Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0010378: temperature compensation of the circadian clock0.00E+00
3GO:0010600: regulation of auxin biosynthetic process1.08E-06
4GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.23E-06
5GO:0009645: response to low light intensity stimulus5.90E-06
6GO:0010928: regulation of auxin mediated signaling pathway7.91E-06
7GO:0010218: response to far red light1.04E-05
8GO:0015812: gamma-aminobutyric acid transport2.88E-05
9GO:0032958: inositol phosphate biosynthetic process2.88E-05
10GO:0009585: red, far-red light phototransduction3.23E-05
11GO:0009768: photosynthesis, light harvesting in photosystem I6.29E-05
12GO:0048511: rhythmic process7.03E-05
13GO:0051170: nuclear import7.28E-05
14GO:0010017: red or far-red light signaling pathway7.80E-05
15GO:0007623: circadian rhythm1.26E-04
16GO:0006020: inositol metabolic process1.89E-04
17GO:0030104: water homeostasis2.57E-04
18GO:0018298: protein-chromophore linkage3.00E-04
19GO:0000160: phosphorelay signal transduction system3.15E-04
20GO:0048578: positive regulation of long-day photoperiodism, flowering3.30E-04
21GO:0045892: negative regulation of transcription, DNA-templated3.97E-04
22GO:0009861: jasmonic acid and ethylene-dependent systemic resistance4.86E-04
23GO:0010114: response to red light4.87E-04
24GO:0009644: response to high light intensity5.26E-04
25GO:0010161: red light signaling pathway5.68E-04
26GO:0009769: photosynthesis, light harvesting in photosystem II5.68E-04
27GO:0009704: de-etiolation6.55E-04
28GO:0010099: regulation of photomorphogenesis7.44E-04
29GO:0009827: plant-type cell wall modification7.44E-04
30GO:0090333: regulation of stomatal closure8.35E-04
31GO:0048354: mucilage biosynthetic process involved in seed coat development9.29E-04
32GO:0009641: shade avoidance1.03E-03
33GO:0055062: phosphate ion homeostasis1.03E-03
34GO:0009718: anthocyanin-containing compound biosynthetic process1.34E-03
35GO:0009266: response to temperature stimulus1.45E-03
36GO:0042023: DNA endoreduplication1.67E-03
37GO:0009269: response to desiccation2.04E-03
38GO:0003333: amino acid transmembrane transport2.04E-03
39GO:0009693: ethylene biosynthetic process2.30E-03
40GO:0071215: cellular response to abscisic acid stimulus2.30E-03
41GO:0080167: response to karrikin2.89E-03
42GO:0042752: regulation of circadian rhythm2.99E-03
43GO:0044550: secondary metabolite biosynthetic process3.14E-03
44GO:0015979: photosynthesis3.29E-03
45GO:1901657: glycosyl compound metabolic process3.58E-03
46GO:0009409: response to cold3.65E-03
47GO:0015995: chlorophyll biosynthetic process4.71E-03
48GO:0009817: defense response to fungus, incompatible interaction5.05E-03
49GO:0009637: response to blue light5.94E-03
50GO:0042542: response to hydrogen peroxide6.89E-03
51GO:0009640: photomorphogenesis7.08E-03
52GO:0008643: carbohydrate transport7.48E-03
53GO:0009416: response to light stimulus7.51E-03
54GO:0006355: regulation of transcription, DNA-templated7.56E-03
55GO:0006351: transcription, DNA-templated8.46E-03
56GO:0051603: proteolysis involved in cellular protein catabolic process8.92E-03
57GO:0006857: oligopeptide transport9.14E-03
58GO:0009909: regulation of flower development9.36E-03
59GO:0000398: mRNA splicing, via spliceosome1.23E-02
60GO:0009617: response to bacterium1.86E-02
61GO:0009658: chloroplast organization2.24E-02
62GO:0055114: oxidation-reduction process2.29E-02
63GO:0005975: carbohydrate metabolic process2.32E-02
64GO:0032259: methylation3.34E-02
