Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11670

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080056: petal vascular tissue pattern formation0.00E+00
2GO:0009312: oligosaccharide biosynthetic process0.00E+00
3GO:0032497: detection of lipopolysaccharide0.00E+00
4GO:0006983: ER overload response0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0010793: regulation of mRNA export from nucleus0.00E+00
7GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
8GO:0080057: sepal vascular tissue pattern formation0.00E+00
9GO:0048867: stem cell fate determination0.00E+00
10GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
11GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
12GO:0000188: inactivation of MAPK activity0.00E+00
13GO:0010398: xylogalacturonan metabolic process0.00E+00
14GO:0007160: cell-matrix adhesion0.00E+00
15GO:0000266: mitochondrial fission5.40E-05
16GO:0008219: cell death1.19E-04
17GO:0006014: D-ribose metabolic process1.54E-04
18GO:0006468: protein phosphorylation2.27E-04
19GO:0010941: regulation of cell death3.27E-04
20GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic3.27E-04
21GO:1902265: abscisic acid homeostasis3.27E-04
22GO:0035494: SNARE complex disassembly3.27E-04
23GO:0035344: hypoxanthine transport3.27E-04
24GO:0031338: regulation of vesicle fusion3.27E-04
25GO:0098721: uracil import across plasma membrane3.27E-04
26GO:0098702: adenine import across plasma membrane3.27E-04
27GO:0035266: meristem growth3.27E-04
28GO:0098710: guanine import across plasma membrane3.27E-04
29GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway3.27E-04
30GO:0048482: plant ovule morphogenesis3.27E-04
31GO:0007292: female gamete generation3.27E-04
32GO:0009819: drought recovery3.44E-04
33GO:0006875: cellular metal ion homeostasis3.44E-04
34GO:0016559: peroxisome fission3.44E-04
35GO:0046323: glucose import3.47E-04
36GO:0048544: recognition of pollen3.82E-04
37GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.99E-04
38GO:0048367: shoot system development6.11E-04
39GO:0009626: plant-type hypersensitive response6.42E-04
40GO:0043069: negative regulation of programmed cell death6.98E-04
41GO:0050994: regulation of lipid catabolic process7.13E-04
42GO:0043066: negative regulation of apoptotic process7.13E-04
43GO:0019483: beta-alanine biosynthetic process7.13E-04
44GO:0006212: uracil catabolic process7.13E-04
45GO:0007584: response to nutrient7.13E-04
46GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.13E-04
47GO:0051788: response to misfolded protein7.13E-04
48GO:0019441: tryptophan catabolic process to kynurenine7.13E-04
49GO:0052542: defense response by callose deposition7.13E-04
50GO:0051258: protein polymerization7.13E-04
51GO:0009727: detection of ethylene stimulus7.13E-04
52GO:0050684: regulation of mRNA processing7.13E-04
53GO:0060968: regulation of gene silencing1.16E-03
54GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.16E-03
55GO:0032784: regulation of DNA-templated transcription, elongation1.16E-03
56GO:0061158: 3'-UTR-mediated mRNA destabilization1.16E-03
57GO:0042780: tRNA 3'-end processing1.16E-03
58GO:0090630: activation of GTPase activity1.16E-03
59GO:0046621: negative regulation of organ growth1.16E-03
60GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.16E-03
61GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.16E-03
62GO:0046777: protein autophosphorylation1.23E-03
63GO:0045087: innate immune response1.37E-03
64GO:0072334: UDP-galactose transmembrane transport1.66E-03
65GO:0015749: monosaccharide transport1.66E-03
66GO:0010104: regulation of ethylene-activated signaling pathway1.66E-03
67GO:0009399: nitrogen fixation1.66E-03
68GO:0002679: respiratory burst involved in defense response1.66E-03
69GO:0010116: positive regulation of abscisic acid biosynthetic process1.66E-03
70GO:0048194: Golgi vesicle budding1.66E-03
71GO:2001289: lipid X metabolic process1.66E-03
72GO:0070301: cellular response to hydrogen peroxide1.66E-03
73GO:0010150: leaf senescence1.76E-03
