GO Enrichment Analysis of Co-expressed Genes with
AT5G09660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 2 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 3 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 4 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 5 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 6 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 7 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 8 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 9 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.15E-08 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.65E-06 |
| 11 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.65E-06 |
| 12 | GO:0006094: gluconeogenesis | 6.82E-06 |
| 13 | GO:0005986: sucrose biosynthetic process | 6.82E-06 |
| 14 | GO:0019253: reductive pentose-phosphate cycle | 8.47E-06 |
| 15 | GO:0006546: glycine catabolic process | 1.25E-05 |
| 16 | GO:0009853: photorespiration | 1.27E-05 |
| 17 | GO:0006810: transport | 3.50E-05 |
| 18 | GO:0046686: response to cadmium ion | 4.24E-05 |
| 19 | GO:0048564: photosystem I assembly | 7.70E-05 |
| 20 | GO:0006098: pentose-phosphate shunt | 1.20E-04 |
| 21 | GO:0006723: cuticle hydrocarbon biosynthetic process | 1.22E-04 |
| 22 | GO:0006659: phosphatidylserine biosynthetic process | 1.22E-04 |
| 23 | GO:0010028: xanthophyll cycle | 1.22E-04 |
| 24 | GO:0051180: vitamin transport | 1.22E-04 |
| 25 | GO:0030974: thiamine pyrophosphate transport | 1.22E-04 |
| 26 | GO:0009767: photosynthetic electron transport chain | 2.65E-04 |
| 27 | GO:0097054: L-glutamate biosynthetic process | 2.82E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.82E-04 |
| 29 | GO:0042819: vitamin B6 biosynthetic process | 2.82E-04 |
| 30 | GO:0015893: drug transport | 2.82E-04 |
| 31 | GO:0009658: chloroplast organization | 4.04E-04 |
| 32 | GO:0055114: oxidation-reduction process | 4.22E-04 |
| 33 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.61E-04 |
| 34 | GO:0005977: glycogen metabolic process | 4.65E-04 |
| 35 | GO:0006011: UDP-glucose metabolic process | 4.65E-04 |
| 36 | GO:0000913: preprophase band assembly | 4.65E-04 |
| 37 | GO:0031022: nuclear migration along microfilament | 4.65E-04 |
| 38 | GO:0006000: fructose metabolic process | 4.65E-04 |
| 39 | GO:0043447: alkane biosynthetic process | 4.65E-04 |
| 40 | GO:0006096: glycolytic process | 5.88E-04 |
| 41 | GO:0032877: positive regulation of DNA endoreduplication | 6.66E-04 |
| 42 | GO:0006537: glutamate biosynthetic process | 6.66E-04 |
| 43 | GO:0008615: pyridoxine biosynthetic process | 6.66E-04 |
| 44 | GO:0010731: protein glutathionylation | 6.66E-04 |
| 45 | GO:0006520: cellular amino acid metabolic process | 8.17E-04 |
| 46 | GO:0006021: inositol biosynthetic process | 8.84E-04 |
| 47 | GO:0009902: chloroplast relocation | 8.84E-04 |
| 48 | GO:0019676: ammonia assimilation cycle | 8.84E-04 |
| 49 | GO:0051781: positive regulation of cell division | 8.84E-04 |
| 50 | GO:0015994: chlorophyll metabolic process | 8.84E-04 |
| 51 | GO:0009791: post-embryonic development | 9.36E-04 |
| 52 | GO:0009904: chloroplast accumulation movement | 1.12E-03 |
| 53 | GO:0009247: glycolipid biosynthetic process | 1.12E-03 |
| 54 | GO:0016120: carotene biosynthetic process | 1.12E-03 |
| 55 | GO:0006544: glycine metabolic process | 1.12E-03 |
| 56 | GO:0043097: pyrimidine nucleoside salvage | 1.12E-03 |
| 57 | GO:0030163: protein catabolic process | 1.13E-03 |
| 58 | GO:0010942: positive regulation of cell death | 1.37E-03 |
| 59 | GO:0006563: L-serine metabolic process | 1.37E-03 |
| 60 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.37E-03 |
| 61 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.37E-03 |
| 62 | GO:0006206: pyrimidine nucleobase metabolic process | 1.37E-03 |
| 63 | GO:0009903: chloroplast avoidance movement | 1.64E-03 |
| 64 | GO:0009854: oxidative photosynthetic carbon pathway | 1.64E-03 |
| 65 | GO:0042026: protein refolding | 1.64E-03 |
| 66 | GO:0006458: 'de novo' protein folding | 1.64E-03 |
| 67 | GO:0042742: defense response to bacterium | 1.70E-03 |
| 68 | GO:0018298: protein-chromophore linkage | 1.84E-03 |
| 69 | GO:0009645: response to low light intensity stimulus | 1.92E-03 |
