co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G10840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001142: nicotinate transport	0.00E+00
2	GO:0019428: allantoin biosynthetic process	0.00E+00
3	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
4	GO:0006721: terpenoid metabolic process	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
7	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
8	GO:0031349: positive regulation of defense response	1.45E-06
9	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.01E-06
10	GO:0072661: protein targeting to plasma membrane	5.37E-06
11	GO:0009863: salicylic acid mediated signaling pathway	3.31E-05
12	GO:0006099: tricarboxylic acid cycle	3.71E-05
13	GO:0018279: protein N-linked glycosylation via asparagine	3.73E-05
14	GO:0016998: cell wall macromolecule catabolic process	4.54E-05
15	GO:0010942: positive regulation of cell death	5.54E-05
16	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	7.74E-05
17	GO:0006102: isocitrate metabolic process	1.32E-04
18	GO:0006569: tryptophan catabolic process	1.73E-04
19	GO:0043687: post-translational protein modification	1.73E-04
20	GO:0046244: salicylic acid catabolic process	1.73E-04
21	GO:0060862: negative regulation of floral organ abscission	1.73E-04
22	GO:0006144: purine nucleobase metabolic process	1.73E-04
23	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.73E-04
24	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.73E-04
25	GO:0001560: regulation of cell growth by extracellular stimulus	1.73E-04
26	GO:0019628: urate catabolic process	1.73E-04
27	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.73E-04
28	GO:0042350: GDP-L-fucose biosynthetic process	1.73E-04
29	GO:0016487: farnesol metabolic process	1.73E-04
30	GO:0051245: negative regulation of cellular defense response	1.73E-04
31	GO:0015780: nucleotide-sugar transport	2.02E-04
32	GO:0042742: defense response to bacterium	2.66E-04
33	GO:0006032: chitin catabolic process	2.85E-04
34	GO:0043069: negative regulation of programmed cell death	2.85E-04
35	GO:0007051: spindle organization	3.92E-04
36	GO:0015865: purine nucleotide transport	3.92E-04
37	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.92E-04
38	GO:0031204: posttranslational protein targeting to membrane, translocation	3.92E-04
39	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.92E-04
40	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	3.92E-04
41	GO:0010618: aerenchyma formation	3.92E-04
42	GO:0006695: cholesterol biosynthetic process	3.92E-04
43	GO:0015031: protein transport	4.66E-04
44	GO:0006468: protein phosphorylation	4.74E-04
45	GO:0009617: response to bacterium	5.78E-04
46	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	6.40E-04
47	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.40E-04
48	GO:1900140: regulation of seedling development	6.40E-04
49	GO:0055074: calcium ion homeostasis	6.40E-04
50	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.40E-04
51	GO:0015783: GDP-fucose transport	6.40E-04
52	GO:0006011: UDP-glucose metabolic process	6.40E-04
53	GO:0008643: carbohydrate transport	6.68E-04
54	GO:0080147: root hair cell development	6.71E-04
55	GO:0006487: protein N-linked glycosylation	6.71E-04
56	GO:0009226: nucleotide-sugar biosynthetic process	9.13E-04
57	GO:0006612: protein targeting to membrane	9.13E-04
58	GO:0010148: transpiration	9.13E-04
59	GO:0071323: cellular response to chitin	9.13E-04
60	GO:0051289: protein homotetramerization	9.13E-04
61	GO:0000187: activation of MAPK activity	9.13E-04
62	GO:0002239: response to oomycetes	9.13E-04
