Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G08335

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080180: 2-methylguanosine metabolic process0.00E+00
2GO:0046109: uridine biosynthetic process0.00E+00
3GO:0006858: extracellular transport0.00E+00
4GO:0010360: negative regulation of anion channel activity0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0006983: ER overload response0.00E+00
7GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
8GO:0007141: male meiosis I0.00E+00
9GO:0010793: regulation of mRNA export from nucleus0.00E+00
10GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
11GO:0048227: plasma membrane to endosome transport0.00E+00
12GO:0000188: inactivation of MAPK activity0.00E+00
13GO:0043069: negative regulation of programmed cell death4.43E-07
14GO:0006212: uracil catabolic process3.77E-06
15GO:0019483: beta-alanine biosynthetic process3.77E-06
16GO:0043562: cellular response to nitrogen levels1.02E-05
17GO:0000266: mitochondrial fission4.01E-05
18GO:0009697: salicylic acid biosynthetic process8.61E-05
19GO:0018344: protein geranylgeranylation8.61E-05
20GO:0006014: D-ribose metabolic process1.25E-04
21GO:0016559: peroxisome fission2.83E-04
22GO:0051245: negative regulation of cellular defense response2.87E-04
23GO:0019567: arabinose biosynthetic process2.87E-04
24GO:1990022: RNA polymerase III complex localization to nucleus2.87E-04
25GO:0044376: RNA polymerase II complex import to nucleus2.87E-04
26GO:0035344: hypoxanthine transport2.87E-04
27GO:1902361: mitochondrial pyruvate transmembrane transport2.87E-04
28GO:1902065: response to L-glutamate2.87E-04
29GO:0010265: SCF complex assembly2.87E-04
30GO:0098721: uracil import across plasma membrane2.87E-04
31GO:0006144: purine nucleobase metabolic process2.87E-04
32GO:0098702: adenine import across plasma membrane2.87E-04
33GO:0098710: guanine import across plasma membrane2.87E-04
34GO:0019628: urate catabolic process2.87E-04
35GO:0006623: protein targeting to vacuole3.27E-04
36GO:0007264: small GTPase mediated signal transduction3.90E-04
37GO:0008202: steroid metabolic process4.98E-04
38GO:0009727: detection of ethylene stimulus6.30E-04
39GO:0006672: ceramide metabolic process6.30E-04
40GO:0043066: negative regulation of apoptotic process6.30E-04
41GO:0006850: mitochondrial pyruvate transport6.30E-04
42GO:0007584: response to nutrient6.30E-04
43GO:0015865: purine nucleotide transport6.30E-04
44GO:0019441: tryptophan catabolic process to kynurenine6.30E-04
45GO:0006501: C-terminal protein lipidation6.30E-04
46GO:0080183: response to photooxidative stress6.30E-04
47GO:0015914: phospholipid transport6.30E-04
48GO:0050684: regulation of mRNA processing6.30E-04
49GO:0006468: protein phosphorylation7.28E-04
50GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.02E-03
51GO:0032784: regulation of DNA-templated transcription, elongation1.02E-03
52GO:0010359: regulation of anion channel activity1.02E-03
53GO:0002230: positive regulation of defense response to virus by host1.02E-03
54GO:0009410: response to xenobiotic stimulus1.02E-03
55GO:0009863: salicylic acid mediated signaling pathway1.34E-03
56GO:0009052: pentose-phosphate shunt, non-oxidative branch1.46E-03
57GO:0046902: regulation of mitochondrial membrane permeability1.46E-03
58GO:0072334: UDP-galactose transmembrane transport1.46E-03
59GO:0006612: protein targeting to membrane1.46E-03
60GO:0009399: nitrogen fixation1.46E-03
61GO:1902290: positive regulation of defense response to oomycetes1.46E-03
62GO:0010116: positive regulation of abscisic acid biosynthetic process1.46E-03
63GO:0034219: carbohydrate transmembrane transport1.46E-03
64GO:0009814: defense response, incompatible interaction1.77E-03
65GO:0006012: galactose metabolic process1.93E-03
66GO:0010107: potassium ion import1.96E-03
67GO:0033358: UDP-L-arabinose biosynthetic process1.96E-03
68GO:0010363: regulation of plant-type hypersensitive response1.96E-03
69GO:0022622: root system development1.96E-03
