Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:0043201: response to leucine0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:0046109: uridine biosynthetic process0.00E+00
7GO:0080052: response to histidine0.00E+00
8GO:0080053: response to phenylalanine0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0006793: phosphorus metabolic process0.00E+00
11GO:0051238: sequestering of metal ion0.00E+00
12GO:0009617: response to bacterium1.78E-13
13GO:0042742: defense response to bacterium9.79E-12
14GO:0010120: camalexin biosynthetic process1.70E-07
15GO:0071456: cellular response to hypoxia2.29E-07
16GO:0009620: response to fungus7.41E-06
17GO:0009751: response to salicylic acid1.29E-05
18GO:0006468: protein phosphorylation1.75E-05
19GO:0009682: induced systemic resistance4.02E-05
20GO:0010150: leaf senescence4.31E-05
21GO:0006536: glutamate metabolic process6.44E-05
22GO:0000304: response to singlet oxygen1.01E-04
23GO:0009697: salicylic acid biosynthetic process1.01E-04
24GO:0050832: defense response to fungus1.20E-04
25GO:0006952: defense response1.35E-04
26GO:0006874: cellular calcium ion homeostasis1.43E-04
27GO:0016998: cell wall macromolecule catabolic process1.63E-04
28GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.00E-04
29GO:0055114: oxidation-reduction process2.05E-04
30GO:0019276: UDP-N-acetylgalactosamine metabolic process3.17E-04
31GO:0032107: regulation of response to nutrient levels3.17E-04
32GO:0051938: L-glutamate import3.17E-04
33GO:0006047: UDP-N-acetylglucosamine metabolic process3.17E-04
34GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.17E-04
35GO:0010421: hydrogen peroxide-mediated programmed cell death3.17E-04
36GO:0009700: indole phytoalexin biosynthetic process3.17E-04
37GO:0006569: tryptophan catabolic process3.17E-04
38GO:0046244: salicylic acid catabolic process3.17E-04
39GO:0030091: protein repair3.28E-04
40GO:0002229: defense response to oomycetes4.31E-04
41GO:0010112: regulation of systemic acquired resistance4.84E-04
42GO:0051607: defense response to virus6.43E-04
43GO:0006032: chitin catabolic process6.67E-04
44GO:0043091: L-arginine import6.92E-04
45GO:0051592: response to calcium ion6.92E-04
46GO:0080183: response to photooxidative stress6.92E-04
47GO:0015802: basic amino acid transport6.92E-04
48GO:0009805: coumarin biosynthetic process6.92E-04
49GO:0009866: induced systemic resistance, ethylene mediated signaling pathway6.92E-04
50GO:0030003: cellular cation homeostasis6.92E-04
51GO:0042939: tripeptide transport6.92E-04
52GO:0009816: defense response to bacterium, incompatible interaction7.42E-04
53GO:0009817: defense response to fungus, incompatible interaction9.64E-04
54GO:0010351: lithium ion transport1.12E-03
55GO:0006011: UDP-glucose metabolic process1.12E-03
56GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.12E-03
57GO:0015692: lead ion transport1.12E-03
58GO:0002237: response to molecule of bacterial origin1.12E-03
59GO:0080168: abscisic acid transport1.12E-03
60GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.12E-03
61GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.12E-03
62GO:0034051: negative regulation of plant-type hypersensitive response1.12E-03
63GO:0070588: calcium ion transmembrane transport1.25E-03
64GO:0009611: response to wounding1.57E-03
65GO:0006882: cellular zinc ion homeostasis1.61E-03
66GO:0046836: glycolipid transport1.61E-03
67GO:0019438: aromatic compound biosynthetic process1.61E-03
68GO:0033169: histone H3-K9 demethylation1.61E-03
69GO:0070301: cellular response to hydrogen peroxide1.61E-03
70GO:0002239: response to oomycetes1.61E-03
71GO:0009052: pentose-phosphate shunt, non-oxidative branch1.61E-03
72GO:0051707: response to other organism1.78E-03
73GO:0003333: amino acid transmembrane transport1.86E-03
74GO:0006979: response to oxidative stress1.94E-03
75GO:0019748: secondary metabolic process2.04E-03
76GO:0009636: response to toxic substance2.07E-03
77GO:0080142: regulation of salicylic acid biosynthetic process2.16E-03
78GO:0042938: dipeptide transport2.16E-03
79GO:0045227: capsule polysaccharide biosynthetic process2.16E-03
