GO Enrichment Analysis of Co-expressed Genes with
AT5G11630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 2 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.31E-07 |
| 3 | GO:0010197: polar nucleus fusion | 5.62E-06 |
| 4 | GO:0010162: seed dormancy process | 4.04E-05 |
| 5 | GO:0000077: DNA damage checkpoint | 4.60E-05 |
| 6 | GO:0046686: response to cadmium ion | 5.32E-05 |
| 7 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.10E-04 |
| 8 | GO:0051258: protein polymerization | 1.13E-04 |
| 9 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 1.13E-04 |
| 10 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.13E-04 |
| 11 | GO:0045041: protein import into mitochondrial intermembrane space | 1.13E-04 |
| 12 | GO:0080181: lateral root branching | 1.13E-04 |
| 13 | GO:0040020: regulation of meiotic nuclear division | 1.13E-04 |
| 14 | GO:0009294: DNA mediated transformation | 1.65E-04 |
| 15 | GO:0006954: inflammatory response | 1.95E-04 |
| 16 | GO:0015695: organic cation transport | 1.95E-04 |
| 17 | GO:0009855: determination of bilateral symmetry | 2.85E-04 |
| 18 | GO:0015696: ammonium transport | 2.85E-04 |
| 19 | GO:0006168: adenine salvage | 2.85E-04 |
| 20 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 2.85E-04 |
| 21 | GO:0001676: long-chain fatty acid metabolic process | 2.85E-04 |
| 22 | GO:0006166: purine ribonucleoside salvage | 2.85E-04 |
| 23 | GO:0007276: gamete generation | 2.85E-04 |
| 24 | GO:0000460: maturation of 5.8S rRNA | 3.84E-04 |
| 25 | GO:0044205: 'de novo' UMP biosynthetic process | 3.84E-04 |
| 26 | GO:0010188: response to microbial phytotoxin | 3.84E-04 |
| 27 | GO:0072488: ammonium transmembrane transport | 3.84E-04 |
| 28 | GO:0042273: ribosomal large subunit biogenesis | 3.84E-04 |
| 29 | GO:0044209: AMP salvage | 4.88E-04 |
| 30 | GO:0000741: karyogamy | 5.98E-04 |
| 31 | GO:0045040: protein import into mitochondrial outer membrane | 5.98E-04 |
| 32 | GO:0000470: maturation of LSU-rRNA | 5.98E-04 |
| 33 | GO:0042026: protein refolding | 7.13E-04 |
| 34 | GO:0006458: 'de novo' protein folding | 7.13E-04 |
| 35 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 8.33E-04 |
| 36 | GO:0080186: developmental vegetative growth | 8.33E-04 |
| 37 | GO:0009690: cytokinin metabolic process | 9.57E-04 |
| 38 | GO:0006364: rRNA processing | 1.14E-03 |
| 39 | GO:0010332: response to gamma radiation | 1.22E-03 |
| 40 | GO:0006189: 'de novo' IMP biosynthetic process | 1.22E-03 |
| 41 | GO:0007338: single fertilization | 1.22E-03 |
| 42 | GO:0009553: embryo sac development | 1.56E-03 |
| 43 | GO:0016925: protein sumoylation | 1.81E-03 |
| 44 | GO:0071365: cellular response to auxin stimulus | 1.81E-03 |
| 45 | GO:0006626: protein targeting to mitochondrion | 1.98E-03 |
| 46 | GO:0034976: response to endoplasmic reticulum stress | 2.49E-03 |
| 47 | GO:0006406: mRNA export from nucleus | 2.67E-03 |
| 48 | GO:0009116: nucleoside metabolic process | 2.67E-03 |
| 49 | GO:0000027: ribosomal large subunit assembly | 2.67E-03 |
| 50 | GO:0051302: regulation of cell division | 2.85E-03 |
| 51 | GO:0006457: protein folding | 3.02E-03 |
| 52 | GO:0006334: nucleosome assembly | 3.04E-03 |