70GO:0080142: regulation of salicylic acid biosynthetic process1.96E-03
71GO:0044804: nucleophagy1.96E-03
72GO:0006542: glutamine biosynthetic process1.96E-03
73GO:0010222: stem vascular tissue pattern formation1.96E-03
74GO:0045227: capsule polysaccharide biosynthetic process1.96E-03
75GO:0046345: abscisic acid catabolic process1.96E-03
76GO:0010118: stomatal movement2.45E-03
77GO:0000422: mitophagy2.50E-03
78GO:0005513: detection of calcium ion2.50E-03
79GO:0006461: protein complex assembly2.50E-03
80GO:0007029: endoplasmic reticulum organization2.50E-03
81GO:0010225: response to UV-C2.50E-03
82GO:0061025: membrane fusion2.84E-03
83GO:0006970: response to osmotic stress2.87E-03
84GO:0019252: starch biosynthetic process3.04E-03
85GO:0000045: autophagosome assembly3.08E-03
86GO:1902456: regulation of stomatal opening3.08E-03
87GO:1900425: negative regulation of defense response to bacterium3.08E-03
88GO:0002238: response to molecule of fungal origin3.08E-03
89GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.08E-03
90GO:0048232: male gamete generation3.08E-03
91GO:0009630: gravitropism3.48E-03
92GO:0016310: phosphorylation3.51E-03
93GO:0009742: brassinosteroid mediated signaling pathway3.66E-03
94GO:0071470: cellular response to osmotic stress3.71E-03
95GO:0042372: phylloquinone biosynthetic process3.71E-03
96GO:0000911: cytokinesis by cell plate formation3.71E-03
97GO:0009612: response to mechanical stimulus3.71E-03
98GO:0048280: vesicle fusion with Golgi apparatus3.71E-03
99GO:0098655: cation transmembrane transport3.71E-03
100GO:0016192: vesicle-mediated transport3.84E-03
101GO:0046777: protein autophosphorylation3.94E-03
102GO:0000338: protein deneddylation4.38E-03
103GO:1900057: positive regulation of leaf senescence4.38E-03
104GO:0006400: tRNA modification4.38E-03
105GO:1902074: response to salt4.38E-03
106GO:0050790: regulation of catalytic activity4.38E-03
107GO:0009816: defense response to bacterium, incompatible interaction4.97E-03
108GO:0010928: regulation of auxin mediated signaling pathway5.08E-03
109GO:0043068: positive regulation of programmed cell death5.08E-03
110GO:0006605: protein targeting5.08E-03
111GO:1900150: regulation of defense response to fungus5.08E-03
112GO:2000070: regulation of response to water deprivation5.08E-03
113GO:0006906: vesicle fusion5.25E-03
114GO:0009808: lignin metabolic process5.82E-03
115GO:0006972: hyperosmotic response5.82E-03
116GO:0009821: alkaloid biosynthetic process6.60E-03
117GO:0051865: protein autoubiquitination6.60E-03
118GO:0010112: regulation of systemic acquired resistance6.60E-03
119GO:0007338: single fertilization6.60E-03
120GO:0015031: protein transport7.29E-03
121GO:0010449: root meristem growth7.41E-03
122GO:1900426: positive regulation of defense response to bacterium7.41E-03
123GO:0009867: jasmonic acid mediated signaling pathway7.78E-03
124GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process7.87E-03
125GO:0006896: Golgi to vacuole transport8.26E-03
126GO:0051026: chiasma assembly8.26E-03
127GO:0009617: response to bacterium8.54E-03
128GO:0052544: defense response by callose deposition in cell wall9.14E-03
129GO:0015770: sucrose transport9.14E-03
130GO:0030148: sphingolipid biosynthetic process9.14E-03
131GO:0000038: very long-chain fatty acid metabolic process9.14E-03
132GO:0006887: exocytosis9.26E-03
133GO:0012501: programmed cell death1.01E-02
134GO:0051707: response to other organism1.01E-02
135GO:0006626: protein targeting to mitochondrion1.10E-02
136GO:0006807: nitrogen compound metabolic process1.10E-02
137GO:2000028: regulation of photoperiodism, flowering1.10E-02
138GO:0002237: response to molecule of bacterial origin1.20E-02
139GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.22E-02
140GO:0007031: peroxisome organization1.30E-02
141GO:0005985: sucrose metabolic process1.30E-02
142GO:0007033: vacuole organization1.30E-02
143GO:0009225: nucleotide-sugar metabolic process1.30E-02