65GO:0006629: lipid metabolic process3.45E-02
66GO:0009908: flower development4.82E-02
RankGO TermAdjusted P value
1GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
2GO:0047668: amygdalin beta-glucosidase activity0.00E+00
3GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
4GO:0004567: beta-mannosidase activity0.00E+00
5GO:0080082: esculin beta-glucosidase activity0.00E+00
6GO:0033857: diphosphoinositol-pentakisphosphate kinase activity2.88E-05
7GO:0000829: inositol heptakisphosphate kinase activity2.88E-05
8GO:0080079: cellobiose glucosidase activity2.88E-05
9GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding2.88E-05
10GO:0030371: translation repressor activity2.88E-05
11GO:0000828: inositol hexakisphosphate kinase activity2.88E-05
12GO:0015185: gamma-aminobutyric acid transmembrane transporter activity2.88E-05
13GO:0031409: pigment binding4.96E-05
14GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding7.28E-05
15GO:0015180: L-alanine transmembrane transporter activity7.28E-05
16GO:0000156: phosphorelay response regulator activity1.78E-04
17GO:0015189: L-lysine transmembrane transporter activity1.89E-04
18GO:0015181: arginine transmembrane transporter activity1.89E-04
19GO:0016168: chlorophyll binding2.42E-04
20GO:0005313: L-glutamate transmembrane transporter activity2.57E-04
21GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.30E-04
22GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.35E-04
23GO:0000989: transcription factor activity, transcription factor binding8.35E-04
24GO:0047372: acylglycerol lipase activity1.13E-03
25GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.15E-03
26GO:0004565: beta-galactosidase activity1.34E-03
27GO:0004022: alcohol dehydrogenase (NAD) activity1.34E-03
28GO:0004497: monooxygenase activity2.89E-03
29GO:0004197: cysteine-type endopeptidase activity3.43E-03
30GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.72E-03
31GO:0102483: scopolin beta-glucosidase activity4.71E-03
32GO:0008422: beta-glucosidase activity6.31E-03
33GO:0015171: amino acid transmembrane transporter activity9.36E-03
34GO:0008234: cysteine-type peptidase activity9.36E-03
35GO:0019825: oxygen binding1.07E-02
36GO:0005506: iron ion binding1.50E-02
37GO:0015297: antiporter activity1.59E-02
38GO:0005351: sugar:proton symporter activity1.62E-02
39GO:0008270: zinc ion binding1.65E-02
40GO:0005215: transporter activity1.69E-02
41GO:0046983: protein dimerization activity2.04E-02
42GO:0008168: methyltransferase activity2.18E-02
43GO:0020037: heme binding2.41E-02
44GO:0046872: metal ion binding3.08E-02
45GO:0016787: hydrolase activity3.27E-02
46GO:0004519: endonuclease activity3.66E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex4.35E-05
2GO:0010287: plastoglobule7.23E-05
3GO:0009522: photosystem I1.33E-04
4GO:0009517: PSII associated light-harvesting complex II2.57E-04
5GO:0005764: lysosome1.45E-03
6GO:0016020: membrane2.55E-03
7GO:0009523: photosystem II3.13E-03
8GO:0016021: integral component of membrane4.72E-03
9GO:0031966: mitochondrial membrane8.29E-03
10GO:0009579: thylakoid8.98E-03
11GO:0009534: chloroplast thylakoid9.07E-03
12GO:0016607: nuclear speck1.00E-02
13GO:0005654: nucleoplasm1.28E-02
14GO:0005623: cell1.33E-02
15GO:0005618: cell wall1.43E-02
16GO:0005615: extracellular space1.78E-02
17GO:0009505: plant-type cell wall1.91E-02
18GO:0009535: chloroplast thylakoid membrane3.42E-02
19GO:0005887: integral component of plasma membrane4.29E-02
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Gene type



Gene DE type