| 70 | GO:0010196: nonphotochemical quenching | 1.92E-03 |
| 71 | GO:0019375: galactolipid biosynthetic process | 2.22E-03 |
| 72 | GO:0009704: de-etiolation | 2.22E-03 |
| 73 | GO:0009231: riboflavin biosynthetic process | 2.22E-03 |
| 74 | GO:0052543: callose deposition in cell wall | 2.22E-03 |
| 75 | GO:0008610: lipid biosynthetic process | 2.22E-03 |
| 76 | GO:0009850: auxin metabolic process | 2.22E-03 |
| 77 | GO:0009416: response to light stimulus | 2.40E-03 |
| 78 | GO:0006002: fructose 6-phosphate metabolic process | 2.54E-03 |
| 79 | GO:0071482: cellular response to light stimulus | 2.54E-03 |
| 80 | GO:0000373: Group II intron splicing | 2.87E-03 |
| 81 | GO:0009056: catabolic process | 2.87E-03 |
| 82 | GO:0098656: anion transmembrane transport | 2.87E-03 |
| 83 | GO:0009821: alkaloid biosynthetic process | 2.87E-03 |
| 84 | GO:0010206: photosystem II repair | 2.87E-03 |
| 85 | GO:0009744: response to sucrose | 2.99E-03 |
| 86 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 3.21E-03 |
| 87 | GO:0010205: photoinhibition | 3.21E-03 |
| 88 | GO:0035999: tetrahydrofolate interconversion | 3.21E-03 |
| 89 | GO:0031425: chloroplast RNA processing | 3.21E-03 |
| 90 | GO:0080167: response to karrikin | 3.32E-03 |
| 91 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.94E-03 |
| 92 | GO:0009773: photosynthetic electron transport in photosystem I | 3.94E-03 |
| 93 | GO:0071365: cellular response to auxin stimulus | 4.32E-03 |
| 94 | GO:0006006: glucose metabolic process | 4.71E-03 |
| 95 | GO:0042343: indole glucosinolate metabolic process | 5.54E-03 |
| 96 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.98E-03 |
| 97 | GO:0010025: wax biosynthetic process | 5.98E-03 |
| 98 | GO:0006289: nucleotide-excision repair | 6.42E-03 |
| 99 | GO:0007017: microtubule-based process | 6.87E-03 |
| 100 | GO:0098542: defense response to other organism | 7.34E-03 |
| 101 | GO:0061077: chaperone-mediated protein folding | 7.34E-03 |
| 102 | GO:0009058: biosynthetic process | 7.52E-03 |
| 103 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.81E-03 |
| 104 | GO:0080092: regulation of pollen tube growth | 7.81E-03 |
| 105 | GO:0016226: iron-sulfur cluster assembly | 7.81E-03 |
| 106 | GO:0016117: carotenoid biosynthetic process | 9.31E-03 |
| 107 | GO:0042631: cellular response to water deprivation | 9.83E-03 |
| 108 | GO:0042335: cuticle development | 9.83E-03 |
| 109 | GO:0009735: response to cytokinin | 1.01E-02 |
| 110 | GO:0015986: ATP synthesis coupled proton transport | 1.09E-02 |
| 111 | GO:0007018: microtubule-based movement | 1.09E-02 |
| 112 | GO:0006814: sodium ion transport | 1.09E-02 |
| 113 | GO:0009646: response to absence of light | 1.09E-02 |
| 114 | GO:0009409: response to cold | 1.11E-02 |
| 115 | GO:0019252: starch biosynthetic process | 1.15E-02 |
| 116 | GO:0008654: phospholipid biosynthetic process | 1.15E-02 |
| 117 | GO:0002229: defense response to oomycetes | 1.20E-02 |
| 118 | GO:0000302: response to reactive oxygen species | 1.20E-02 |
| 119 | GO:0048235: pollen sperm cell differentiation | 1.26E-02 |
| 120 | GO:0016032: viral process | 1.26E-02 |
| 121 | GO:0000910: cytokinesis | 1.50E-02 |
| 122 | GO:0010027: thylakoid membrane organization | 1.56E-02 |
| 123 | GO:0001666: response to hypoxia | 1.56E-02 |
| 124 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 125 | GO:0010311: lateral root formation | 1.95E-02 |
| 126 | GO:0010218: response to far red light | 2.02E-02 |
| 127 | GO:0015979: photosynthesis | 2.17E-02 |
| 128 | GO:0016051: carbohydrate biosynthetic process | 2.23E-02 |
| 129 | GO:0009637: response to blue light | 2.23E-02 |
| 130 | GO:0006839: mitochondrial transport | 2.44E-02 |
| 131 | GO:0032259: methylation | 2.69E-02 |
| 132 | GO:0000209: protein polyubiquitination | 2.75E-02 |
| 133 | GO:0009644: response to high light intensity | 2.82E-02 |
| 134 | GO:0009636: response to toxic substance | 2.90E-02 |
| 135 | GO:0006855: drug transmembrane transport | 2.98E-02 |
| 136 | GO:0042538: hyperosmotic salinity response | 3.14E-02 |
| 137 | GO:0010224: response to UV-B | 3.38E-02 |
| 138 | GO:0006417: regulation of translation | 3.55E-02 |