| 53 | GO:0061077: chaperone-mediated protein folding | 3.04E-03 |
| 54 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.23E-03 |
| 55 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.83E-03 |
| 56 | GO:0006606: protein import into nucleus | 4.04E-03 |
| 57 | GO:0006520: cellular amino acid metabolic process | 4.25E-03 |
| 58 | GO:0006662: glycerol ether metabolic process | 4.25E-03 |
| 59 | GO:0009960: endosperm development | 4.25E-03 |
| 60 | GO:0010193: response to ozone | 4.91E-03 |
| 61 | GO:0009567: double fertilization forming a zygote and endosperm | 5.60E-03 |
| 62 | GO:0045454: cell redox homeostasis | 6.23E-03 |
| 63 | GO:0009408: response to heat | 7.68E-03 |
| 64 | GO:0010311: lateral root formation | 7.87E-03 |
| 65 | GO:0009407: toxin catabolic process | 8.14E-03 |
| 66 | GO:0045087: innate immune response | 8.96E-03 |
| 67 | GO:0034599: cellular response to oxidative stress | 9.25E-03 |
| 68 | GO:0006631: fatty acid metabolic process | 1.01E-02 |
| 69 | GO:0009636: response to toxic substance | 1.16E-02 |
| 70 | GO:0000154: rRNA modification | 1.16E-02 |
| 71 | GO:0009555: pollen development | 1.37E-02 |
| 72 | GO:0016569: covalent chromatin modification | 1.63E-02 |
| 73 | GO:0018105: peptidyl-serine phosphorylation | 1.73E-02 |
| 74 | GO:0016036: cellular response to phosphate starvation | 2.38E-02 |
| 75 | GO:0006413: translational initiation | 2.38E-02 |
| 76 | GO:0007623: circadian rhythm | 2.50E-02 |
| 77 | GO:0009617: response to bacterium | 2.84E-02 |
| 78 | GO:0042254: ribosome biogenesis | 3.46E-02 |
| 79 | GO:0080167: response to karrikin | 3.98E-02 |
| 80 | GO:0010200: response to chitin | 4.08E-02 |
| 81 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 82 | GO:0045892: negative regulation of transcription, DNA-templated | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 2 | GO:0043021: ribonucleoprotein complex binding | 1.31E-07 |
| 3 | GO:0000166: nucleotide binding | 3.46E-05 |
| 4 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 4.60E-05 |
| 5 | GO:0004407: histone deacetylase activity | 1.10E-04 |
| 6 | GO:0016743: carboxyl- or carbamoyltransferase activity | 1.13E-04 |
| 7 | GO:0004557: alpha-galactosidase activity | 1.95E-04 |
| 8 | GO:0052692: raffinose alpha-galactosidase activity | 1.95E-04 |
| 9 | GO:0003999: adenine phosphoribosyltransferase activity | 2.85E-04 |
| 10 | GO:0031386: protein tag | 4.88E-04 |
| 11 | GO:0008519: ammonium transmembrane transporter activity | 5.98E-04 |
| 12 | GO:0003746: translation elongation factor activity | 6.76E-04 |
| 13 | GO:0102391: decanoate--CoA ligase activity | 7.13E-04 |
| 14 | GO:0030515: snoRNA binding | 8.33E-04 |
| 15 | GO:0043295: glutathione binding | 8.33E-04 |
| 16 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.33E-04 |
| 17 | GO:0017056: structural constituent of nuclear pore | 9.57E-04 |
| 18 | GO:0005487: nucleocytoplasmic transporter activity | 1.36E-03 |
| 19 | GO:0051082: unfolded protein binding | 1.60E-03 |
| 20 | GO:0044183: protein binding involved in protein folding | 1.66E-03 |
| 21 | GO:0031072: heat shock protein binding | 1.98E-03 |
