Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000731: DNA synthesis involved in DNA repair0.00E+00
2GO:0009880: embryonic pattern specification3.56E-06
3GO:0090421: embryonic meristem initiation1.48E-05
4GO:0015012: heparan sulfate proteoglycan biosynthetic process3.88E-05
5GO:0015914: phospholipid transport3.88E-05
6GO:0006024: glycosaminoglycan biosynthetic process3.88E-05
7GO:0030010: establishment of cell polarity3.88E-05
8GO:0006421: asparaginyl-tRNA aminoacylation6.95E-05
9GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening6.95E-05
10GO:0061158: 3'-UTR-mediated mRNA destabilization6.95E-05
11GO:0034613: cellular protein localization1.45E-04
12GO:0098719: sodium ion import across plasma membrane1.88E-04
13GO:0005513: detection of calcium ion1.88E-04
14GO:0009229: thiamine diphosphate biosynthetic process1.88E-04
15GO:1900425: negative regulation of defense response to bacterium2.34E-04
16GO:0009228: thiamine biosynthetic process2.34E-04
17GO:0009612: response to mechanical stimulus2.82E-04
18GO:0009819: drought recovery3.84E-04
19GO:0006261: DNA-dependent DNA replication4.37E-04
20GO:0090333: regulation of stomatal closure4.93E-04
21GO:0001708: cell fate specification4.93E-04
22GO:0042761: very long-chain fatty acid biosynthetic process5.49E-04
23GO:0051453: regulation of intracellular pH5.49E-04
24GO:0045037: protein import into chloroplast stroma7.29E-04
25GO:0042343: indole glucosinolate metabolic process9.19E-04
26GO:0098542: defense response to other organism1.19E-03
27GO:0061077: chaperone-mediated protein folding1.19E-03
28GO:0080092: regulation of pollen tube growth1.26E-03
29GO:0046777: protein autophosphorylation1.38E-03
30GO:0009561: megagametogenesis1.41E-03
31GO:0006814: sodium ion transport1.73E-03
32GO:0010183: pollen tube guidance1.81E-03
33GO:0000302: response to reactive oxygen species1.89E-03
34GO:0002229: defense response to oomycetes1.89E-03
35GO:0071805: potassium ion transmembrane transport2.24E-03
36GO:0051607: defense response to virus2.33E-03
37GO:0048527: lateral root development3.20E-03
38GO:0006260: DNA replication4.60E-03
39GO:0009736: cytokinin-activated signaling pathway4.95E-03
40GO:0006364: rRNA processing4.95E-03
41GO:0006486: protein glycosylation4.95E-03
42GO:0009620: response to fungus5.93E-03
43GO:0009553: embryo sac development6.18E-03
44GO:0018105: peptidyl-serine phosphorylation6.44E-03
45GO:0042742: defense response to bacterium6.66E-03
46GO:0009790: embryo development8.21E-03
47GO:0009451: RNA modification9.38E-03
48GO:0009826: unidimensional cell growth1.22E-02
49GO:0006970: response to osmotic stress1.32E-02
50GO:0009860: pollen tube growth1.32E-02
51GO:0007049: cell cycle1.36E-02
52GO:0010200: response to chitin1.50E-02
53GO:0044550: secondary metabolite biosynthetic process1.55E-02
54GO:0045454: cell redox homeostasis1.66E-02
55GO:0006397: mRNA processing1.99E-02
56GO:0048364: root development1.99E-02
57GO:0009651: response to salt stress2.25E-02
58GO:0009734: auxin-activated signaling pathway2.46E-02
59GO:0009735: response to cytokinin2.72E-02
60GO:0009738: abscisic acid-activated signaling pathway2.83E-02
61GO:0035556: intracellular signal transduction3.01E-02
62GO:0051301: cell division3.08E-02
63GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0004816: asparagine-tRNA ligase activity6.95E-05
3GO:0015386: potassium:proton antiporter activity6.67E-04
4GO:0008081: phosphoric diester hydrolase activity7.91E-04
5GO:0000175: 3'-5'-exoribonuclease activity7.91E-04
6GO:0004535: poly(A)-specific ribonuclease activity8.55E-04
7GO:0003887: DNA-directed DNA polymerase activity9.85E-04
8GO:0005528: FK506 binding1.05E-03
9GO:0008408: 3'-5' exonuclease activity1.19E-03
10GO:0004540: ribonuclease activity1.19E-03
11GO:0003727: single-stranded RNA binding1.41E-03
12GO:0047134: protein-disulfide reductase activity1.49E-03
13GO:0004791: thioredoxin-disulfide reductase activity1.73E-03
14GO:0015385: sodium:proton antiporter activity2.07E-03
15GO:0009931: calcium-dependent protein serine/threonine kinase activity2.61E-03
16GO:0004683: calmodulin-dependent protein kinase activity2.70E-03
17GO:0000166: nucleotide binding3.31E-03
18GO:0035091: phosphatidylinositol binding4.26E-03
19GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.49E-03
20GO:0019825: oxygen binding4.69E-03
21GO:0005509: calcium ion binding6.14E-03
22GO:0005506: iron ion binding6.56E-03
23GO:0008026: ATP-dependent helicase activity6.57E-03
24GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen7.51E-03
25GO:0008565: protein transporter activity8.35E-03
26GO:0005524: ATP binding9.57E-03
27GO:0020037: heme binding1.05E-02
28GO:0003723: RNA binding1.17E-02
29GO:0004497: monooxygenase activity1.46E-02
30GO:0005515: protein binding1.68E-02
31GO:0042803: protein homodimerization activity1.72E-02
32GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.75E-02
33GO:0016887: ATPase activity2.63E-02
34GO:0016301: kinase activity3.06E-02
35GO:0004674: protein serine/threonine kinase activity3.30E-02
36GO:0016740: transferase activity3.34E-02
37GO:0030246: carbohydrate binding3.58E-02
38GO:0005516: calmodulin binding3.88E-02
RankGO TermAdjusted P value
1GO:0030014: CCR4-NOT complex1.48E-05
2GO:0043625: delta DNA polymerase complex1.48E-05
3GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.15E-03
4GO:0032580: Golgi cisterna membrane2.15E-03
5GO:0016021: integral component of membrane3.41E-03
6GO:0031902: late endosome membrane3.82E-03
7GO:0010008: endosome membrane5.68E-03
8GO:0009706: chloroplast inner membrane6.31E-03
9GO:0005623: cell7.51E-03
10GO:0005783: endoplasmic reticulum1.01E-02
11GO:0005789: endoplasmic reticulum membrane1.02E-02
12GO:0005737: cytoplasm1.09E-02
13GO:0005886: plasma membrane1.53E-02
14GO:0005829: cytosol1.61E-02
15GO:0005622: intracellular4.37E-02
16GO:0005768: endosome4.45E-02
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Gene type



Gene DE type