63	GO:0046902: regulation of mitochondrial membrane permeability	9.13E-04
64	GO:0072334: UDP-galactose transmembrane transport	9.13E-04
65	GO:0010363: regulation of plant-type hypersensitive response	1.21E-03
66	GO:0033356: UDP-L-arabinose metabolic process	1.21E-03
67	GO:0009620: response to fungus	1.21E-03
68	GO:0060548: negative regulation of cell death	1.21E-03
69	GO:0009553: embryo sac development	1.31E-03
70	GO:0006952: defense response	1.50E-03
71	GO:0000304: response to singlet oxygen	1.54E-03
72	GO:0006090: pyruvate metabolic process	1.54E-03
73	GO:0030041: actin filament polymerization	1.54E-03
74	GO:0046283: anthocyanin-containing compound metabolic process	1.54E-03
75	GO:0006405: RNA export from nucleus	1.54E-03
76	GO:0006465: signal peptide processing	1.54E-03
77	GO:0002229: defense response to oomycetes	1.60E-03
78	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.89E-03
79	GO:0060918: auxin transport	1.89E-03
80	GO:0047484: regulation of response to osmotic stress	1.89E-03
81	GO:0000741: karyogamy	1.89E-03
82	GO:0000060: protein import into nucleus, translocation	1.89E-03
83	GO:0010555: response to mannitol	2.27E-03
84	GO:0010310: regulation of hydrogen peroxide metabolic process	2.27E-03
85	GO:2000067: regulation of root morphogenesis	2.27E-03
86	GO:0016126: sterol biosynthetic process	2.30E-03
87	GO:0006906: vesicle fusion	2.56E-03
88	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.67E-03
89	GO:0000082: G1/S transition of mitotic cell cycle	2.67E-03
90	GO:0071446: cellular response to salicylic acid stimulus	2.67E-03
91	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.09E-03
92	GO:0007186: G-protein coupled receptor signaling pathway	3.54E-03
93	GO:0010497: plasmodesmata-mediated intercellular transport	3.54E-03
94	GO:0010120: camalexin biosynthetic process	3.54E-03
95	GO:0010204: defense response signaling pathway, resistance gene-independent	3.54E-03
96	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.54E-03
97	GO:0009867: jasmonic acid mediated signaling pathway	3.78E-03
98	GO:0007338: single fertilization	4.00E-03
99	GO:2000280: regulation of root development	4.49E-03
100	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.49E-03
101	GO:0006887: exocytosis	4.49E-03
102	GO:0019684: photosynthesis, light reaction	5.52E-03
103	GO:0009682: induced systemic resistance	5.52E-03
104	GO:0052544: defense response by callose deposition in cell wall	5.52E-03
105	GO:0009750: response to fructose	5.52E-03
106	GO:0009684: indoleacetic acid biosynthetic process	5.52E-03
107	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.06E-03
108	GO:0006108: malate metabolic process	6.61E-03
109	GO:0016192: vesicle-mediated transport	6.61E-03
110	GO:0055085: transmembrane transport	7.31E-03
111	GO:0042343: indole glucosinolate metabolic process	7.79E-03
112	GO:0045454: cell redox homeostasis	7.80E-03
113	GO:0009626: plant-type hypersensitive response	8.25E-03
114	GO:0034976: response to endoplasmic reticulum stress	8.41E-03
115	GO:0000162: tryptophan biosynthetic process	8.41E-03
116	GO:0000027: ribosomal large subunit assembly	9.03E-03
117	GO:0050832: defense response to fungus	9.14E-03
118	GO:0009742: brassinosteroid mediated signaling pathway	9.89E-03
119	GO:0048278: vesicle docking	1.03E-02
120	GO:0015992: proton transport	1.03E-02
121	GO:0098542: defense response to other organism	1.03E-02
122	GO:0009814: defense response, incompatible interaction	1.10E-02
123	GO:0031348: negative regulation of defense response	1.10E-02
124	GO:0019748: secondary metabolic process	1.10E-02
125	GO:0009625: response to insect	1.17E-02