| 22 | GO:0005528: FK506 binding | 2.67E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 3.63E-03 |
| 24 | GO:0047134: protein-disulfide reductase activity | 3.83E-03 |
| 25 | GO:0004791: thioredoxin-disulfide reductase activity | 4.47E-03 |
| 26 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.37E-03 |
| 27 | GO:0016597: amino acid binding | 6.08E-03 |
| 28 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 6.82E-03 |
| 29 | GO:0004683: calmodulin-dependent protein kinase activity | 7.08E-03 |
| 30 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.60E-03 |
| 31 | GO:0050897: cobalt ion binding | 8.41E-03 |
| 32 | GO:0042393: histone binding | 9.82E-03 |
| 33 | GO:0004364: glutathione transferase activity | 1.04E-02 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.19E-02 |
| 35 | GO:0005524: ATP binding | 1.32E-02 |
| 36 | GO:0015035: protein disulfide oxidoreductase activity | 1.73E-02 |
| 37 | GO:0016746: transferase activity, transferring acyl groups | 1.73E-02 |
| 38 | GO:0005507: copper ion binding | 1.95E-02 |
| 39 | GO:0019843: rRNA binding | 1.99E-02 |
| 40 | GO:0005525: GTP binding | 2.25E-02 |
| 41 | GO:0005509: calcium ion binding | 2.56E-02 |
| 42 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 43 | GO:0008233: peptidase activity | 3.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070545: PeBoW complex | 1.31E-07 |
| 2 | GO:0005730: nucleolus | 6.63E-06 |
| 3 | GO:0030687: preribosome, large subunit precursor | 1.25E-05 |
| 4 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.02E-05 |
| 5 | GO:0005829: cytosol | 7.05E-05 |
| 6 | GO:0031080: nuclear pore outer ring | 1.95E-04 |
| 7 | GO:0046861: glyoxysomal membrane | 1.95E-04 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 4.38E-04 |
| 9 | GO:0005618: cell wall | 4.47E-04 |
| 10 | GO:0031428: box C/D snoRNP complex | 5.98E-04 |
| 11 | GO:0005742: mitochondrial outer membrane translocase complex | 1.09E-03 |
| 12 | GO:0009514: glyoxysome | 1.09E-03 |
| 13 | GO:0005834: heterotrimeric G-protein complex | 1.42E-03 |
| 14 | GO:0005774: vacuolar membrane | 1.50E-03 |
| 15 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.66E-03 |
| 16 | GO:0032040: small-subunit processome | 1.81E-03 |
| 17 | GO:0005759: mitochondrial matrix | 2.49E-03 |
| 18 | GO:0005741: mitochondrial outer membrane | 3.04E-03 |
| 19 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.63E-03 |
| 20 | GO:0009506: plasmodesma | 4.83E-03 |
| 21 | GO:0016592: mediator complex | 5.13E-03 |
| 22 | GO:0005783: endoplasmic reticulum | 5.14E-03 |
| 23 | GO:0005886: plasma membrane | 7.07E-03 |
| 24 | GO:0009505: plant-type cell wall | 7.09E-03 |
| 25 | GO:0019005: SCF ubiquitin ligase complex | 7.60E-03 |
| 26 | GO:0005773: vacuole | 1.22E-02 |
| 27 | GO:0009507: chloroplast | 1.37E-02 |
| 28 | GO:0005635: nuclear envelope | 1.39E-02 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 1.52E-02 |
| 30 | GO:0005777: peroxisome | 1.57E-02 |
| 31 | GO:0009570: chloroplast stroma | 1.67E-02 |
| 32 | GO:0005654: nucleoplasm | 1.95E-02 |
| 33 | GO:0048046: apoplast | 2.73E-02 |
| 34 | GO:0005840: ribosome | 2.91E-02 |
| 35 | GO:0005743: mitochondrial inner membrane | 4.98E-02 |