74GO:1902584: positive regulation of response to water deprivation2.23E-03
75GO:0006542: glutamine biosynthetic process2.23E-03
76GO:0009687: abscisic acid metabolic process2.23E-03
77GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly2.23E-03
78GO:0033320: UDP-D-xylose biosynthetic process2.23E-03
79GO:0010107: potassium ion import2.23E-03
80GO:0071215: cellular response to abscisic acid stimulus2.33E-03
81GO:0048015: phosphatidylinositol-mediated signaling2.84E-03
82GO:0005513: detection of calcium ion2.84E-03
83GO:0097428: protein maturation by iron-sulfur cluster transfer2.84E-03
84GO:0007029: endoplasmic reticulum organization2.84E-03
85GO:0010225: response to UV-C2.84E-03
86GO:0043248: proteasome assembly3.51E-03
87GO:0042732: D-xylose metabolic process3.51E-03
88GO:0048317: seed morphogenesis3.51E-03
89GO:1900425: negative regulation of defense response to bacterium3.51E-03
90GO:0010337: regulation of salicylic acid metabolic process3.51E-03
91GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.51E-03
92GO:0006751: glutathione catabolic process3.51E-03
93GO:0048827: phyllome development3.51E-03
94GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.51E-03
95GO:0048232: male gamete generation3.51E-03
96GO:0019252: starch biosynthetic process3.68E-03
97GO:0006635: fatty acid beta-oxidation3.94E-03
98GO:0043966: histone H3 acetylation4.23E-03
99GO:0009612: response to mechanical stimulus4.23E-03
100GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.23E-03
101GO:0009742: brassinosteroid mediated signaling pathway4.67E-03
102GO:1902074: response to salt4.99E-03
103GO:0006955: immune response4.99E-03
104GO:0006904: vesicle docking involved in exocytosis5.07E-03
105GO:0051607: defense response to virus5.38E-03
106GO:0001666: response to hypoxia5.70E-03
107GO:0010078: maintenance of root meristem identity5.80E-03
108GO:0032875: regulation of DNA endoreduplication5.80E-03
109GO:1900150: regulation of defense response to fungus5.80E-03
110GO:0006886: intracellular protein transport6.58E-03
111GO:0030968: endoplasmic reticulum unfolded protein response6.65E-03
112GO:0043562: cellular response to nitrogen levels6.65E-03
113GO:0009808: lignin metabolic process6.65E-03
114GO:0006303: double-strand break repair via nonhomologous end joining6.65E-03
115GO:2000031: regulation of salicylic acid mediated signaling pathway6.65E-03
116GO:0010112: regulation of systemic acquired resistance7.54E-03
117GO:0009821: alkaloid biosynthetic process7.54E-03
118GO:0051865: protein autoubiquitination7.54E-03
119GO:0010311: lateral root formation7.82E-03
120GO:0006499: N-terminal protein myristoylation8.21E-03
121GO:0000723: telomere maintenance8.48E-03
122GO:0009086: methionine biosynthetic process8.48E-03
123GO:0008202: steroid metabolic process8.48E-03
124GO:0048364: root development9.20E-03
125GO:0007064: mitotic sister chromatid cohesion9.45E-03
126GO:0006995: cellular response to nitrogen starvation9.45E-03
127GO:0048829: root cap development9.45E-03
128GO:0010629: negative regulation of gene expression9.45E-03
129GO:0006099: tricarboxylic acid cycle9.88E-03
130GO:0006470: protein dephosphorylation1.03E-02
131GO:0007166: cell surface receptor signaling pathway1.03E-02
132GO:0072593: reactive oxygen species metabolic process1.05E-02
133GO:0009682: induced systemic resistance1.05E-02
134GO:0006352: DNA-templated transcription, initiation1.05E-02
135GO:0030148: sphingolipid biosynthetic process1.05E-02
136GO:0010015: root morphogenesis1.05E-02
137GO:0000038: very long-chain fatty acid metabolic process1.05E-02
138GO:0006887: exocytosis1.12E-02
139GO:0006897: endocytosis1.12E-02
140GO:0010152: pollen maturation1.15E-02
141GO:0071365: cellular response to auxin stimulus1.15E-02
142GO:0010588: cotyledon vascular tissue pattern formation1.26E-02
143GO:0006807: nitrogen compound metabolic process1.26E-02
144GO:0055046: microgametogenesis1.26E-02
145GO:0007034: vacuolar transport1.37E-02
146GO:0009933: meristem structural organization1.37E-02
147GO:0016310: phosphorylation1.46E-02
