Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G12050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
2GO:0090627: plant epidermal cell differentiation0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0000476: maturation of 4.5S rRNA3.12E-05
5GO:0000967: rRNA 5'-end processing3.12E-05
6GO:0010480: microsporocyte differentiation3.12E-05
7GO:0034470: ncRNA processing7.88E-05
8GO:0009734: auxin-activated signaling pathway9.65E-05
9GO:0040008: regulation of growth1.36E-04
10GO:0045493: xylan catabolic process1.37E-04
11GO:0051513: regulation of monopolar cell growth2.04E-04
12GO:0007275: multicellular organism development2.20E-04
13GO:0009765: photosynthesis, light harvesting2.76E-04
14GO:0009228: thiamine biosynthetic process4.34E-04
15GO:0009913: epidermal cell differentiation4.34E-04
16GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.34E-04
17GO:0009942: longitudinal axis specification5.20E-04
18GO:0010114: response to red light5.38E-04
19GO:0009926: auxin polar transport5.38E-04
20GO:0009769: photosynthesis, light harvesting in photosystem II6.07E-04
21GO:0050829: defense response to Gram-negative bacterium6.07E-04
22GO:0009645: response to low light intensity stimulus6.07E-04
23GO:0048437: floral organ development6.07E-04
24GO:0009664: plant-type cell wall organization6.69E-04
25GO:0046620: regulation of organ growth6.99E-04
26GO:0009642: response to light intensity6.99E-04
27GO:0009657: plastid organization7.94E-04
28GO:0007389: pattern specification process7.94E-04
29GO:0010206: photosystem II repair8.92E-04
30GO:0009245: lipid A biosynthetic process8.92E-04
31GO:0043085: positive regulation of catalytic activity1.20E-03
32GO:1903507: negative regulation of nucleic acid-templated transcription1.20E-03
33GO:0048229: gametophyte development1.20E-03
34GO:0009698: phenylpropanoid metabolic process1.20E-03
35GO:0010075: regulation of meristem growth1.43E-03
36GO:0009934: regulation of meristem structural organization1.55E-03
37GO:0010030: positive regulation of seed germination1.67E-03
38GO:0006833: water transport1.79E-03
39GO:0006289: nucleotide-excision repair1.92E-03
40GO:0007017: microtubule-based process2.05E-03
41GO:0009768: photosynthesis, light harvesting in photosystem I2.05E-03
42GO:0016114: terpenoid biosynthetic process2.19E-03
43GO:0009269: response to desiccation2.19E-03
44GO:2000022: regulation of jasmonic acid mediated signaling pathway2.32E-03
45GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.46E-03
46GO:0009826: unidimensional cell growth2.49E-03
47GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.75E-03
48GO:0042335: cuticle development2.90E-03
49GO:0034220: ion transmembrane transport2.90E-03
50GO:0048653: anther development2.90E-03
51GO:0042631: cellular response to water deprivation2.90E-03
52GO:0006662: glycerol ether metabolic process3.05E-03
53GO:0009741: response to brassinosteroid3.05E-03
54GO:0009733: response to auxin3.28E-03
55GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.31E-03
56GO:0048825: cotyledon development3.36E-03
57GO:0010193: response to ozone3.51E-03
58GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.51E-03
59GO:0015979: photosynthesis3.65E-03
60GO:0010583: response to cyclopentenone3.68E-03
61GO:0009828: plant-type cell wall loosening4.00E-03
62GO:0010252: auxin homeostasis4.00E-03
63GO:0009627: systemic acquired resistance4.87E-03
64GO:0010411: xyloglucan metabolic process5.05E-03
65GO:0015995: chlorophyll biosynthetic process5.05E-03
66GO:0018298: protein-chromophore linkage5.42E-03
67GO:0010218: response to far red light5.79E-03
68GO:0009637: response to blue light6.38E-03
69GO:0034599: cellular response to oxidative stress6.58E-03
70GO:0009640: photomorphogenesis7.60E-03
71GO:0009735: response to cytokinin7.61E-03
72GO:0009644: response to high light intensity8.03E-03
73GO:0009416: response to light stimulus8.33E-03
74GO:0009611: response to wounding8.51E-03
75GO:0031347: regulation of defense response8.68E-03
76GO:0010224: response to UV-B9.59E-03
77GO:0006417: regulation of translation1.01E-02
78GO:0055085: transmembrane transport1.06E-02
79GO:0009740: gibberellic acid mediated signaling pathway1.15E-02
80GO:0042545: cell wall modification1.17E-02
81GO:0006396: RNA processing1.22E-02