144GO:0009809: lignin biosynthetic process1.36E-02
145GO:0000162: tryptophan biosynthetic process1.40E-02
146GO:0009738: abscisic acid-activated signaling pathway1.46E-02
147GO:0016575: histone deacetylation1.62E-02
148GO:0006874: cellular calcium ion homeostasis1.62E-02
149GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.63E-02
150GO:0035556: intracellular signal transduction1.66E-02
151GO:0048278: vesicle docking1.73E-02
152GO:0015992: proton transport1.73E-02
153GO:0007131: reciprocal meiotic recombination1.85E-02
154GO:0030433: ubiquitin-dependent ERAD pathway1.85E-02
155GO:0007005: mitochondrion organization1.85E-02
156GO:0031348: negative regulation of defense response1.85E-02
157GO:0071456: cellular response to hypoxia1.85E-02
158GO:0045454: cell redox homeostasis1.96E-02
159GO:0071369: cellular response to ethylene stimulus1.96E-02
160GO:0009737: response to abscisic acid1.97E-02
161GO:0018105: peptidyl-serine phosphorylation2.00E-02
162GO:0006886: intracellular protein transport2.04E-02
163GO:0019722: calcium-mediated signaling2.08E-02
164GO:0055085: transmembrane transport2.19E-02
165GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.21E-02
166GO:0042147: retrograde transport, endosome to Golgi2.21E-02
167GO:0006952: defense response2.31E-02
168GO:0042631: cellular response to water deprivation2.33E-02
169GO:0042391: regulation of membrane potential2.33E-02
170GO:0010087: phloem or xylem histogenesis2.33E-02
171GO:0032259: methylation2.42E-02
172GO:0071472: cellular response to salt stress2.46E-02
173GO:0010305: leaf vascular tissue pattern formation2.46E-02
174GO:0046323: glucose import2.46E-02
175GO:0042752: regulation of circadian rhythm2.59E-02
176GO:0009646: response to absence of light2.59E-02
177GO:0009851: auxin biosynthetic process2.72E-02
178GO:0071554: cell wall organization or biogenesis2.86E-02
179GO:0006891: intra-Golgi vesicle-mediated transport2.86E-02
180GO:0016032: viral process3.00E-02
181GO:0006633: fatty acid biosynthetic process3.05E-02
182GO:0046686: response to cadmium ion3.06E-02
183GO:0006914: autophagy3.28E-02
184GO:0006310: DNA recombination3.28E-02
185GO:0009567: double fertilization forming a zygote and endosperm3.28E-02
186GO:0010150: leaf senescence3.35E-02
187GO:0009615: response to virus3.72E-02
188GO:0006470: protein dephosphorylation3.82E-02
189GO:0007166: cell surface receptor signaling pathway3.82E-02
190GO:0009607: response to biotic stimulus3.86E-02
191GO:0009734: auxin-activated signaling pathway3.91E-02
192GO:0009627: systemic acquired resistance4.02E-02
193GO:0042128: nitrate assimilation4.02E-02
194GO:0006888: ER to Golgi vesicle-mediated transport4.17E-02
195GO:0042742: defense response to bacterium4.33E-02
196GO:0030244: cellulose biosynthetic process4.49E-02
197GO:0008219: cell death4.49E-02
198GO:0009651: response to salt stress4.56E-02
199GO:0009832: plant-type cell wall biogenesis4.65E-02
200GO:0010311: lateral root formation4.65E-02
201GO:0006499: N-terminal protein myristoylation4.81E-02
202GO:0010119: regulation of stomatal movement4.97E-02
203GO:0009631: cold acclimation4.97E-02
204GO:0007568: aging4.97E-02
RankGO TermAdjusted P value
1GO:0003837: beta-ureidopropionase activity0.00E+00
2GO:0015591: D-ribose transmembrane transporter activity0.00E+00
3GO:0015148: D-xylose transmembrane transporter activity0.00E+00
4GO:0015575: mannitol transmembrane transporter activity0.00E+00
5GO:0004157: dihydropyrimidinase activity0.00E+00
6GO:0005092: GDP-dissociation inhibitor activity0.00E+00
7GO:0004846: urate oxidase activity0.00E+00
8GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
9GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
10GO:0015576: sorbitol transmembrane transporter activity0.00E+00
11GO:0016301: kinase activity5.02E-06
12GO:0005093: Rab GDP-dissociation inhibitor activity1.35E-05
13GO:0004674: protein serine/threonine kinase activity4.06E-05
14GO:0004040: amidase activity8.61E-05
15GO:0004747: ribokinase activity1.71E-04