148GO:0031347: regulation of defense response1.48E-02
149GO:0080188: RNA-directed DNA methylation1.49E-02
150GO:0090351: seedling development1.49E-02
151GO:0010030: positive regulation of seed germination1.49E-02
152GO:0046854: phosphatidylinositol phosphorylation1.49E-02
153GO:0009969: xyloglucan biosynthetic process1.49E-02
154GO:0009225: nucleotide-sugar metabolic process1.49E-02
155GO:0000162: tryptophan biosynthetic process1.61E-02
156GO:0034976: response to endoplasmic reticulum stress1.61E-02
157GO:0006874: cellular calcium ion homeostasis1.86E-02
158GO:0010073: meristem maintenance1.86E-02
159GO:0006825: copper ion transport1.86E-02
160GO:0006096: glycolytic process1.95E-02
161GO:0031408: oxylipin biosynthetic process1.99E-02
162GO:0010200: response to chitin2.08E-02
163GO:2000022: regulation of jasmonic acid mediated signaling pathway2.12E-02
164GO:0030433: ubiquitin-dependent ERAD pathway2.12E-02
165GO:0035428: hexose transmembrane transport2.12E-02
166GO:0007005: mitochondrion organization2.12E-02
167GO:0031348: negative regulation of defense response2.12E-02
168GO:0071456: cellular response to hypoxia2.12E-02
169GO:0016192: vesicle-mediated transport2.13E-02
170GO:0071369: cellular response to ethylene stimulus2.25E-02
171GO:0009625: response to insect2.25E-02
172GO:0006012: galactose metabolic process2.25E-02
173GO:0045454: cell redox homeostasis2.50E-02
174GO:0042631: cellular response to water deprivation2.68E-02
175GO:0010118: stomatal movement2.68E-02
176GO:0009651: response to salt stress2.80E-02
177GO:0006885: regulation of pH2.82E-02
178GO:0045489: pectin biosynthetic process2.82E-02
179GO:0010305: leaf vascular tissue pattern formation2.82E-02
180GO:0061025: membrane fusion2.97E-02
181GO:0009408: response to heat3.25E-02
182GO:0000302: response to reactive oxygen species3.28E-02
183GO:0071554: cell wall organization or biogenesis3.28E-02
184GO:0002229: defense response to oomycetes3.28E-02
185GO:0010583: response to cyclopentenone3.44E-02
186GO:0007264: small GTPase mediated signal transduction3.44E-02
187GO:0006914: autophagy3.76E-02
188GO:0006310: DNA recombination3.76E-02
189GO:0046686: response to cadmium ion4.21E-02
190GO:0009615: response to virus4.26E-02
191GO:0010029: regulation of seed germination4.43E-02
192GO:0009816: defense response to bacterium, incompatible interaction4.43E-02
193GO:0009873: ethylene-activated signaling pathway4.45E-02
194GO:0009627: systemic acquired resistance4.61E-02
195GO:0042128: nitrate assimilation4.61E-02
196GO:0048573: photoperiodism, flowering4.78E-02
197GO:0009617: response to bacterium4.82E-02
198GO:0016049: cell growth4.96E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0003837: beta-ureidopropionase activity0.00E+00
3GO:0070577: lysine-acetylated histone binding0.00E+00
4GO:0015591: D-ribose transmembrane transporter activity0.00E+00
5GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
6GO:0015148: D-xylose transmembrane transporter activity0.00E+00
7GO:0015575: mannitol transmembrane transporter activity0.00E+00
8GO:0016504: peptidase activator activity0.00E+00
9GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
10GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
11GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
12GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
13GO:0015576: sorbitol transmembrane transporter activity0.00E+00
14GO:0015370: solute:sodium symporter activity0.00E+00
15GO:0005548: phospholipid transporter activity0.00E+00
16GO:0005524: ATP binding3.12E-07
17GO:0016301: kinase activity4.08E-07
18GO:0004674: protein serine/threonine kinase activity6.76E-06
19GO:0019829: cation-transporting ATPase activity1.71E-05
20GO:0015145: monosaccharide transmembrane transporter activity1.07E-04
21GO:0004747: ribokinase activity2.10E-04
22GO:0015144: carbohydrate transmembrane transporter activity2.61E-04
23GO:0001102: RNA polymerase II activating transcription factor binding3.27E-04
24GO:0016303: 1-phosphatidylinositol-3-kinase activity3.27E-04
