co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G12950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
2	GO:0010028: xanthophyll cycle	1.77E-05
3	GO:0009686: gibberellin biosynthetic process	4.31E-05
4	GO:0016122: xanthophyll metabolic process	4.61E-05
5	GO:0018026: peptidyl-lysine monomethylation	4.61E-05
6	GO:0005977: glycogen metabolic process	8.18E-05
7	GO:0051639: actin filament network formation	1.23E-04
8	GO:0010239: chloroplast mRNA processing	1.23E-04
9	GO:0051764: actin crosslink formation	1.69E-04
10	GO:0015994: chlorophyll metabolic process	1.69E-04
11	GO:0042938: dipeptide transport	1.69E-04
12	GO:0010021: amylopectin biosynthetic process	1.69E-04
13	GO:0006655: phosphatidylglycerol biosynthetic process	2.72E-04
14	GO:1901259: chloroplast rRNA processing	3.27E-04
15	GO:0080186: developmental vegetative growth	3.84E-04
16	GO:0009638: phototropism	6.32E-04
17	GO:0046856: phosphatidylinositol dephosphorylation	7.68E-04
18	GO:0016024: CDP-diacylglycerol biosynthetic process	8.38E-04
19	GO:0015706: nitrate transport	8.38E-04
20	GO:0006094: gluconeogenesis	9.08E-04
21	GO:0009785: blue light signaling pathway	9.08E-04
22	GO:0010628: positive regulation of gene expression	9.08E-04
23	GO:0051017: actin filament bundle assembly	1.21E-03
24	GO:0000271: polysaccharide biosynthetic process	1.81E-03
25	GO:0010268: brassinosteroid homeostasis	1.90E-03
26	GO:0045489: pectin biosynthetic process	1.90E-03
27	GO:0005975: carbohydrate metabolic process	1.94E-03
28	GO:0019252: starch biosynthetic process	2.09E-03
29	GO:0008654: phospholipid biosynthetic process	2.09E-03
30	GO:0016132: brassinosteroid biosynthetic process	2.19E-03
31	GO:0006629: lipid metabolic process	2.34E-03
32	GO:0009567: double fertilization forming a zygote and endosperm	2.49E-03
33	GO:0016125: sterol metabolic process	2.49E-03
34	GO:0071805: potassium ion transmembrane transport	2.60E-03
35	GO:0016051: carbohydrate biosynthetic process	3.94E-03
36	GO:0006631: fatty acid metabolic process	4.43E-03
37	GO:0009640: photomorphogenesis	4.68E-03
38	GO:0006813: potassium ion transport	5.75E-03
39	GO:0006857: oligopeptide transport	6.03E-03
40	GO:0006096: glycolytic process	6.45E-03
41	GO:0009740: gibberellic acid mediated signaling pathway	7.04E-03
42	GO:0007623: circadian rhythm	1.08E-02
43	GO:0007166: cell surface receptor signaling pathway	1.18E-02
44	GO:0009658: chloroplast organization	1.46E-02
45	GO:0009723: response to ethylene	1.62E-02
46	GO:0016042: lipid catabolic process	2.20E-02
47	GO:0009408: response to heat	2.25E-02
48	GO:0009416: response to light stimulus	3.39E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0051777: ent-kaurenoate oxidase activity	1.77E-05
4	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.77E-05
5	GO:0016868: intramolecular transferase activity, phosphotransferases	4.61E-05
6	GO:0019156: isoamylase activity	4.61E-05
7	GO:0019201: nucleotide kinase activity	1.23E-04
8	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.23E-04
9	GO:0016279: protein-lysine N-methyltransferase activity	1.69E-04
10	GO:0042936: dipeptide transporter activity	1.69E-04
11	GO:0004605: phosphatidate cytidylyltransferase activity	2.72E-04
12	GO:0004332: fructose-bisphosphate aldolase activity	2.72E-04
13	GO:0042578: phosphoric ester hydrolase activity	2.72E-04
14	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.72E-04
15	GO:0004556: alpha-amylase activity	2.72E-04
16	GO:0004017: adenylate kinase activity	3.27E-04
17	GO:0047372: acylglycerol lipase activity	7.68E-04
18	GO:0004521: endoribonuclease activity	8.38E-04
19	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.38E-04
20	GO:0008081: phosphoric diester hydrolase activity	9.08E-04
21	GO:0015079: potassium ion transmembrane transporter activity	1.29E-03
22	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.46E-03
23	GO:0004871: signal transducer activity	1.99E-03
24	GO:0019901: protein kinase binding	2.09E-03
25	GO:0051015: actin filament binding	2.39E-03
26	GO:0016298: lipase activity	5.89E-03
27	GO:0003779: actin binding	7.19E-03
28	GO:0016758: transferase activity, transferring hexosyl groups	8.42E-03
29	GO:0043565: sequence-specific DNA binding	9.04E-03
30	GO:0016829: lyase activity	9.06E-03
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.02E-02
32	GO:0000287: magnesium ion binding	1.44E-02
33	GO:0016788: hydrolase activity, acting on ester bonds	1.48E-02
34	GO:0016787: hydrolase activity	1.79E-02
35	GO:0052689: carboxylic ester hydrolase activity	1.83E-02
36	GO:0042803: protein homodimerization activity	2.00E-02
37	GO:0004519: endonuclease activity	2.39E-02
38	GO:0019825: oxygen binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0032432: actin filament bundle	1.23E-04
3	GO:0009507: chloroplast	3.09E-04
4	GO:0005884: actin filament	7.68E-04
5	GO:0030095: chloroplast photosystem II	9.82E-04
6	GO:0009570: chloroplast stroma	2.61E-03
7	GO:0031977: thylakoid lumen	4.43E-03
8	GO:0009534: chloroplast thylakoid	4.96E-03
9	GO:0009543: chloroplast thylakoid lumen	8.58E-03
10	GO:0009536: plastid	1.02E-02
11	GO:0005789: endoplasmic reticulum membrane	1.27E-02
12	GO:0009535: chloroplast thylakoid membrane	1.87E-02