E-05
15GO:0009617: response to bacterium4.69E-05
16GO:0006468: protein phosphorylation9.57E-05
17GO:0030026: cellular manganese ion homeostasis2.24E-04
18GO:0019276: UDP-N-acetylgalactosamine metabolic process2.87E-04
19GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine2.87E-04
20GO:0006047: UDP-N-acetylglucosamine metabolic process2.87E-04
21GO:1990641: response to iron ion starvation2.87E-04
22GO:0080173: male-female gamete recognition during double fertilization2.87E-04
23GO:0010421: hydrogen peroxide-mediated programmed cell death2.87E-04
24GO:0006562: proline catabolic process2.87E-04
25GO:0010482: regulation of epidermal cell division2.87E-04
26GO:0042964: thioredoxin reduction2.87E-04
27GO:0009699: phenylpropanoid biosynthetic process3.49E-04
28GO:0042742: defense response to bacterium4.05E-04
29GO:0046685: response to arsenic-containing substance4.20E-04
30GO:0006098: pentose-phosphate shunt4.20E-04
31GO:0051865: protein autoubiquitination4.20E-04
32GO:0030163: protein catabolic process4.24E-04
33GO:0055114: oxidation-reduction process4.75E-04
34GO:0051592: response to calcium ion6.30E-04
35GO:0010133: proline catabolic process to glutamate6.30E-04
36GO:0009805: coumarin biosynthetic process6.30E-04
37GO:0019521: D-gluconate metabolic process6.30E-04
38GO:0019374: galactolipid metabolic process6.30E-04
39GO:0006101: citrate metabolic process6.30E-04
40GO:0042939: tripeptide transport6.30E-04
41GO:1902000: homogentisate catabolic process6.30E-04
42GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.30E-04
43GO:0000272: polysaccharide catabolic process6.69E-04
44GO:0010200: response to chitin8.33E-04
45GO:0006626: protein targeting to mitochondrion8.67E-04
46GO:0009651: response to salt stress1.01E-03
47GO:0010351: lithium ion transport1.02E-03
48GO:0006011: UDP-glucose metabolic process1.02E-03
49GO:0010272: response to silver ion1.02E-03
50GO:0009072: aromatic amino acid family metabolic process1.02E-03
51GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.02E-03
52GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.02E-03
53GO:0034051: negative regulation of plant-type hypersensitive response1.02E-03
54GO:0006556: S-adenosylmethionine biosynthetic process1.02E-03
55GO:0046836: glycolipid transport1.46E-03
56GO:0019438: aromatic compound biosynthetic process1.46E-03
57GO:0048194: Golgi vesicle budding1.46E-03
58GO:0006107: oxaloacetate metabolic process1.46E-03
59GO:0006537: glutamate biosynthetic process1.46E-03
60GO:0033014: tetrapyrrole biosynthetic process1.46E-03
61GO:0006882: cellular zinc ion homeostasis1.46E-03
62GO:0001676: long-chain fatty acid metabolic process1.46E-03
63GO:0006874: cellular calcium ion homeostasis1.47E-03
64GO:0071456: cellular response to hypoxia1.77E-03
65GO:0010107: potassium ion import1.96E-03
66GO:0006621: protein retention in ER lumen1.96E-03
67GO:0033356: UDP-L-arabinose metabolic process1.96E-03
68GO:0051567: histone H3-K9 methylation1.96E-03
69GO:0006734: NADH metabolic process1.96E-03
70GO:0042938: dipeptide transport1.96E-03
71GO:0015031: protein transport2.34E-03
72GO:0006097: glyoxylate cycle2.50E-03
73GO:0000304: response to singlet oxygen2.50E-03
74GO:0009737: response to abscisic acid2.51E-03
75GO:0010405: arabinogalactan protein metabolic process3.08E-03
76GO:0043248: proteasome assembly3.08E-03
77GO:0018258: protein O-linked glycosylation via hydroxyproline3.08E-03
78GO:0002238: response to molecule of fungal origin3.08E-03
79GO:0010193: response to ozone3.26E-03
80GO:0010555: response to mannitol3.71E-03