16GO:0005484: SNAP receptor activity2.02E-04
17GO:0008865: fructokinase activity2.83E-04
18GO:0033984: indole-3-glycerol-phosphate lyase activity2.87E-04
19GO:0015208: guanine transmembrane transporter activity2.87E-04
20GO:0015294: solute:cation symporter activity2.87E-04
21GO:0008909: isochorismate synthase activity2.87E-04
22GO:0015207: adenine transmembrane transporter activity2.87E-04
23GO:0015168: glycerol transmembrane transporter activity2.87E-04
24GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.87E-04
25GO:0008142: oxysterol binding3.49E-04
26GO:0005524: ATP binding5.15E-04
27GO:0045140: inositol phosphoceramide synthase activity6.30E-04
28GO:0032934: sterol binding6.30E-04
29GO:0004061: arylformamidase activity6.30E-04
30GO:0004566: beta-glucuronidase activity6.30E-04
31GO:0050833: pyruvate transmembrane transporter activity1.02E-03
32GO:0004751: ribose-5-phosphate isomerase activity1.02E-03
33GO:0004663: Rab geranylgeranyltransferase activity1.02E-03
34GO:0016805: dipeptidase activity1.02E-03
35GO:0016595: glutamate binding1.02E-03
36GO:0008430: selenium binding1.02E-03
37GO:0000149: SNARE binding1.21E-03
38GO:0005354: galactose transmembrane transporter activity1.46E-03
39GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.46E-03
40GO:0015210: uracil transmembrane transporter activity1.96E-03
41GO:0019776: Atg8 ligase activity1.96E-03
42GO:0050373: UDP-arabinose 4-epimerase activity1.96E-03
43GO:0004834: tryptophan synthase activity1.96E-03
44GO:0005459: UDP-galactose transmembrane transporter activity2.50E-03
45GO:0015145: monosaccharide transmembrane transporter activity2.50E-03
46GO:0017137: Rab GTPase binding2.50E-03
47GO:0005496: steroid binding2.50E-03
48GO:0005471: ATP:ADP antiporter activity2.50E-03
49GO:0004356: glutamate-ammonia ligase activity2.50E-03
50GO:0010294: abscisic acid glucosyltransferase activity2.50E-03
51GO:0036402: proteasome-activating ATPase activity3.08E-03
52GO:0004709: MAP kinase kinase kinase activity3.08E-03
53GO:0015035: protein disulfide oxidoreductase activity3.53E-03
54GO:0102391: decanoate--CoA ligase activity3.71E-03
55GO:0003978: UDP-glucose 4-epimerase activity3.71E-03
56GO:0019900: kinase binding3.71E-03
57GO:0061630: ubiquitin protein ligase activity3.84E-03
58GO:0004467: long-chain fatty acid-CoA ligase activity4.38E-03
59GO:0008506: sucrose:proton symporter activity4.38E-03
60GO:0008235: metalloexopeptidase activity4.38E-03
61GO:0004034: aldose 1-epimerase activity5.08E-03
62GO:0052747: sinapyl alcohol dehydrogenase activity5.08E-03
63GO:0004033: aldo-keto reductase (NADP) activity5.08E-03
64GO:0009931: calcium-dependent protein serine/threonine kinase activity5.25E-03
65GO:0004683: calmodulin-dependent protein kinase activity5.54E-03
66GO:0015144: carbohydrate transmembrane transporter activity5.68E-03
67GO:0005267: potassium channel activity5.82E-03
68GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.82E-03
69GO:0005096: GTPase activator activity6.45E-03
70GO:0071949: FAD binding6.60E-03
71GO:0005351: sugar:proton symporter activity6.62E-03
72GO:0030145: manganese ion binding7.10E-03
73GO:0030955: potassium ion binding7.41E-03
74GO:0016844: strictosidine synthase activity7.41E-03
75GO:0004743: pyruvate kinase activity7.41E-03
76GO:0004713: protein tyrosine kinase activity8.26E-03
77GO:0008171: O-methyltransferase activity8.26E-03
78GO:0005516: calmodulin binding8.66E-03
79GO:0005543: phospholipid binding9.14E-03
80GO:0008794: arsenate reductase (glutaredoxin) activity9.14E-03
81GO:0004177: aminopeptidase activity9.14E-03
82GO:0045551: cinnamyl-alcohol dehydrogenase activity1.01E-02
83GO:0000175: 3'-5'-exoribonuclease activity1.10E-02
84GO:0004535: poly(A)-specific ribonuclease activity1.20E-02
85GO:0017025: TBP-class protein binding1.30E-02
86GO:0004970: ionotropic glutamate receptor activity1.30E-02
87GO:0005217: intracellular ligand-gated ion channel activity1.30E-02
88GO:0030552: cAMP binding1.30E-02
