Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G09820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009249: protein lipoylation0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:0042821: pyridoxal biosynthetic process0.00E+00
4GO:0005996: monosaccharide metabolic process0.00E+00
5GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
6GO:0009106: lipoate metabolic process0.00E+00
7GO:0006573: valine metabolic process0.00E+00
8GO:0090042: tubulin deacetylation0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0070125: mitochondrial translational elongation0.00E+00
11GO:0016117: carotenoid biosynthetic process4.16E-06
12GO:0006810: transport1.27E-05
13GO:0009773: photosynthetic electron transport in photosystem I1.48E-05
14GO:0009658: chloroplast organization2.66E-05
15GO:0019253: reductive pentose-phosphate cycle2.86E-05
16GO:0019464: glycine decarboxylation via glycine cleavage system3.11E-05
17GO:0006546: glycine catabolic process3.11E-05
18GO:0016123: xanthophyll biosynthetic process5.00E-05
19GO:0042026: protein refolding1.02E-04
20GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process2.06E-04
21GO:0006438: valyl-tRNA aminoacylation2.06E-04
22GO:0009443: pyridoxal 5'-phosphate salvage2.06E-04
23GO:0010480: microsporocyte differentiation2.06E-04
24GO:0006551: leucine metabolic process2.06E-04
25GO:0000066: mitochondrial ornithine transport2.06E-04
26GO:1900865: chloroplast RNA modification3.11E-04
27GO:0019684: photosynthesis, light reaction4.23E-04
28GO:0018119: peptidyl-cysteine S-nitrosylation4.23E-04
29GO:0010275: NAD(P)H dehydrogenase complex assembly4.62E-04
30GO:0080183: response to photooxidative stress4.62E-04
31GO:0030388: fructose 1,6-bisphosphate metabolic process4.62E-04
32GO:0009767: photosynthetic electron transport chain5.50E-04
33GO:0010020: chloroplast fission6.19E-04
34GO:0090506: axillary shoot meristem initiation7.52E-04
35GO:0006000: fructose metabolic process7.52E-04
36GO:0006518: peptide metabolic process7.52E-04
37GO:0006696: ergosterol biosynthetic process7.52E-04
38GO:0009744: response to sucrose8.26E-04
39GO:0061077: chaperone-mediated protein folding1.02E-03
40GO:0051085: chaperone mediated protein folding requiring cofactor1.07E-03
41GO:0010239: chloroplast mRNA processing1.07E-03
42GO:0006241: CTP biosynthetic process1.07E-03
43GO:0033014: tetrapyrrole biosynthetic process1.07E-03
44GO:0006165: nucleoside diphosphate phosphorylation1.07E-03
45GO:0006228: UTP biosynthetic process1.07E-03
46GO:0010731: protein glutathionylation1.07E-03
47GO:0016556: mRNA modification1.07E-03
48GO:0043572: plastid fission1.07E-03
49GO:2001141: regulation of RNA biosynthetic process1.07E-03
50GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.07E-03
51GO:0006730: one-carbon metabolic process1.12E-03
52GO:0080092: regulation of pollen tube growth1.12E-03
53GO:0046686: response to cadmium ion1.27E-03
54GO:0009765: photosynthesis, light harvesting1.43E-03
55GO:0006183: GTP biosynthetic process1.43E-03
56GO:0045727: positive regulation of translation1.43E-03
57GO:2000122: negative regulation of stomatal complex development1.43E-03
58GO:0009902: chloroplast relocation1.43E-03
59GO:0010037: response to carbon dioxide1.43E-03
60GO:0015976: carbon utilization1.43E-03
61GO:0006096: glycolytic process1.47E-03
62GO:0016120: carotene biosynthetic process1.81E-03
63GO:0009107: lipoate biosynthetic process1.81E-03
64GO:1902183: regulation of shoot apical meristem development1.81E-03
65GO:0016554: cytidine to uridine editing2.24E-03
66GO:0032973: amino acid export2.24E-03
67GO:0010190: cytochrome b6f complex assembly2.24E-03
68GO:0042549: photosystem II stabilization2.24E-03
69GO:0010067: procambium histogenesis2.69E-03
70GO:0009082: branched-chain amino acid biosynthetic process2.69E-03
71GO:0006458: 'de novo' protein folding2.69E-03
72GO:0017148: negative regulation of translation2.69E-03
73GO:0009099: valine biosynthetic process2.69E-03
74GO:0043090: amino acid import3.16E-03
75GO:0048437: floral organ development3.16E-03