81GO:2000067: regulation of root morphogenesis3.71E-03
82GO:0071470: cellular response to osmotic stress3.71E-03
83GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.71E-03
84GO:0071281: cellular response to iron ion3.71E-03
85GO:0006880: intracellular sequestering of iron ion4.38E-03
86GO:1900056: negative regulation of leaf senescence4.38E-03
87GO:0019745: pentacyclic triterpenoid biosynthetic process4.38E-03
88GO:0042773: ATP synthesis coupled electron transport4.38E-03
89GO:0009611: response to wounding4.41E-03
90GO:0009615: response to virus4.70E-03
91GO:0006102: isocitrate metabolic process5.08E-03
92GO:0006644: phospholipid metabolic process5.08E-03
93GO:0010928: regulation of auxin mediated signaling pathway5.08E-03
94GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.08E-03
95GO:0043068: positive regulation of programmed cell death5.08E-03
96GO:0006605: protein targeting5.08E-03
97GO:0050821: protein stabilization5.08E-03
98GO:0019430: removal of superoxide radicals5.82E-03
99GO:0007186: G-protein coupled receptor signaling pathway5.82E-03
100GO:0010262: somatic embryogenesis5.82E-03
101GO:0010120: camalexin biosynthetic process5.82E-03
102GO:0009751: response to salicylic acid6.30E-03
103GO:0040008: regulation of growth6.43E-03
104GO:0009821: alkaloid biosynthetic process6.60E-03
105GO:0006783: heme biosynthetic process6.60E-03
106GO:0006457: protein folding6.66E-03
107GO:0009407: toxin catabolic process6.77E-03
108GO:0010043: response to zinc ion7.10E-03
109GO:0010205: photoinhibition7.41E-03
110GO:0043067: regulation of programmed cell death7.41E-03
111GO:0030042: actin filament depolymerization7.41E-03
112GO:0048354: mucilage biosynthetic process involved in seed coat development7.41E-03
113GO:0007166: cell surface receptor signaling pathway8.09E-03
114GO:0055062: phosphate ion homeostasis8.26E-03
115GO:0007064: mitotic sister chromatid cohesion8.26E-03
116GO:0048765: root hair cell differentiation9.14E-03
117GO:0009682: induced systemic resistance9.14E-03
118GO:0009073: aromatic amino acid family biosynthetic process9.14E-03
119GO:0009750: response to fructose9.14E-03
120GO:0006631: fatty acid metabolic process9.26E-03
121GO:0006952: defense response9.82E-03
122GO:0012501: programmed cell death1.01E-02
123GO:0015706: nitrate transport1.01E-02
124GO:0002213: defense response to insect1.01E-02
125GO:0006094: gluconeogenesis1.10E-02
126GO:0006108: malate metabolic process1.10E-02
127GO:0006807: nitrogen compound metabolic process1.10E-02
128GO:2000028: regulation of photoperiodism, flowering1.10E-02
129GO:0009636: response to toxic substance1.13E-02
130GO:0010143: cutin biosynthetic process1.20E-02
131GO:0009846: pollen germination1.26E-02
132GO:0042538: hyperosmotic salinity response1.26E-02
133GO:0010053: root epidermal cell differentiation1.30E-02
134GO:0042343: indole glucosinolate metabolic process1.30E-02
135GO:0010167: response to nitrate1.30E-02
136GO:0006486: protein glycosylation1.36E-02
137GO:0010025: wax biosynthetic process1.40E-02
138GO:0009738: abscisic acid-activated signaling pathway1.46E-02
139GO:0000027: ribosomal large subunit assembly1.51E-02
140GO:0009863: salicylic acid mediated signaling pathway1.51E-02
141GO:0030150: protein import into mitochondrial matrix1.51E-02
142GO:0009555: pollen development1.53E-02
143GO:0006096: glycolytic process1.61E-02
144GO:0010026: trichome differentiation1.62E-02
145GO:0048316: seed development1.66E-02
146GO:0098542: defense response to other organism1.73E-02
147GO:0003333: amino acid transmembrane transport1.73E-02