80GO:0033358: UDP-L-arabinose biosynthetic process2.16E-03
81GO:1901002: positive regulation of response to salt stress2.16E-03
82GO:0006855: drug transmembrane transport2.17E-03
83GO:0009625: response to insect2.22E-03
84GO:0045487: gibberellin catabolic process2.76E-03
85GO:0006561: proline biosynthetic process3.40E-03
86GO:0015691: cadmium ion transport3.40E-03
87GO:0010256: endomembrane system organization3.40E-03
88GO:0006555: methionine metabolic process3.40E-03
89GO:0009626: plant-type hypersensitive response3.50E-03
90GO:0010193: response to ozone3.76E-03
91GO:0010555: response to mannitol4.10E-03
92GO:2000067: regulation of root morphogenesis4.10E-03
93GO:0019509: L-methionine salvage from methylthioadenosine4.10E-03
94GO:0010200: response to chitin4.68E-03
95GO:1900056: negative regulation of leaf senescence4.84E-03
96GO:0019745: pentacyclic triterpenoid biosynthetic process4.84E-03
97GO:0050829: defense response to Gram-negative bacterium4.84E-03
98GO:0030026: cellular manganese ion homeostasis4.84E-03
99GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.84E-03
100GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.62E-03
101GO:0009627: systemic acquired resistance6.07E-03
102GO:0009699: phenylpropanoid biosynthetic process6.44E-03
103GO:0007186: G-protein coupled receptor signaling pathway6.44E-03
104GO:0010497: plasmodesmata-mediated intercellular transport6.44E-03
105GO:0010262: somatic embryogenesis6.44E-03
106GO:0010204: defense response signaling pathway, resistance gene-independent6.44E-03
107GO:0009407: toxin catabolic process7.83E-03
108GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.21E-03
109GO:2000280: regulation of root development8.21E-03
110GO:0048527: lateral root development8.22E-03
111GO:0045087: innate immune response9.01E-03
112GO:0009688: abscisic acid biosynthetic process9.15E-03
113GO:0010162: seed dormancy process9.15E-03
114GO:0055062: phosphate ion homeostasis9.15E-03
115GO:0007064: mitotic sister chromatid cohesion9.15E-03
116GO:0009870: defense response signaling pathway, resistance gene-dependent9.15E-03
117GO:0007166: cell surface receptor signaling pathway9.74E-03
118GO:0009737: response to abscisic acid9.83E-03
119GO:0000272: polysaccharide catabolic process1.01E-02
120GO:0009750: response to fructose1.01E-02
121GO:0009684: indoleacetic acid biosynthetic process1.01E-02
122GO:0006816: calcium ion transport1.01E-02
123GO:0052544: defense response by callose deposition in cell wall1.01E-02
124GO:0009089: lysine biosynthetic process via diaminopimelate1.01E-02
125GO:0009073: aromatic amino acid family biosynthetic process1.01E-02
126GO:0006631: fatty acid metabolic process1.07E-02
127GO:0006790: sulfur compound metabolic process1.11E-02
128GO:0002213: defense response to insect1.11E-02
129GO:0055046: microgametogenesis1.22E-02
130GO:0009718: anthocyanin-containing compound biosynthetic process1.22E-02
131GO:0010143: cutin biosynthetic process1.33E-02
132GO:0046854: phosphatidylinositol phosphorylation1.44E-02
133GO:0009969: xyloglucan biosynthetic process1.44E-02
134GO:0009225: nucleotide-sugar metabolic process1.44E-02
135GO:0042538: hyperosmotic salinity response1.46E-02
136GO:0006812: cation transport1.46E-02
137GO:0010025: wax biosynthetic process1.56E-02
138GO:0005992: trehalose biosynthetic process1.67E-02
139GO:0030150: protein import into mitochondrial matrix1.67E-02
140GO:0080147: root hair cell development1.67E-02
141GO:0080167: response to karrikin1.88E-02
142GO:0031348: negative regulation of defense response2.05E-02
143GO:0042545: cell wall modification2.18E-02
144GO:0006012: galactose metabolic process2.18E-02
145GO:0009686: gibberellin biosynthetic process2.18E-02
146GO:0009624: response to nematode2.24E-02
147GO:0009561: megagametogenesis2.31E-02
148GO:0007165: signal transduction2.49E-02
149GO:0009741: response to brassinosteroid2.73E-02
150GO:0006885: regulation of pH2.73E-02
151GO:0015031: protein transport2.79E-02
152GO:0006814: sodium ion transport2.88E-02
153GO:0042752: regulation of circadian rhythm2.88E-02
154GO:0048544: recognition of pollen2.88E-02
155GO:0032259: methylation2.91E-02