25GO:0015208: guanine transmembrane transporter activity3.27E-04
26GO:0047150: betaine-homocysteine S-methyltransferase activity3.27E-04
27GO:0015207: adenine transmembrane transporter activity3.27E-04
28GO:0015294: solute:cation symporter activity3.27E-04
29GO:0015168: glycerol transmembrane transporter activity3.27E-04
30GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.27E-04
31GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.27E-04
32GO:0005351: sugar:proton symporter activity3.27E-04
33GO:0009679: hexose:proton symporter activity3.27E-04
34GO:0008865: fructokinase activity3.44E-04
35GO:0030955: potassium ion binding5.99E-04
36GO:0004743: pyruvate kinase activity5.99E-04
37GO:0045140: inositol phosphoceramide synthase activity7.13E-04
38GO:0004061: arylformamidase activity7.13E-04
39GO:0047209: coniferyl-alcohol glucosyltransferase activity7.13E-04
40GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters7.13E-04
41GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.04E-03
42GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.16E-03
43GO:0042781: 3'-tRNA processing endoribonuclease activity1.16E-03
44GO:0004383: guanylate cyclase activity1.16E-03
45GO:0016595: glutamate binding1.16E-03
46GO:0005483: soluble NSF attachment protein activity1.16E-03
47GO:0017025: TBP-class protein binding1.31E-03
48GO:0043130: ubiquitin binding1.61E-03
49GO:0005354: galactose transmembrane transporter activity1.66E-03
50GO:0001653: peptide receptor activity1.66E-03
51GO:0004108: citrate (Si)-synthase activity1.66E-03
52GO:0004300: enoyl-CoA hydratase activity1.66E-03
53GO:0070628: proteasome binding2.23E-03
54GO:0015210: uracil transmembrane transporter activity2.23E-03
55GO:0015204: urea transmembrane transporter activity2.23E-03
56GO:0004834: tryptophan synthase activity2.23E-03
57GO:0004737: pyruvate decarboxylase activity2.23E-03
58GO:0019905: syntaxin binding2.23E-03
59GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.23E-03
60GO:0005459: UDP-galactose transmembrane transporter activity2.84E-03
61GO:0017137: Rab GTPase binding2.84E-03
62GO:0004356: glutamate-ammonia ligase activity2.84E-03
63GO:0010294: abscisic acid glucosyltransferase activity2.84E-03
64GO:0030246: carbohydrate binding2.98E-03
65GO:0000287: magnesium ion binding3.34E-03
66GO:0005355: glucose transmembrane transporter activity3.43E-03
67GO:0016853: isomerase activity3.43E-03
68GO:0035252: UDP-xylosyltransferase activity3.51E-03
69GO:0036402: proteasome-activating ATPase activity3.51E-03
70GO:0030976: thiamine pyrophosphate binding3.51E-03
71GO:0048040: UDP-glucuronate decarboxylase activity3.51E-03
72GO:0004012: phospholipid-translocating ATPase activity4.23E-03
73GO:0070403: NAD+ binding4.23E-03
74GO:0004672: protein kinase activity4.89E-03
75GO:0042162: telomeric DNA binding4.99E-03
76GO:0008143: poly(A) binding4.99E-03
77GO:0004620: phospholipase activity4.99E-03
78GO:0016831: carboxy-lyase activity4.99E-03
79GO:0052747: sinapyl alcohol dehydrogenase activity5.80E-03
80GO:0004034: aldose 1-epimerase activity5.80E-03
81GO:0004714: transmembrane receptor protein tyrosine kinase activity5.80E-03
82GO:0005267: potassium channel activity6.65E-03
83GO:0005375: copper ion transmembrane transporter activity6.65E-03
84GO:0008142: oxysterol binding6.65E-03
85GO:0004003: ATP-dependent DNA helicase activity7.54E-03
86GO:0071949: FAD binding7.54E-03
87GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.54E-03
88GO:0008417: fucosyltransferase activity7.54E-03
89GO:0005096: GTPase activator activity7.82E-03
90GO:0016844: strictosidine synthase activity8.48E-03
91GO:0004713: protein tyrosine kinase activity9.45E-03
92GO:0004177: aminopeptidase activity1.05E-02
93GO:0047372: acylglycerol lipase activity1.05E-02
94GO:0045551: cinnamyl-alcohol dehydrogenase activity1.15E-02
95GO:0004521: endoribonuclease activity1.15E-02
96GO:0005388: calcium-transporting ATPase activity1.26E-02
97GO:0000175: 3'-5'-exoribonuclease activity1.26E-02
98GO:0004022: alcohol dehydrogenase (NAD) activity1.26E-02