| 139 | GO:0009626: plant-type hypersensitive response | 3.89E-02 |
| 140 | GO:0018105: peptidyl-serine phosphorylation | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 2 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 7 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 8 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 9 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 10 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 11 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 12 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 13 | GO:0050307: sucrose-phosphate phosphatase activity | 2.83E-06 |
| 14 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.65E-06 |
| 15 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.25E-05 |
| 16 | GO:0004332: fructose-bisphosphate aldolase activity | 3.11E-05 |
| 17 | GO:0048038: quinone binding | 6.47E-05 |
| 18 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.22E-04 |
| 19 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.22E-04 |
| 20 | GO:0090422: thiamine pyrophosphate transporter activity | 1.22E-04 |
| 21 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.22E-04 |
| 22 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 1.22E-04 |
| 23 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.22E-04 |
| 24 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 2.82E-04 |
| 25 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.82E-04 |
| 26 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.82E-04 |
| 27 | GO:0004512: inositol-3-phosphate synthase activity | 2.82E-04 |
| 28 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 2.82E-04 |
| 29 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.82E-04 |
| 30 | GO:0008967: phosphoglycolate phosphatase activity | 2.82E-04 |
| 31 | GO:0008266: poly(U) RNA binding | 3.00E-04 |
| 32 | GO:0031409: pigment binding | 3.77E-04 |
| 33 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 4.65E-04 |
| 34 | GO:0032947: protein complex scaffold | 4.65E-04 |
| 35 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.65E-04 |
| 36 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 4.65E-04 |
| 37 | GO:0003935: GTP cyclohydrolase II activity | 4.65E-04 |
| 38 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.66E-04 |
| 39 | GO:0008508: bile acid:sodium symporter activity | 6.66E-04 |
| 40 | GO:0035250: UDP-galactosyltransferase activity | 6.66E-04 |
| 41 | GO:0008453: alanine-glyoxylate transaminase activity | 8.84E-04 |
| 42 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.12E-03 |
| 43 | GO:0004372: glycine hydroxymethyltransferase activity | 1.12E-03 |
| 44 | GO:0042578: phosphoric ester hydrolase activity | 1.37E-03 |
| 45 | GO:0016168: chlorophyll binding | 1.50E-03 |
| 46 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.64E-03 |
| 47 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.64E-03 |
| 48 | GO:0004849: uridine kinase activity | 1.64E-03 |
| 49 | GO:0004222: metalloendopeptidase activity | 2.03E-03 |
| 50 | GO:0043022: ribosome binding | 2.22E-03 |
| 51 | GO:0003746: translation elongation factor activity | 2.33E-03 |
| 52 | GO:0008135: translation factor activity, RNA binding | 2.54E-03 |
| 53 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.54E-03 |
| 54 | GO:0016844: strictosidine synthase activity | 3.21E-03 |
| 55 | GO:0051287: NAD binding | 3.61E-03 |
| 56 | GO:0044183: protein binding involved in protein folding | 3.94E-03 |
| 57 | GO:0015386: potassium:proton antiporter activity | 3.94E-03 |
| 58 | GO:0004860: protein kinase inhibitor activity | 3.94E-03 |
| 59 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.94E-03 |
| 60 | GO:0003777: microtubule motor activity | 4.44E-03 |
| 61 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.71E-03 |
| 62 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 63 | GO:0005525: GTP binding | 5.11E-03 |
| 64 | GO:0051082: unfolded protein binding | 5.71E-03 |
| 65 | GO:0051536: iron-sulfur cluster binding | 6.42E-03 |
| 66 | GO:0016787: hydrolase activity | 6.46E-03 |
| 67 | GO:0043424: protein histidine kinase binding | 6.87E-03 |
| 68 | GO:0015079: potassium ion transmembrane transporter activity | 6.87E-03 |