156GO:0006623: protein targeting to vacuole3.02E-02
157GO:0009749: response to glucose3.02E-02
158GO:0009845: seed germination3.04E-02
159GO:0000302: response to reactive oxygen species3.17E-02
160GO:0007264: small GTPase mediated signal transduction3.32E-02
161GO:0019761: glucosinolate biosynthetic process3.32E-02
162GO:0009753: response to jasmonic acid3.35E-02
163GO:0006633: fatty acid biosynthetic process3.53E-02
164GO:0010252: auxin homeostasis3.64E-02
165GO:0009639: response to red or far red light3.64E-02
166GO:0045490: pectin catabolic process3.87E-02
167GO:0009615: response to virus4.12E-02
168GO:0016311: dephosphorylation4.80E-02
169GO:0008219: cell death4.98E-02
170GO:0030244: cellulose biosynthetic process4.98E-02
RankGO TermAdjusted P value
1GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
4GO:0004674: protein serine/threonine kinase activity1.05E-06
5GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.02E-05
6GO:0016301: kinase activity1.45E-05
7GO:0004351: glutamate decarboxylase activity3.61E-05
8GO:0005524: ATP binding7.61E-05
9GO:0050660: flavin adenine dinucleotide binding1.79E-04
10GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.00E-04
11GO:0102391: decanoate--CoA ligase activity2.00E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity2.60E-04
13GO:0010285: L,L-diaminopimelate aminotransferase activity3.17E-04
14GO:0031127: alpha-(1,2)-fucosyltransferase activity3.17E-04
15GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.17E-04
16GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.17E-04
17GO:0031957: very long-chain fatty acid-CoA ligase activity3.17E-04
18GO:0009055: electron carrier activity5.56E-04
19GO:0004568: chitinase activity6.67E-04
20GO:0032454: histone demethylase activity (H3-K9 specific)6.92E-04
21GO:0004776: succinate-CoA ligase (GDP-forming) activity6.92E-04
22GO:0004103: choline kinase activity6.92E-04
23GO:0045543: gibberellin 2-beta-dioxygenase activity6.92E-04
24GO:0010297: heteropolysaccharide binding6.92E-04
25GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity6.92E-04
26GO:0004775: succinate-CoA ligase (ADP-forming) activity6.92E-04
27GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity6.92E-04
28GO:0050736: O-malonyltransferase activity6.92E-04
29GO:0042937: tripeptide transporter activity6.92E-04
30GO:0005262: calcium channel activity9.95E-04
31GO:0005388: calcium-transporting ATPase activity9.95E-04
32GO:0004751: ribose-5-phosphate isomerase activity1.12E-03
33GO:0004383: guanylate cyclase activity1.12E-03
34GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.12E-03
35GO:0001664: G-protein coupled receptor binding1.12E-03
36GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity1.12E-03
37GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.12E-03
38GO:0031683: G-protein beta/gamma-subunit complex binding1.12E-03
39GO:0030145: manganese ion binding1.16E-03
40GO:0004867: serine-type endopeptidase inhibitor activity1.25E-03
41GO:0005217: intracellular ligand-gated ion channel activity1.25E-03
42GO:0004970: ionotropic glutamate receptor activity1.25E-03
43GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.29E-03
44GO:0015189: L-lysine transmembrane transporter activity1.61E-03
45GO:0017089: glycolipid transporter activity1.61E-03
46GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.61E-03
47GO:0015181: arginine transmembrane transporter activity1.61E-03
48GO:0042299: lupeol synthase activity1.61E-03
49GO:0010279: indole-3-acetic acid amido synthetase activity2.16E-03
50GO:0015368: calcium:cation antiporter activity2.16E-03
51GO:0050373: UDP-arabinose 4-epimerase activity2.16E-03
52GO:0042936: dipeptide transporter activity2.16E-03
53GO:0051861: glycolipid binding2.16E-03
54GO:0015369: calcium:proton antiporter activity2.16E-03
55GO:0005313: L-glutamate transmembrane transporter activity2.16E-03
56GO:0046527: glucosyltransferase activity2.16E-03
57GO:0016866: intramolecular transferase activity2.16E-03
58GO:0016004: phospholipase activator activity2.16E-03
59GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.76E-03
60GO:0045735: nutrient reservoir activity3.23E-03