148GO:0009620: response to fungus1.77E-02
149GO:0019748: secondary metabolic process1.85E-02
150GO:0030433: ubiquitin-dependent ERAD pathway1.85E-02
151GO:0006730: one-carbon metabolic process1.85E-02
152GO:0007005: mitochondrion organization1.85E-02
153GO:0009553: embryo sac development1.88E-02
154GO:0006012: galactose metabolic process1.96E-02
155GO:0009693: ethylene biosynthetic process1.96E-02
156GO:0019722: calcium-mediated signaling2.08E-02
157GO:0010118: stomatal movement2.33E-02
158GO:0009058: biosynthetic process2.56E-02
159GO:0006814: sodium ion transport2.59E-02
160GO:0009749: response to glucose2.72E-02
161GO:0009753: response to jasmonic acid2.79E-02
162GO:0000302: response to reactive oxygen species2.86E-02
163GO:0007264: small GTPase mediated signal transduction3.00E-02
164GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.74E-02
165GO:0009816: defense response to bacterium, incompatible interaction3.86E-02
166GO:0006508: proteolysis3.89E-02
167GO:0009627: systemic acquired resistance4.02E-02
168GO:0042128: nitrate assimilation4.02E-02
169GO:0015995: chlorophyll biosynthetic process4.17E-02
170GO:0016049: cell growth4.33E-02
171GO:0030244: cellulose biosynthetic process4.49E-02
172GO:0009832: plant-type cell wall biogenesis4.65E-02
173GO:0007568: aging4.97E-02
174GO:0048527: lateral root development4.97E-02
RankGO TermAdjusted P value
1GO:0016034: maleylacetoacetate isomerase activity0.00E+00
2GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
3GO:0004164: diphthine synthase activity0.00E+00
4GO:0051670: inulinase activity0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0050220: prostaglandin-E synthase activity0.00E+00
7GO:0005046: KDEL sequence binding0.00E+00
8GO:0003756: protein disulfide isomerase activity9.53E-06
9GO:0009055: electron carrier activity1.04E-05
10GO:0004568: chitinase activity2.50E-05
11GO:0004674: protein serine/threonine kinase activity4.06E-05
12GO:0005496: steroid binding8.61E-05
13GO:0102391: decanoate--CoA ligase activity1.71E-04
14GO:0004467: long-chain fatty acid-CoA ligase activity2.24E-04
15GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.87E-04
16GO:0051669: fructan beta-fructosidase activity2.87E-04
17GO:0004657: proline dehydrogenase activity2.87E-04
18GO:0004325: ferrochelatase activity2.87E-04
19GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.87E-04
20GO:0031219: levanase activity2.87E-04
21GO:0031957: very long-chain fatty acid-CoA ligase activity2.87E-04
22GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.87E-04
23GO:0005524: ATP binding5.15E-04
24GO:0004103: choline kinase activity6.30E-04
25GO:0004634: phosphopyruvate hydratase activity6.30E-04
26GO:0003994: aconitate hydratase activity6.30E-04
27GO:0004775: succinate-CoA ligase (ADP-forming) activity6.30E-04
28GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity6.30E-04
29GO:0050736: O-malonyltransferase activity6.30E-04
30GO:0015036: disulfide oxidoreductase activity6.30E-04
31GO:0048531: beta-1,3-galactosyltransferase activity6.30E-04
32GO:0042937: tripeptide transporter activity6.30E-04
33GO:0004776: succinate-CoA ligase (GDP-forming) activity6.30E-04
34GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.65E-04
35GO:0004478: methionine adenosyltransferase activity1.02E-03
36GO:0001664: G-protein coupled receptor binding1.02E-03
37GO:0005093: Rab GDP-dissociation inhibitor activity1.02E-03
38GO:0008430: selenium binding1.02E-03
39GO:0031683: G-protein beta/gamma-subunit complex binding1.02E-03
40GO:0016805: dipeptidase activity1.02E-03
41GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.02E-03
42GO:0004190: aspartic-type endopeptidase activity1.09E-03
43GO:0008061: chitin binding1.09E-03
44GO:0017089: glycolipid transporter activity1.46E-03
45GO:0004108: citrate (Si)-synthase activity1.46E-03
46GO:0042299: lupeol synthase activity1.46E-03
47GO:0016301: kinase activity1.95E-03
48GO:0015368: calcium:cation antiporter activity1.96E-03
49GO:0004737: pyruvate decarboxylase activity1.96E-03
50GO:0042936: dipeptide transporter activity1.96E-03
51GO:0051861: glycolipid binding1.96E-03
52GO:0015369: calcium:proton antiporter activity1.96E-03
53GO:0046923: ER retention sequence binding1.96E-03
54GO:0016866: intramolecular transferase activity1.96E-03
55GO:0004040: amidase activity2.50E-03
56GO:0004866: endopeptidase inhibitor activity3.08E-03
57GO:0030976: thiamine pyrophosphate binding3.08E-03
58GO:1990714: hydroxyproline O-galactosyltransferase activity3.08E-03
59GO:0004332: fructose-bisphosphate aldolase activity3.08E-03
60GO:0047714: galactolipase activity3.08E-03
61GO:0004029: aldehyde dehydrogenase (NAD) activity3.08E-03
62GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity3.08E-03
63GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity3.08E-03
64GO:0016615: malate dehydrogenase activity3.08E-03
65GO:0015035: protein disulfide oxidoreductase activity3.53E-03
66GO:0019900: kinase binding3.71E-03
67GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.71E-03
68GO:0004012: phospholipid-translocating ATPase activity3.71E-03
69GO:0030060: L-malate dehydrogenase activity3.71E-03
70GO:0003978: UDP-glucose 4-epimerase activity3.71E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity3.71E-03
72GO:0005509: calcium ion binding3.89E-03
73GO:0005515: protein binding4.11E-03
74GO:0008237: metallopeptidase activity4.19E-03
75GO:0016831: carboxy-lyase activity4.38E-03
76GO:0008235: metalloexopeptidase activity4.38E-03
77GO:0004620: phospholipase activity4.38E-03
78GO:0004714: transmembrane receptor protein tyrosine kinase activity5.08E-03
79GO:0052747: sinapyl alcohol dehydrogenase activity5.08E-03
80GO:0015491: cation:cation antiporter activity5.08E-03
81GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.82E-03
82GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity6.14E-03
83GO:0030246: carbohydrate binding7.13E-03
84GO:0016844: strictosidine synthase activity7.41E-03
85GO:0015112: nitrate transmembrane transporter activity7.41E-03
86GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.41E-03
87GO:0005381: iron ion transmembrane transporter activity7.41E-03
88GO:0005384: manganese ion transmembrane transporter activity7.41E-03
89GO:0047617: acyl-CoA hydrolase activity7.41E-03
90GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.78E-03
91GO:0005507: copper ion binding7.87E-03
92GO:0008171: O-methyltransferase activity8.26E-03
93GO:0004713: protein tyrosine kinase activity8.26E-03
94GO:0051539: 4 iron, 4 sulfur cluster binding8.87E-03
95GO:0004177: aminopeptidase activity9.14E-03
96GO:0008794: arsenate reductase (glutaredoxin) activity9.14E-03
97GO:0004364: glutathione transferase activity9.65E-03
98GO:0008378: galactosyltransferase activity1.01E-02
99GO:0045551: cinnamyl-alcohol dehydrogenase activity1.01E-02
100GO:0015266: protein channel activity1.10E-02
101GO:0004022: alcohol dehydrogenase (NAD) activity1.10E-02
102GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.10E-02
103GO:0005198: structural molecule activity1.13E-02
104GO:0000287: magnesium ion binding1.16E-02
105GO:0004970: ionotropic glutamate receptor activity1.30E-02