82GO:0009742: brassinosteroid mediated signaling pathway1.25E-02
83GO:0009845: seed germination1.49E-02
84GO:0006633: fatty acid biosynthetic process1.65E-02
85GO:0045490: pectin catabolic process1.77E-02
86GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.91E-02
87GO:0009409: response to cold2.29E-02
88GO:0046777: protein autophosphorylation2.95E-02
89GO:0045454: cell redox homeostasis3.19E-02
90GO:0016042: lipid catabolic process3.63E-02
91GO:0006629: lipid metabolic process3.71E-02
92GO:0006468: protein phosphorylation3.75E-02
93GO:0006397: mRNA processing3.82E-02
94GO:0048364: root development3.82E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
4GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity3.12E-05
5GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity7.88E-05
6GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.88E-05
7GO:0070628: proteasome binding2.76E-04
8GO:0009044: xylan 1,4-beta-xylosidase activity2.76E-04
9GO:0046556: alpha-L-arabinofuranosidase activity2.76E-04
10GO:0031593: polyubiquitin binding4.34E-04
11GO:0031177: phosphopantetheine binding4.34E-04
12GO:0004712: protein serine/threonine/tyrosine kinase activity4.58E-04
13GO:0000035: acyl binding5.20E-04
14GO:0004602: glutathione peroxidase activity5.20E-04
15GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process6.99E-04
16GO:0009672: auxin:proton symporter activity9.92E-04
17GO:0008047: enzyme activator activity1.10E-03
18GO:0010329: auxin efflux transmembrane transporter activity1.43E-03
19GO:0031072: heat shock protein binding1.43E-03
20GO:0031409: pigment binding1.79E-03
21GO:0003714: transcription corepressor activity1.92E-03
22GO:0043130: ubiquitin binding1.92E-03
23GO:0033612: receptor serine/threonine kinase binding2.19E-03
24GO:0003756: protein disulfide isomerase activity2.61E-03
25GO:0003727: single-stranded RNA binding2.61E-03
26GO:0047134: protein-disulfide reductase activity2.75E-03
27GO:0004791: thioredoxin-disulfide reductase activity3.20E-03
28GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.84E-03
29GO:0003684: damaged DNA binding4.00E-03
30GO:0005200: structural constituent of cytoskeleton4.17E-03
31GO:0015250: water channel activity4.52E-03
32GO:0016168: chlorophyll binding4.69E-03
33GO:0005096: GTPase activator activity5.60E-03
34GO:0008289: lipid binding6.53E-03
35GO:0005515: protein binding7.31E-03
36GO:0004185: serine-type carboxypeptidase activity7.60E-03
37GO:0043621: protein self-association8.03E-03
38GO:0016298: lipase activity9.59E-03
39GO:0045330: aspartyl esterase activity1.01E-02
40GO:0030599: pectinesterase activity1.15E-02
41GO:0051082: unfolded protein binding1.20E-02
42GO:0015035: protein disulfide oxidoreductase activity1.22E-02
43GO:0046910: pectinesterase inhibitor activity1.68E-02
44GO:0004674: protein serine/threonine kinase activity2.14E-02
45GO:0016788: hydrolase activity, acting on ester bonds2.44E-02
46GO:0052689: carboxylic ester hydrolase activity3.02E-02
47GO:0016787: hydrolase activity3.63E-02
48GO:0003924: GTPase activity3.71E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid8.37E-07
3GO:0009570: chloroplast stroma9.83E-07
4GO:0009535: chloroplast thylakoid membrane3.07E-06
5GO:0009507: chloroplast3.08E-05
6GO:0009531: secondary cell wall2.04E-04
7GO:0009517: PSII associated light-harvesting complex II2.76E-04
8GO:0009538: photosystem I reaction center6.99E-04
9GO:0045298: tubulin complex8.92E-04
10GO:0009941: chloroplast envelope1.06E-03
11GO:0010287: plastoglobule1.18E-03
12GO:0009543: chloroplast thylakoid lumen1.24E-03
13GO:0009579: thylakoid1.46E-03
14GO:0030095: chloroplast photosystem II1.55E-03
15GO:0030076: light-harvesting complex1.67E-03
16GO:0009522: photosystem I3.20E-03
17GO:0009523: photosystem II3.36E-03
18GO:0005618: cell wall3.65E-03
19GO:0071944: cell periphery3.84E-03
20GO:0031977: thylakoid lumen7.19E-03
21GO:0005623: cell1.43E-02
22GO:0005886: plasma membrane1.45E-02
23GO:0009505: plant-type cell wall2.12E-02
24GO:0009506: plasmodesma2.25E-02
25GO:0016020: membrane2.64E-02
26GO:0005874: microtubule2.74E-02
27GO:0031969: chloroplast membrane2.81E-02
28GO:0005887: integral component of plasma membrane4.61E-02
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Gene type



Gene DE type