126	GO:0055114: oxidation-reduction process	1.19E-02
127	GO:0009306: protein secretion	1.24E-02
128	GO:0051028: mRNA transport	1.32E-02
129	GO:0010051: xylem and phloem pattern formation	1.39E-02
130	GO:0006606: protein import into nucleus	1.39E-02
131	GO:0010197: polar nucleus fusion	1.47E-02
132	GO:0006413: translational initiation	1.51E-02
133	GO:0009737: response to abscisic acid	1.51E-02
134	GO:0061025: membrane fusion	1.54E-02
135	GO:0006623: protein targeting to vacuole	1.62E-02
136	GO:0010183: pollen tube guidance	1.62E-02
137	GO:0009749: response to glucose	1.62E-02
138	GO:0010150: leaf senescence	1.62E-02
139	GO:0000302: response to reactive oxygen species	1.70E-02
140	GO:0016132: brassinosteroid biosynthetic process	1.70E-02
141	GO:0019761: glucosinolate biosynthetic process	1.78E-02
142	GO:0032502: developmental process	1.78E-02
143	GO:0007166: cell surface receptor signaling pathway	1.85E-02
144	GO:0009567: double fertilization forming a zygote and endosperm	1.95E-02
145	GO:0009555: pollen development	2.11E-02
146	GO:0000910: cytokinesis	2.12E-02
147	GO:0001666: response to hypoxia	2.21E-02
148	GO:0009615: response to virus	2.21E-02
149	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.30E-02
150	GO:0009409: response to cold	2.33E-02
151	GO:0009627: systemic acquired resistance	2.39E-02
152	GO:0009826: unidimensional cell growth	2.41E-02
153	GO:0030244: cellulose biosynthetic process	2.67E-02
154	GO:0008219: cell death	2.67E-02
155	GO:0009832: plant-type cell wall biogenesis	2.77E-02
156	GO:0006457: protein folding	2.91E-02
157	GO:0048527: lateral root development	2.96E-02
158	GO:0010119: regulation of stomatal movement	2.96E-02
159	GO:0009631: cold acclimation	2.96E-02
160	GO:0006511: ubiquitin-dependent protein catabolic process	3.09E-02
161	GO:0080167: response to karrikin	3.11E-02
162	GO:0045087: innate immune response	3.16E-02
163	GO:0010200: response to chitin	3.22E-02
164	GO:0009744: response to sucrose	3.79E-02
165	GO:0051707: response to other organism	3.79E-02
166	GO:0006886: intracellular protein transport	3.83E-02
167	GO:0031347: regulation of defense response	4.34E-02
168	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.34E-02
169	GO:0000165: MAPK cascade	4.34E-02
170	GO:0007165: signal transduction	4.36E-02
171	GO:0009664: plant-type cell wall organization	4.45E-02
172	GO:0009751: response to salicylic acid	4.51E-02
173	GO:0006364: rRNA processing	4.68E-02
174	GO:0010224: response to UV-B	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0009918: sterol delta7 reductase activity	0.00E+00
2	GO:0000247: C-8 sterol isomerase activity	0.00E+00
3	GO:0005212: structural constituent of eye lens	0.00E+00
4	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
5	GO:0047886: farnesol dehydrogenase activity	0.00E+00
6	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
7	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
8	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
9	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
10	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
11	GO:0090416: nicotinate transporter activity	0.00E+00
12	GO:0004164: diphthine synthase activity	0.00E+00
13	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.58E-10
14	GO:0004576: oligosaccharyl transferase activity	1.02E-07
15	GO:0004656: procollagen-proline 4-dioxygenase activity	8.03E-07
16	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.24E-05
17	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.39E-05
18	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.32E-04
19	GO:0004048: anthranilate phosphoribosyltransferase activity	1.73E-04