76GO:0009409: response to cold3.21E-03
77GO:0048564: photosystem I assembly3.67E-03
78GO:0008610: lipid biosynthetic process3.67E-03
79GO:0016559: peroxisome fission3.67E-03
80GO:0006002: fructose 6-phosphate metabolic process4.20E-03
81GO:0071482: cellular response to light stimulus4.20E-03
82GO:0006075: (1->3)-beta-D-glucan biosynthetic process4.20E-03
83GO:0048193: Golgi vesicle transport4.20E-03
84GO:0009657: plastid organization4.20E-03
85GO:0009097: isoleucine biosynthetic process4.20E-03
86GO:0010100: negative regulation of photomorphogenesis4.20E-03
87GO:0006526: arginine biosynthetic process4.20E-03
88GO:0032544: plastid translation4.20E-03
89GO:0017004: cytochrome complex assembly4.20E-03
90GO:0010206: photosystem II repair4.75E-03
91GO:0080144: amino acid homeostasis4.75E-03
92GO:2000024: regulation of leaf development4.75E-03
93GO:0006783: heme biosynthetic process4.75E-03
94GO:0000902: cell morphogenesis4.75E-03
95GO:0009853: photorespiration4.84E-03
96GO:0006779: porphyrin-containing compound biosynthetic process5.32E-03
97GO:0010192: mucilage biosynthetic process5.93E-03
98GO:0009870: defense response signaling pathway, resistance gene-dependent5.93E-03
99GO:0006535: cysteine biosynthetic process from serine5.93E-03
100GO:0009089: lysine biosynthetic process via diaminopimelate6.55E-03
101GO:0009073: aromatic amino acid family biosynthetic process6.55E-03
102GO:0006415: translational termination6.55E-03
103GO:0006352: DNA-templated transcription, initiation6.55E-03
104GO:0000272: polysaccharide catabolic process6.55E-03
105GO:0048229: gametophyte development6.55E-03
106GO:0009636: response to toxic substance7.00E-03
107GO:0045037: protein import into chloroplast stroma7.20E-03
108GO:0005986: sucrose biosynthetic process7.87E-03
109GO:0006006: glucose metabolic process7.87E-03
110GO:0010075: regulation of meristem growth7.87E-03
111GO:0009725: response to hormone7.87E-03
112GO:0006094: gluconeogenesis7.87E-03
113GO:0010207: photosystem II assembly8.56E-03
114GO:0010223: secondary shoot formation8.56E-03
115GO:0009934: regulation of meristem structural organization8.56E-03
116GO:0007031: peroxisome organization9.27E-03
117GO:0090351: seedling development9.27E-03
118GO:0046777: protein autophosphorylation9.28E-03
119GO:0006636: unsaturated fatty acid biosynthetic process1.00E-02
120GO:0009833: plant-type primary cell wall biogenesis1.00E-02
121GO:0015979: photosynthesis1.01E-02
122GO:0019344: cysteine biosynthetic process1.08E-02
123GO:0009944: polarity specification of adaxial/abaxial axis1.08E-02
124GO:0016575: histone deacetylation1.15E-02
125GO:0006418: tRNA aminoacylation for protein translation1.15E-02
126GO:0007017: microtubule-based process1.15E-02
127GO:0007005: mitochondrion organization1.32E-02
128GO:0001944: vasculature development1.40E-02
129GO:0010089: xylem development1.48E-02
130GO:0048653: anther development1.66E-02
131GO:0042631: cellular response to water deprivation1.66E-02
132GO:0010087: phloem or xylem histogenesis1.66E-02
133GO:0008360: regulation of cell shape1.75E-02
134GO:0019252: starch biosynthetic process1.94E-02
135GO:0080156: mitochondrial mRNA modification2.03E-02
136GO:0007623: circadian rhythm2.08E-02
137GO:0010583: response to cyclopentenone2.13E-02
138GO:0010286: heat acclimation2.43E-02
139GO:0055114: oxidation-reduction process2.49E-02
140GO:0010027: thylakoid membrane organization2.64E-02
141GO:0009793: embryo development ending in seed dormancy2.66E-02
142GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.75E-02
143GO:0042128: nitrate assimilation2.86E-02
144GO:0009627: systemic acquired resistance2.86E-02
145GO:0009416: response to light stimulus2.88E-02
146GO:0009817: defense response to fungus, incompatible interaction3.19E-02
147GO:0048481: plant ovule development3.19E-02
148GO:0030244: cellulose biosynthetic process3.19E-02
149GO:0008219: cell death3.19E-02
150GO:0009832: plant-type cell wall biogenesis3.31E-02
151GO:0009407: toxin catabolic process3.42E-02
152GO:0010119: regulation of stomatal movement3.54E-02