| 69 | GO:0004176: ATP-dependent peptidase activity | 7.34E-03 |
| 70 | GO:0008514: organic anion transmembrane transporter activity | 8.80E-03 |
| 71 | GO:0003756: protein disulfide isomerase activity | 8.80E-03 |
| 72 | GO:0016491: oxidoreductase activity | 1.06E-02 |
| 73 | GO:0008194: UDP-glycosyltransferase activity | 1.10E-02 |
| 74 | GO:0004518: nuclease activity | 1.26E-02 |
| 75 | GO:0008237: metallopeptidase activity | 1.44E-02 |
| 76 | GO:0008168: methyltransferase activity | 1.47E-02 |
| 77 | GO:0000287: magnesium ion binding | 1.50E-02 |
| 78 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.69E-02 |
| 79 | GO:0004683: calmodulin-dependent protein kinase activity | 1.75E-02 |
| 80 | GO:0015238: drug transmembrane transporter activity | 1.95E-02 |
| 81 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 82 | GO:0042803: protein homodimerization activity | 2.38E-02 |
| 83 | GO:0050661: NADP binding | 2.44E-02 |
| 84 | GO:0004364: glutathione transferase activity | 2.59E-02 |
| 85 | GO:0005506: iron ion binding | 2.69E-02 |
| 86 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.82E-02 |
| 87 | GO:0005198: structural molecule activity | 2.90E-02 |
| 88 | GO:0003824: catalytic activity | 3.08E-02 |
| 89 | GO:0005215: transporter activity | 3.11E-02 |
| 90 | GO:0005515: protein binding | 3.13E-02 |
| 91 | GO:0031625: ubiquitin protein ligase binding | 3.55E-02 |
| 92 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.98E-02 |
| 93 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.98E-02 |
| 94 | GO:0016874: ligase activity | 4.06E-02 |
| 95 | GO:0022857: transmembrane transporter activity | 4.06E-02 |
| 96 | GO:0016887: ATPase activity | 4.33E-02 |
| 97 | GO:0016758: transferase activity, transferring hexosyl groups | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.04E-34 |
| 2 | GO:0009941: chloroplast envelope | 2.39E-19 |
| 3 | GO:0009570: chloroplast stroma | 3.03E-12 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.86E-11 |
| 5 | GO:0009534: chloroplast thylakoid | 3.87E-10 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.22E-08 |
| 7 | GO:0048046: apoplast | 4.53E-07 |
| 8 | GO:0009579: thylakoid | 1.42E-06 |
| 9 | GO:0005960: glycine cleavage complex | 6.65E-06 |
| 10 | GO:0031969: chloroplast membrane | 7.41E-05 |
| 11 | GO:0010319: stromule | 9.50E-05 |
| 12 | GO:0010287: plastoglobule | 1.03E-04 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.22E-04 |
| 14 | GO:0009782: photosystem I antenna complex | 1.22E-04 |
| 15 | GO:0030076: light-harvesting complex | 3.37E-04 |
| 16 | GO:0009509: chromoplast | 4.65E-04 |
| 17 | GO:0016020: membrane | 5.57E-04 |
| 18 | GO:0009706: chloroplast inner membrane | 7.42E-04 |
| 19 | GO:0030286: dynein complex | 8.84E-04 |
| 20 | GO:0009512: cytochrome b6f complex | 1.12E-03 |
| 21 | GO:0005759: mitochondrial matrix | 1.30E-03 |
| 22 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.37E-03 |
| 23 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.64E-03 |
| 24 | GO:0019013: viral nucleocapsid | 4.71E-03 |
| 25 | GO:0009508: plastid chromosome | 4.71E-03 |
| 26 | GO:0030095: chloroplast photosystem II | 5.12E-03 |
| 27 | GO:0005875: microtubule associated complex | 5.98E-03 |
| 28 | GO:0009654: photosystem II oxygen evolving complex | 6.87E-03 |
| 29 | GO:0009543: chloroplast thylakoid lumen | 7.14E-03 |
| 30 | GO:0005623: cell | 7.33E-03 |
| 31 | GO:0005871: kinesin complex | 9.31E-03 |
| 32 | GO:0009522: photosystem I | 1.09E-02 |
| 33 | GO:0009523: photosystem II | 1.15E-02 |
| 34 | GO:0019898: extrinsic component of membrane | 1.15E-02 |
| 35 | GO:0009504: cell plate | 1.15E-02 |
| 36 | GO:0005694: chromosome | 1.26E-02 |
| 37 | GO:0009295: nucleoid | 1.44E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.56E-02 |
| 39 | GO:0019005: SCF ubiquitin ligase complex | 1.88E-02 |
| 40 | GO:0009707: chloroplast outer membrane | 1.88E-02 |
| 41 | GO:0005819: spindle | 2.37E-02 |
| 42 | GO:0031977: thylakoid lumen | 2.52E-02 |
| 43 | GO:0009536: plastid | 3.54E-02 |
| 44 | GO:0005829: cytosol | 3.60E-02 |
| 45 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 46 | GO:0012505: endomembrane system | 4.15E-02 |
| 47 | GO:0022626: cytosolic ribosome | 4.74E-02 |