89GO:0030553: cGMP binding1.30E-02
90GO:0004725: protein tyrosine phosphatase activity1.40E-02
91GO:0008234: cysteine-type peptidase activity1.51E-02
92GO:0004407: histone deacetylase activity1.51E-02
93GO:0005216: ion channel activity1.62E-02
94GO:0004540: ribonuclease activity1.73E-02
95GO:0008408: 3'-5' exonuclease activity1.73E-02
96GO:0022857: transmembrane transporter activity1.82E-02
97GO:0005515: protein binding2.04E-02
98GO:0016491: oxidoreductase activity2.31E-02
99GO:0030551: cyclic nucleotide binding2.33E-02
100GO:0005249: voltage-gated potassium channel activity2.33E-02
101GO:0001085: RNA polymerase II transcription factor binding2.46E-02
102GO:0005355: glucose transmembrane transporter activity2.59E-02
103GO:0010181: FMN binding2.59E-02
104GO:0016853: isomerase activity2.59E-02
105GO:0004872: receptor activity2.72E-02
106GO:0009055: electron carrier activity2.79E-02
107GO:0004197: cysteine-type endopeptidase activity3.00E-02
108GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.12E-02
109GO:0016791: phosphatase activity3.28E-02
110GO:0016597: amino acid binding3.57E-02
111GO:0016413: O-acetyltransferase activity3.57E-02
112GO:0051213: dioxygenase activity3.72E-02
113GO:0008194: UDP-glycosyltransferase activity3.74E-02
114GO:0005509: calcium ion binding3.86E-02
115GO:0004721: phosphoprotein phosphatase activity4.17E-02
116GO:0004806: triglyceride lipase activity4.17E-02
117GO:0008236: serine-type peptidase activity4.33E-02
118GO:0008168: methyltransferase activity4.96E-02
119GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.97E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane7.35E-09
2GO:0005886: plasma membrane7.80E-07
3GO:0005829: cytosol7.99E-06
4GO:0005968: Rab-protein geranylgeranyltransferase complex3.03E-05
5GO:0030014: CCR4-NOT complex2.87E-04
6GO:0005778: peroxisomal membrane4.97E-04
7GO:0005794: Golgi apparatus5.11E-04
8GO:0034274: Atg12-Atg5-Atg16 complex6.30E-04
9GO:0016020: membrane7.33E-04
10GO:0031902: late endosome membrane1.34E-03
11GO:0031201: SNARE complex1.34E-03
12GO:0030658: transport vesicle membrane1.46E-03
13GO:0031461: cullin-RING ubiquitin ligase complex1.46E-03
14GO:0005741: mitochondrial outer membrane1.62E-03
15GO:0000164: protein phosphatase type 1 complex2.50E-03
16GO:0005802: trans-Golgi network2.87E-03
17GO:0030140: trans-Golgi network transport vesicle3.08E-03
18GO:0005789: endoplasmic reticulum membrane3.50E-03
19GO:0005768: endosome3.70E-03
20GO:0031597: cytosolic proteasome complex3.71E-03
21GO:0030173: integral component of Golgi membrane3.71E-03
22GO:0000794: condensed nuclear chromosome4.38E-03
23GO:0031595: nuclear proteasome complex4.38E-03
24GO:0031305: integral component of mitochondrial inner membrane5.08E-03
25GO:0012507: ER to Golgi transport vesicle membrane5.08E-03
26GO:0045273: respiratory chain complex II5.08E-03
27GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)5.08E-03
28GO:0034045: pre-autophagosomal structure membrane5.82E-03
29GO:0008180: COP9 signalosome6.60E-03
30GO:0031901: early endosome membrane6.60E-03
31GO:0008540: proteasome regulatory particle, base subcomplex7.41E-03
32GO:0005783: endoplasmic reticulum7.49E-03
33GO:0017119: Golgi transport complex8.26E-03
34GO:0005773: vacuole8.80E-03
35GO:0005765: lysosomal membrane9.14E-03
36GO:0005764: lysosome1.20E-02
37GO:0030176: integral component of endoplasmic reticulum membrane1.30E-02
38GO:0000502: proteasome complex1.36E-02
39GO:0012505: endomembrane system1.88E-02
40GO:0005777: peroxisome1.89E-02
41GO:0000790: nuclear chromatin2.21E-02
42GO:0005770: late endosome2.46E-02
43GO:0009524: phragmoplast2.56E-02
44GO:0009504: cell plate2.72E-02
45GO:0032580: Golgi cisterna membrane3.28E-02
46GO:0005887: integral component of plasma membrane3.73E-02
47GO:0005667: transcription factor complex4.02E-02
48GO:0000151: ubiquitin ligase complex4.49E-02
49GO:0000325: plant-type vacuole4.97E-02
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Gene type



Gene DE type