99GO:0004535: poly(A)-specific ribonuclease activity1.37E-02
100GO:0003729: mRNA binding1.44E-02
101GO:0046982: protein heterodimerization activity1.48E-02
102GO:0004725: protein tyrosine phosphatase activity1.61E-02
103GO:0016887: ATPase activity1.67E-02
104GO:0051536: iron-sulfur cluster binding1.73E-02
105GO:0043424: protein histidine kinase binding1.86E-02
106GO:0008233: peptidase activity1.95E-02
107GO:0033612: receptor serine/threonine kinase binding1.99E-02
108GO:0004540: ribonuclease activity1.99E-02
109GO:0008408: 3'-5' exonuclease activity1.99E-02
110GO:0080044: quercetin 7-O-glucosyltransferase activity2.15E-02
111GO:0080043: quercetin 3-O-glucosyltransferase activity2.15E-02
112GO:0003824: catalytic activity2.36E-02
113GO:0003727: single-stranded RNA binding2.39E-02
114GO:0003756: protein disulfide isomerase activity2.39E-02
115GO:0005451: monovalent cation:proton antiporter activity2.68E-02
116GO:0004402: histone acetyltransferase activity2.68E-02
117GO:0004722: protein serine/threonine phosphatase activity2.81E-02
118GO:0001085: RNA polymerase II transcription factor binding2.82E-02
119GO:0005515: protein binding2.90E-02
120GO:0015299: solute:proton antiporter activity2.97E-02
121GO:0010181: FMN binding2.97E-02
122GO:0015385: sodium:proton antiporter activity3.60E-02
123GO:0003684: damaged DNA binding3.76E-02
124GO:0016791: phosphatase activity3.76E-02
125GO:0016413: O-acetyltransferase activity4.09E-02
126GO:0051213: dioxygenase activity4.26E-02
127GO:0008194: UDP-glycosyltransferase activity4.53E-02
128GO:0008375: acetylglucosaminyltransferase activity4.61E-02
129GO:0009931: calcium-dependent protein serine/threonine kinase activity4.61E-02
130GO:0004721: phosphoprotein phosphatase activity4.78E-02
131GO:0030247: polysaccharide binding4.78E-02
132GO:0004683: calmodulin-dependent protein kinase activity4.78E-02
133GO:0008236: serine-type peptidase activity4.96E-02
RankGO TermAdjusted P value
1GO:0008305: integrin complex0.00E+00
2GO:0005942: phosphatidylinositol 3-kinase complex0.00E+00
3GO:0005886: plasma membrane1.56E-08
4GO:0016021: integral component of membrane3.51E-07
5GO:0016020: membrane2.60E-04
6GO:0045252: oxoglutarate dehydrogenase complex3.27E-04
7GO:0043564: Ku70:Ku80 complex3.27E-04
8GO:0030014: CCR4-NOT complex3.27E-04
9GO:0005783: endoplasmic reticulum4.04E-04
10GO:0005829: cytosol4.52E-04
11GO:0005794: Golgi apparatus5.20E-04
12GO:0005778: peroxisomal membrane6.32E-04
13GO:0000124: SAGA complex7.13E-04
14GO:0042406: extrinsic component of endoplasmic reticulum membrane1.16E-03
15GO:0070062: extracellular exosome1.66E-03
16GO:0005789: endoplasmic reticulum membrane1.80E-03
17GO:0005774: vacuolar membrane1.89E-03
18GO:0005741: mitochondrial outer membrane1.95E-03
19GO:0000164: protein phosphatase type 1 complex2.84E-03
20GO:0000145: exocyst4.21E-03
21GO:0031597: cytosolic proteasome complex4.23E-03
22GO:0000815: ESCRT III complex4.23E-03
23GO:0030173: integral component of Golgi membrane4.23E-03
24GO:0031595: nuclear proteasome complex4.99E-03
25GO:0005768: endosome5.42E-03
26GO:0005669: transcription factor TFIID complex5.80E-03
27GO:0030131: clathrin adaptor complex5.80E-03
28GO:0005773: vacuole6.07E-03
29GO:0000784: nuclear chromosome, telomeric region6.65E-03
30GO:0010494: cytoplasmic stress granule7.54E-03
31GO:0008540: proteasome regulatory particle, base subcomplex8.48E-03
32GO:0030125: clathrin vesicle coat9.45E-03
33GO:0048471: perinuclear region of cytoplasm1.05E-02
34GO:0005802: trans-Golgi network1.35E-02
35GO:0030176: integral component of endoplasmic reticulum membrane1.49E-02
36GO:0005795: Golgi stack1.49E-02
37GO:0043234: protein complex1.61E-02
38GO:0045271: respiratory chain complex I1.86E-02
39GO:0005905: clathrin-coated pit1.99E-02
40GO:0005839: proteasome core complex1.99E-02
41GO:0005777: peroxisome2.51E-02
42GO:0032580: Golgi cisterna membrane3.76E-02
43GO:0005788: endoplasmic reticulum lumen4.43E-02
44GO:0005667: transcription factor complex4.61E-02
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Gene type



Gene DE type