20	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.73E-04
21	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.73E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.73E-04
23	GO:0050577: GDP-L-fucose synthase activity	1.73E-04
24	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.73E-04
25	GO:0004568: chitinase activity	2.85E-04
26	GO:0016301: kinase activity	3.09E-04
27	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.92E-04
28	GO:0035241: protein-arginine omega-N monomethyltransferase activity	3.92E-04
29	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	3.92E-04
30	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.92E-04
31	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	3.92E-04
32	GO:0008061: chitin binding	5.46E-04
33	GO:0031683: G-protein beta/gamma-subunit complex binding	6.40E-04
34	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	6.40E-04
35	GO:0005457: GDP-fucose transmembrane transporter activity	6.40E-04
36	GO:0001664: G-protein coupled receptor binding	6.40E-04
37	GO:0008469: histone-arginine N-methyltransferase activity	6.40E-04
38	GO:0031418: L-ascorbic acid binding	6.71E-04
39	GO:0051287: NAD binding	7.70E-04
40	GO:0035529: NADH pyrophosphatase activity	9.13E-04
41	GO:0009678: hydrogen-translocating pyrophosphatase activity	9.13E-04
42	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	9.13E-04
43	GO:0000339: RNA cap binding	9.13E-04
44	GO:0004674: protein serine/threonine kinase activity	1.10E-03
45	GO:0004470: malic enzyme activity	1.21E-03
46	GO:0043495: protein anchor	1.21E-03
47	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.21E-03
48	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.21E-03
49	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.21E-03
50	GO:0050662: coenzyme binding	1.40E-03
51	GO:0047631: ADP-ribose diphosphatase activity	1.54E-03
52	GO:0005471: ATP:ADP antiporter activity	1.54E-03
53	GO:0005459: UDP-galactose transmembrane transporter activity	1.54E-03
54	GO:0008641: small protein activating enzyme activity	1.54E-03
55	GO:0000210: NAD+ diphosphatase activity	1.89E-03
56	GO:0008565: protein transporter activity	2.26E-03
57	GO:0008320: protein transmembrane transporter activity	2.67E-03
58	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.67E-03
59	GO:0004427: inorganic diphosphatase activity	2.67E-03
60	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.67E-03
61	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.99E-03
62	GO:0004708: MAP kinase kinase activity	3.09E-03
63	GO:0004564: beta-fructofuranosidase activity	3.09E-03
64	GO:0050897: cobalt ion binding	3.45E-03
65	GO:0000149: SNARE binding	4.12E-03
66	GO:0004575: sucrose alpha-glucosidase activity	4.49E-03
67	GO:0005484: SNAP receptor activity	4.86E-03
68	GO:0004713: protein tyrosine kinase activity	4.99E-03
69	GO:0008794: arsenate reductase (glutaredoxin) activity	5.52E-03
70	GO:0042803: protein homodimerization activity	8.28E-03
71	GO:0022857: transmembrane transporter activity	8.78E-03
72	GO:0051082: unfolded protein binding	9.33E-03
73	GO:0015035: protein disulfide oxidoreductase activity	9.61E-03
74	GO:0005524: ATP binding	1.01E-02
75	GO:0004707: MAP kinase activity	1.03E-02
76	GO:0033612: receptor serine/threonine kinase binding	1.03E-02
77	GO:0016779: nucleotidyltransferase activity	1.10E-02
78	GO:0009055: electron carrier activity	1.11E-02
79	GO:0008810: cellulase activity	1.17E-02
80	GO:0022891: substrate-specific transmembrane transporter activity	1.17E-02
81	GO:0003756: protein disulfide isomerase activity	1.24E-02