153GO:0016051: carbohydrate biosynthetic process3.78E-02
154GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.12E-02
155GO:0006839: mitochondrial transport4.15E-02
156GO:0006631: fatty acid metabolic process4.27E-02
157GO:0045454: cell redox homeostasis4.75E-02
158GO:0008643: carbohydrate transport4.78E-02
RankGO TermAdjusted P value
1GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
2GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
3GO:0051721: protein phosphatase 2A binding0.00E+00
4GO:0042903: tubulin deacetylase activity0.00E+00
5GO:0045435: lycopene epsilon cyclase activity0.00E+00
6GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
7GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
8GO:0046905: phytoene synthase activity0.00E+00
9GO:0043014: alpha-tubulin binding0.00E+00
10GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
11GO:0004358: glutamate N-acetyltransferase activity0.00E+00
12GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
13GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
14GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.01E-06
15GO:0004375: glycine dehydrogenase (decarboxylating) activity1.69E-05
16GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.02E-04
17GO:0003867: 4-aminobutyrate transaminase activity2.06E-04
18GO:0004325: ferrochelatase activity2.06E-04
19GO:0051996: squalene synthase activity2.06E-04
20GO:0010313: phytochrome binding2.06E-04
21GO:0003984: acetolactate synthase activity2.06E-04
22GO:0004832: valine-tRNA ligase activity2.06E-04
23GO:0005089: Rho guanyl-nucleotide exchange factor activity4.23E-04
24GO:0044183: protein binding involved in protein folding4.23E-04
25GO:0004047: aminomethyltransferase activity4.62E-04
26GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.62E-04
27GO:0000064: L-ornithine transmembrane transporter activity4.62E-04
28GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity4.62E-04
29GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.62E-04
30GO:0008967: phosphoglycolate phosphatase activity4.62E-04
31GO:0004310: farnesyl-diphosphate farnesyltransferase activity4.62E-04
32GO:0050017: L-3-cyanoalanine synthase activity4.62E-04
33GO:0010291: carotene beta-ring hydroxylase activity4.62E-04
34GO:0017118: lipoyltransferase activity4.62E-04
35GO:0042389: omega-3 fatty acid desaturase activity4.62E-04
36GO:0004618: phosphoglycerate kinase activity4.62E-04
37GO:0010297: heteropolysaccharide binding4.62E-04
38GO:0016415: octanoyltransferase activity4.62E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity7.52E-04
40GO:0070402: NADPH binding7.52E-04
41GO:0005528: FK506 binding8.52E-04
42GO:0033612: receptor serine/threonine kinase binding1.02E-03
43GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.07E-03
44GO:0048027: mRNA 5'-UTR binding1.07E-03
45GO:0048487: beta-tubulin binding1.07E-03
46GO:0016149: translation release factor activity, codon specific1.07E-03
47GO:0004550: nucleoside diphosphate kinase activity1.07E-03
48GO:0004300: enoyl-CoA hydratase activity1.07E-03
49GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.07E-03
50GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.43E-03
51GO:0016987: sigma factor activity1.43E-03
52GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.43E-03
53GO:0001053: plastid sigma factor activity1.43E-03
54GO:0008374: O-acyltransferase activity1.81E-03
55GO:0051082: unfolded protein binding1.86E-03
56GO:0080030: methyl indole-3-acetate esterase activity2.24E-03
57GO:0042578: phosphoric ester hydrolase activity2.24E-03
58GO:0004124: cysteine synthase activity2.69E-03
59GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.69E-03
60GO:0016597: amino acid binding2.77E-03
61GO:0043295: glutathione binding3.16E-03
62GO:0004519: endonuclease activity3.54E-03
63GO:0004033: aldo-keto reductase (NADP) activity3.67E-03
64GO:0003843: 1,3-beta-D-glucan synthase activity4.20E-03
65GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)4.20E-03
66GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.20E-03