106GO:0005217: intracellular ligand-gated ion channel activity1.30E-02
107GO:0050660: flavin adenine dinucleotide binding1.43E-02
108GO:0051536: iron-sulfur cluster binding1.51E-02
109GO:0031418: L-ascorbic acid binding1.51E-02
110GO:0003954: NADH dehydrogenase activity1.51E-02
111GO:0004298: threonine-type endopeptidase activity1.73E-02
112GO:0016779: nucleotidyltransferase activity1.85E-02
113GO:0016740: transferase activity2.07E-02
114GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.16E-02
115GO:0016758: transferase activity, transferring hexosyl groups2.36E-02
116GO:0004791: thioredoxin-disulfide reductase activity2.59E-02
117GO:0004872: receptor activity2.72E-02
118GO:0004672: protein kinase activity2.78E-02
119GO:0008137: NADH dehydrogenase (ubiquinone) activity2.86E-02
120GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.12E-02
121GO:0020037: heme binding3.13E-02
122GO:0051213: dioxygenase activity3.72E-02
123GO:0008194: UDP-glycosyltransferase activity3.74E-02
124GO:0009931: calcium-dependent protein serine/threonine kinase activity4.02E-02
125GO:0004683: calmodulin-dependent protein kinase activity4.17E-02
126GO:0004806: triglyceride lipase activity4.17E-02
127GO:0030247: polysaccharide binding4.17E-02
128GO:0005506: iron ion binding4.23E-02
129GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.33E-02
130GO:0005096: GTPase activator activity4.65E-02
131GO:0004222: metalloendopeptidase activity4.81E-02
132GO:0030145: manganese ion binding4.97E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005783: endoplasmic reticulum1.64E-11
4GO:0005886: plasma membrane2.04E-06
5GO:0005788: endoplasmic reticulum lumen5.67E-05
6GO:0005829: cytosol5.79E-05
7GO:0045252: oxoglutarate dehydrogenase complex2.87E-04
8GO:0000015: phosphopyruvate hydratase complex6.30E-04
9GO:0031314: extrinsic component of mitochondrial inner membrane6.30E-04
10GO:0008541: proteasome regulatory particle, lid subcomplex6.69E-04
11GO:0005789: endoplasmic reticulum membrane1.13E-03
12GO:0030660: Golgi-associated vesicle membrane1.96E-03
13GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.96E-03
14GO:0000502: proteasome complex2.17E-03
15GO:0010168: ER body3.08E-03
16GO:0005801: cis-Golgi network3.71E-03
17GO:0005737: cytoplasm3.76E-03
18GO:0016021: integral component of membrane4.01E-03
19GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.08E-03
20GO:0031305: integral component of mitochondrial inner membrane5.08E-03
21GO:0000326: protein storage vacuole5.82E-03
22GO:0019773: proteasome core complex, alpha-subunit complex5.82E-03
23GO:0005774: vacuolar membrane7.88E-03
24GO:0005740: mitochondrial envelope8.26E-03
25GO:0005765: lysosomal membrane9.14E-03
26GO:0031012: extracellular matrix1.10E-02
27GO:0031966: mitochondrial membrane1.26E-02
28GO:0005758: mitochondrial intermembrane space1.51E-02
29GO:0045271: respiratory chain complex I1.62E-02
30GO:0005839: proteasome core complex1.73E-02
31GO:0005741: mitochondrial outer membrane1.73E-02
32GO:0015629: actin cytoskeleton1.96E-02
33GO:0005744: mitochondrial inner membrane presequence translocase complex2.08E-02
34GO:0005773: vacuole2.09E-02
35GO:0048046: apoplast2.22E-02
36GO:0005623: cell2.49E-02
37GO:0005618: cell wall2.64E-02
38GO:0019898: extrinsic component of membrane2.72E-02
39GO:0005759: mitochondrial matrix3.05E-02
40GO:0032580: Golgi cisterna membrane3.28E-02
41GO:0009507: chloroplast3.73E-02
42GO:0005794: Golgi apparatus4.23E-02
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Gene type



Gene DE type