82	GO:0008514: organic anion transmembrane transporter activity	1.24E-02
83	GO:0005506: iron ion binding	1.45E-02
84	GO:0008536: Ran GTPase binding	1.47E-02
85	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.51E-02
86	GO:0015297: antiporter activity	1.54E-02
87	GO:0016853: isomerase activity	1.54E-02
88	GO:0005515: protein binding	1.58E-02
89	GO:0003824: catalytic activity	1.70E-02
90	GO:0003743: translation initiation factor activity	1.89E-02
91	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.04E-02
92	GO:0051213: dioxygenase activity	2.21E-02
93	GO:0008168: methyltransferase activity	2.41E-02
94	GO:0004806: triglyceride lipase activity	2.48E-02
95	GO:0030247: polysaccharide binding	2.48E-02
96	GO:0004672: protein kinase activity	2.62E-02
97	GO:0005096: GTPase activator activity	2.77E-02
98	GO:0004222: metalloendopeptidase activity	2.87E-02
99	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.96E-02
100	GO:0030145: manganese ion binding	2.96E-02
101	GO:0008233: peptidase activity	3.06E-02
102	GO:0005507: copper ion binding	3.27E-02
103	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.27E-02
104	GO:0004871: signal transducer activity	3.89E-02
105	GO:0005525: GTP binding	3.91E-02
106	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.01E-02
107	GO:0003735: structural constituent of ribosome	4.08E-02
108	GO:0005198: structural molecule activity	4.12E-02
109	GO:0003924: GTPase activity	4.57E-02
110	GO:0016298: lipase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0005783: endoplasmic reticulum	3.98E-10
4	GO:0008250: oligosaccharyltransferase complex	6.58E-10
5	GO:0005886: plasma membrane	6.54E-09
6	GO:0005774: vacuolar membrane	7.02E-07
7	GO:0016021: integral component of membrane	1.04E-06
8	GO:0005794: Golgi apparatus	2.72E-06
9	GO:0005789: endoplasmic reticulum membrane	3.46E-05
10	GO:0009504: cell plate	1.21E-04
11	GO:0005911: cell-cell junction	1.73E-04
12	GO:0045252: oxoglutarate dehydrogenase complex	1.73E-04
13	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	1.73E-04
14	GO:0005787: signal peptidase complex	1.73E-04
15	GO:0005788: endoplasmic reticulum lumen	2.43E-04
16	GO:0030134: ER to Golgi transport vesicle	3.92E-04
17	GO:0005768: endosome	8.74E-04
18	GO:0009506: plasmodesma	9.23E-04
19	GO:0005773: vacuole	1.34E-03
20	GO:0016020: membrane	1.87E-03
21	GO:0005851: eukaryotic translation initiation factor 2B complex	1.89E-03
22	GO:0000139: Golgi membrane	1.95E-03
23	GO:0031225: anchored component of membrane	2.57E-03
24	GO:0005802: trans-Golgi network	2.70E-03
25	GO:0022627: cytosolic small ribosomal subunit	3.87E-03
26	GO:0031901: early endosome membrane	4.00E-03
27	GO:0031090: organelle membrane	4.00E-03
28	GO:0010494: cytoplasmic stress granule	4.00E-03
29	GO:0030665: clathrin-coated vesicle membrane	4.49E-03
30	GO:0031201: SNARE complex	4.49E-03
31	GO:0017119: Golgi transport complex	4.99E-03
32	GO:0005740: mitochondrial envelope	4.99E-03
33	GO:0005618: cell wall	5.61E-03
34	GO:0031012: extracellular matrix	6.61E-03
35	GO:0005750: mitochondrial respiratory chain complex III	7.20E-03
36	GO:0030176: integral component of endoplasmic reticulum membrane	7.79E-03
37	GO:0005730: nucleolus	1.02E-02
38	GO:0005829: cytosol	1.11E-02
39	GO:0019898: extrinsic component of membrane	1.62E-02
40	GO:0032580: Golgi cisterna membrane	1.95E-02
41	GO:0022626: cytosolic ribosome	1.99E-02
42	GO:0009505: plant-type cell wall	2.07E-02
43	GO:0046658: anchored component of plasma membrane	2.14E-02
44	GO:0000932: P-body	2.21E-02
45	GO:0005643: nuclear pore	2.67E-02
46	GO:0031902: late endosome membrane	3.58E-02
47	GO:0090406: pollen tube	3.79E-02