61GO:0005516: calmodulin binding3.39E-03
62GO:0004866: endopeptidase inhibitor activity3.40E-03
63GO:0047714: galactolipase activity3.40E-03
64GO:0004656: procollagen-proline 4-dioxygenase activity4.10E-03
65GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.10E-03
66GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.10E-03
67GO:0005261: cation channel activity4.10E-03
68GO:0003978: UDP-glucose 4-epimerase activity4.10E-03
69GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.84E-03
70GO:0005509: calcium ion binding5.19E-03
71GO:0051213: dioxygenase activity5.44E-03
72GO:0015491: cation:cation antiporter activity5.62E-03
73GO:0004564: beta-fructofuranosidase activity5.62E-03
74GO:0030170: pyridoxal phosphate binding6.22E-03
75GO:0030247: polysaccharide binding6.41E-03
76GO:0008970: phosphatidylcholine 1-acylhydrolase activity6.44E-03
77GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen6.57E-03
78GO:0008757: S-adenosylmethionine-dependent methyltransferase activity6.75E-03
79GO:0008417: fucosyltransferase activity7.30E-03
80GO:0015238: drug transmembrane transporter activity7.46E-03
81GO:0031490: chromatin DNA binding8.21E-03
82GO:0004575: sucrose alpha-glucosidase activity8.21E-03
83GO:0015174: basic amino acid transmembrane transporter activity8.21E-03
84GO:0008171: O-methyltransferase activity9.15E-03
85GO:0008559: xenobiotic-transporting ATPase activity1.01E-02
86GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.11E-02
87GO:0000976: transcription regulatory region sequence-specific DNA binding1.11E-02
88GO:0004364: glutathione transferase activity1.12E-02
89GO:0015114: phosphate ion transmembrane transporter activity1.22E-02
90GO:0015266: protein channel activity1.22E-02
91GO:0004022: alcohol dehydrogenase (NAD) activity1.22E-02
92GO:0046872: metal ion binding1.36E-02
93GO:0008061: chitin binding1.44E-02
94GO:0031418: L-ascorbic acid binding1.67E-02
95GO:0001046: core promoter sequence-specific DNA binding1.67E-02
96GO:0015171: amino acid transmembrane transporter activity1.74E-02
97GO:0045330: aspartyl esterase activity1.74E-02
98GO:0005506: iron ion binding1.81E-02
99GO:0080043: quercetin 3-O-glucosyltransferase activity2.05E-02
100GO:0016779: nucleotidyltransferase activity2.05E-02
101GO:0080044: quercetin 7-O-glucosyltransferase activity2.05E-02
102GO:0030599: pectinesterase activity2.11E-02
103GO:0015035: protein disulfide oxidoreductase activity2.31E-02
104GO:0004499: N,N-dimethylaniline monooxygenase activity2.31E-02
105GO:0004871: signal transducer activity2.50E-02
106GO:0005451: monovalent cation:proton antiporter activity2.59E-02
107GO:0005199: structural constituent of cell wall2.73E-02
108GO:0008080: N-acetyltransferase activity2.73E-02
109GO:0015299: solute:proton antiporter activity2.88E-02
110GO:0030246: carbohydrate binding2.96E-02
111GO:0019825: oxygen binding3.22E-02
112GO:0015385: sodium:proton antiporter activity3.48E-02
113GO:0046910: pectinesterase inhibitor activity3.61E-02
114GO:0015297: antiporter activity3.70E-02
115GO:0008483: transaminase activity3.80E-02
116GO:0005525: GTP binding3.96E-02
117GO:0020037: heme binding3.99E-02
118GO:0008194: UDP-glycosyltransferase activity4.33E-02
119GO:0004806: triglyceride lipase activity4.63E-02
120GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.98E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane3.66E-07
2GO:0005886: plasma membrane6.83E-05
3GO:0005576: extracellular region1.40E-04
4GO:0009530: primary cell wall1.12E-03
5GO:0005770: late endosome3.05E-03
6GO:0005798: Golgi-associated vesicle3.40E-03
7GO:0071944: cell periphery4.28E-03
8GO:0032580: Golgi cisterna membrane4.56E-03
9GO:0031305: integral component of mitochondrial inner membrane5.62E-03
10GO:0005618: cell wall6.13E-03
11GO:0000325: plant-type vacuole8.22E-03
12GO:0043231: intracellular membrane-bounded organelle9.32E-03
13GO:0005783: endoplasmic reticulum1.11E-02
14GO:0005744: mitochondrial inner membrane presequence translocase complex2.31E-02
15GO:0000785: chromatin3.32E-02
16GO:0009705: plant-type vacuole membrane3.87E-02
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Gene type



Gene DE type