67GO:0004222: metalloendopeptidase activity4.21E-03
68GO:0003747: translation release factor activity4.75E-03
69GO:0005509: calcium ion binding5.47E-03
70GO:0004364: glutathione transferase activity5.99E-03
71GO:0043621: protein self-association6.74E-03
72GO:0051537: 2 iron, 2 sulfur cluster binding6.74E-03
73GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.27E-03
74GO:0004565: beta-galactosidase activity7.87E-03
75GO:0004089: carbonate dehydratase activity7.87E-03
76GO:0031072: heat shock protein binding7.87E-03
77GO:0003887: DNA-directed DNA polymerase activity1.00E-02
78GO:0004407: histone deacetylase activity1.08E-02
79GO:0004176: ATP-dependent peptidase activity1.23E-02
80GO:0016760: cellulose synthase (UDP-forming) activity1.40E-02
81GO:0003756: protein disulfide isomerase activity1.48E-02
82GO:0019843: rRNA binding1.50E-02
83GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.54E-02
84GO:0005102: receptor binding1.57E-02
85GO:0004812: aminoacyl-tRNA ligase activity1.57E-02
86GO:0050662: coenzyme binding1.84E-02
87GO:0004872: receptor activity1.94E-02
88GO:0048038: quinone binding2.03E-02
89GO:0004518: nuclease activity2.13E-02
90GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.23E-02
91GO:0003684: damaged DNA binding2.33E-02
92GO:0016759: cellulose synthase activity2.33E-02
93GO:0008483: transaminase activity2.43E-02
94GO:0008237: metallopeptidase activity2.43E-02
95GO:0005200: structural constituent of cytoskeleton2.43E-02
96GO:0003824: catalytic activity2.47E-02
97GO:0042802: identical protein binding2.64E-02
98GO:0009931: calcium-dependent protein serine/threonine kinase activity2.86E-02
99GO:0004683: calmodulin-dependent protein kinase activity2.97E-02
100GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.08E-02
101GO:0008236: serine-type peptidase activity3.08E-02
102GO:0050897: cobalt ion binding3.54E-02
103GO:0003746: translation elongation factor activity3.78E-02
104GO:0000987: core promoter proximal region sequence-specific DNA binding3.90E-02
105GO:0050661: NADP binding4.15E-02
106GO:0005198: structural molecule activity4.91E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
2GO:0005948: acetolactate synthase complex0.00E+00
3GO:0009507: chloroplast1.60E-37
4GO:0009535: chloroplast thylakoid membrane2.11E-14
5GO:0009570: chloroplast stroma4.05E-12
6GO:0009543: chloroplast thylakoid lumen6.97E-12
7GO:0009941: chloroplast envelope1.54E-11
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.57E-10
9GO:0009654: photosystem II oxygen evolving complex2.47E-08
10GO:0009579: thylakoid2.32E-07
11GO:0010319: stromule5.05E-07
12GO:0030095: chloroplast photosystem II5.58E-07
13GO:0019898: extrinsic component of membrane8.00E-06
14GO:0005960: glycine cleavage complex1.69E-05
15GO:0031969: chloroplast membrane4.69E-05
16GO:0031977: thylakoid lumen7.57E-05
17GO:0009534: chloroplast thylakoid1.37E-04
18GO:0000427: plastid-encoded plastid RNA polymerase complex4.62E-04
19GO:0045254: pyruvate dehydrogenase complex4.62E-04
20GO:0042170: plastid membrane4.62E-04
21GO:0005759: mitochondrial matrix5.59E-04
22GO:0048046: apoplast9.75E-04
23GO:0055035: plastid thylakoid membrane1.81E-03
24GO:0009706: chloroplast inner membrane1.86E-03
25GO:0005779: integral component of peroxisomal membrane4.20E-03
26GO:0000148: 1,3-beta-D-glucan synthase complex4.20E-03
27GO:0009539: photosystem II reaction center4.20E-03
28GO:0045298: tubulin complex4.75E-03
29GO:0016324: apical plasma membrane5.93E-03
30GO:0009508: plastid chromosome7.87E-03
31GO:0005758: mitochondrial intermembrane space1.08E-02
32GO:0042651: thylakoid membrane1.15E-02
33GO:0009532: plastid stroma1.23E-02
34GO:0010287: plastoglobule1.42E-02
35GO:0005623: cell1.54E-02
36GO:0009523: photosystem II1.94E-02
37GO:0009295: nucleoid2.43E-02
38GO:0005778: peroxisomal membrane2.43E-02
39GO:0009536: plastid2.91E-02
40GO:0009707: chloroplast outer membrane3.19E-02
41GO:0005874: microtubule3.85E-02
42GO:0005739: mitochondrion4.22E-02
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Gene type



Gene DE type